RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 CANXP27824 592 aaKnown RBP7.75□□□□□ -1.17
CCDC65-204ENST00000552188 RIPK4P57078 832 aa7.75□□□□□ -1.17
CCDC65-204ENST00000552188 CCDC146Q8IYE0 955 aa7.75□□□□□ -1.17
CCDC65-204ENST00000552188 NLGN1Q8N2Q7 840 aa7.75□□□□□ -1.17
CCDC65-204ENST00000552188 PNISRQ8TF01 805 aaKnown RBP7.75□□□□□ -1.17
CCDC65-204ENST00000552188 ARHGEF1Q92888 912 aaKnown RBP7.75□□□□□ -1.17
CCDC65-204ENST00000552188 RUNDC1Q96C34 613 aa7.75□□□□□ -1.17
CCDC65-204ENST00000552188 PLEKHF1Q96S99 279 aa7.75□□□□□ -1.17
CCDC65-204ENST00000552188 SYT17Q9BSW7 474 aa7.75□□□□□ -1.17
CCDC65-204ENST00000552188 PARP3Q9Y6F1 533 aa7.75□□□□□ -1.17
CCDC65-204ENST00000552188 CHD4Q14839 1912 aa7.75□□□□□ -1.17
CCDC65-204ENST00000552188 CEMIPQ8WUJ3 1361 aa7.74□□□□□ -1.17
CCDC65-204ENST00000552188 HEG1Q9ULI3 1381 aa7.74□□□□□ -1.17
CCDC65-204ENST00000552188 CYP19A1P11511 503 aaPredicted RBP7.74□□□□□ -1.17
CCDC65-204ENST00000552188 ATN1P54259 1190 aaPredicted RBP7.74□□□□□ -1.17
CCDC65-204ENST00000552188 SPRYD3Q8NCJ5 442 aa7.74□□□□□ -1.17
CCDC65-204ENST00000552188 ZNF496Q96IT1 587 aaPredicted RBP7.74□□□□□ -1.17
CCDC65-204ENST00000552188 DCBLD2Q96PD2 775 aa7.74□□□□□ -1.17
CCDC65-204ENST00000552188 TRIM35Q9UPQ4 493 aa7.74□□□□□ -1.17
CCDC65-204ENST00000552188 A0A087WZG4 1122 aa7.73□□□□□ -1.17
CCDC65-204ENST00000552188 ATMINO43313 823 aaPredicted RBP7.73□□□□□ -1.17
CCDC65-204ENST00000552188 TMPOP42166 694 aaKnown RBP7.73□□□□□ -1.17
CCDC65-204ENST00000552188 GPR162Q16538 588 aa7.73□□□□□ -1.17
CCDC65-204ENST00000552188 AMIGO3Q86WK7 504 aa7.73□□□□□ -1.17
CCDC65-204ENST00000552188 MIS18AQ9NYP9 233 aa7.73□□□□□ -1.17
CCDC65-204ENST00000552188 ADAMTS8Q9UP79 889 aa7.73□□□□□ -1.17
CCDC65-204ENST00000552188 ZBTB1Q9Y2K1 713 aa7.73□□□□□ -1.17
CCDC65-204ENST00000552188 RRP7AQ9Y3A4 280 aaKnown RBP7.73□□□□□ -1.17
CCDC65-204ENST00000552188 LAS1LQ9Y4W2 734 aaKnown RBP7.73□□□□□ -1.17
CCDC65-204ENST00000552188 N4BP2Q86UW6 1770 aaPredicted RBP7.73□□□□□ -1.17
CCDC65-204ENST00000552188 AFDNP55196 1824 aaKnown RBP7.73□□□□□ -1.17
CCDC65-204ENST00000552188 COL15A1P39059 1388 aa7.72□□□□□ -1.17
CCDC65-204ENST00000552188 KCNQ3O43525 872 aa7.72□□□□□ -1.17
CCDC65-204ENST00000552188 MMP10P09238 476 aa7.72□□□□□ -1.17
CCDC65-204ENST00000552188 SNRPA1P09661 255 aaKnown RBP7.72□□□□□ -1.17
CCDC65-204ENST00000552188 TPRNQ4KMQ1 711 aa7.72□□□□□ -1.17
CCDC65-204ENST00000552188 INTS5Q6P9B9 1019 aaKnown RBP7.72□□□□□ -1.17
CCDC65-204ENST00000552188 THUMPD2Q9BTF0 503 aaKnown RBP7.72□□□□□ -1.17
CCDC65-204ENST00000552188 MRS2Q9HD23 443 aa7.72□□□□□ -1.17
CCDC65-204ENST00000552188 SRP68Q9UHB9 627 aaKnown RBP7.72□□□□□ -1.17
CCDC65-204ENST00000552188 TSPYL4Q9UJ04 414 aa7.72□□□□□ -1.17
CCDC65-204ENST00000552188 CD2APQ9Y5K6 639 aa7.72□□□□□ -1.17
CCDC65-204ENST00000552188 SOS1Q07889 1333 aaPredicted RBP7.72□□□□□ -1.17
CCDC65-204ENST00000552188 NPHP1O15259 732 aa7.71□□□□□ -1.18
CCDC65-204ENST00000552188 GTPBP6O43824 516 aaPredicted RBP7.71□□□□□ -1.18
CCDC65-204ENST00000552188 A1BGP04217 495 aa7.71□□□□□ -1.18
CCDC65-204ENST00000552188 GYS1P13807 737 aa7.71□□□□□ -1.18
CCDC65-204ENST00000552188 MKRN3Q13064 507 aaKnown RBP7.71□□□□□ -1.18
CCDC65-204ENST00000552188 USPL1Q5W0Q7 1092 aa7.71□□□□□ -1.18
CCDC65-204ENST00000552188 USP42Q9H9J4 1324 aaKnown RBP7.71□□□□□ -1.18
CCDC65-204ENST00000552188 KIF13BQ9NQT8 1826 aa7.71□□□□□ -1.18
CCDC65-204ENST00000552188 CACNA1SQ13698 1873 aa7.7□□□□□ -1.18
CCDC65-204ENST00000552188 BCORQ6W2J9 1755 aa7.7□□□□□ -1.18
CCDC65-204ENST00000552188 TULP1O00294 542 aaPredicted RBP7.7□□□□□ -1.18
CCDC65-204ENST00000552188 APAF1O14727 1248 aa7.7□□□□□ -1.18
CCDC65-204ENST00000552188 IL6STP40189 918 aaPredicted RBP7.7□□□□□ -1.18
CCDC65-204ENST00000552188 CALD1Q05682 793 aaKnown RBP7.7□□□□□ -1.18
CCDC65-204ENST00000552188 ASTLQ6HA08 431 aaPredicted RBP7.7□□□□□ -1.18
CCDC65-204ENST00000552188 BICDL1Q6ZP65 573 aa7.7□□□□□ -1.18
CCDC65-204ENST00000552188 NLGN2Q8NFZ4 835 aa7.7□□□□□ -1.18
CCDC65-204ENST00000552188 MFRPQ9BY79 579 aa7.7□□□□□ -1.18
CCDC65-204ENST00000552188 NARFQ9UHQ1 456 aa7.7□□□□□ -1.18
CCDC65-204ENST00000552188 USP16Q9Y5T5 823 aa7.7□□□□□ -1.18
CCDC65-204ENST00000552188 NUP98P52948 1817 aa7.7□□□□□ -1.18
CCDC65-204ENST00000552188 SCN7AQ01118 1682 aa7.7□□□□□ -1.18
CCDC65-204ENST00000552188 PRAMEF22A3QJZ6 481 aa7.69□□□□□ -1.18
CCDC65-204ENST00000552188 PIP4K2AP48426 406 aaPredicted RBP7.69□□□□□ -1.18
CCDC65-204ENST00000552188 EIF5P55010 431 aaKnown RBP7.69□□□□□ -1.18
CCDC65-204ENST00000552188 DZIP3Q86Y13 1208 aaKnown RBP7.69□□□□□ -1.18
CCDC65-204ENST00000552188 HOMEZQ8IX15 550 aa7.69□□□□□ -1.18
CCDC65-204ENST00000552188 NGEFQ8N5V2 710 aa7.69□□□□□ -1.18
CCDC65-204ENST00000552188 TBC1D2BQ9UPU7 963 aa7.69□□□□□ -1.18
CCDC65-204ENST00000552188 ZNF652Q9Y2D9 606 aa7.69□□□□□ -1.18
CCDC65-204ENST00000552188 GRIN3BO60391 1043 aa7.68□□□□□ -1.18
CCDC65-204ENST00000552188 POTEIP0CG38 1075 aa7.68□□□□□ -1.18
CCDC65-204ENST00000552188 EIF2S2P20042 333 aaKnown RBP7.68□□□□□ -1.18
CCDC65-204ENST00000552188 YY1P25490 414 aa7.68□□□□□ -1.18
CCDC65-204ENST00000552188 EIF4A1P60842 406 aaKnown RBP7.68□□□□□ -1.18
CCDC65-204ENST00000552188 TGFB2P61812 414 aa7.68□□□□□ -1.18
CCDC65-204ENST00000552188 BABAM1Q9NWV8 329 aa7.68□□□□□ -1.18
CCDC65-204ENST00000552188 GIGYF1O75420 1035 aaPredicted RBP7.67□□□□□ -1.18
CCDC65-204ENST00000552188 SERPINB2P05120 415 aa7.67□□□□□ -1.18
CCDC65-204ENST00000552188 MYL6BP14649 208 aa7.67□□□□□ -1.18
CCDC65-204ENST00000552188 CCDC184Q52MB2 194 aa7.67□□□□□ -1.18
CCDC65-204ENST00000552188 KIF6Q6ZMV9 814 aa7.67□□□□□ -1.18
CCDC65-204ENST00000552188 FAM9BQ8IZU0 186 aa7.67□□□□□ -1.18
CCDC65-204ENST00000552188 SETDB2Q96T68 719 aa7.67□□□□□ -1.18
CCDC65-204ENST00000552188 WWC3Q9ULE0 1092 aa7.67□□□□□ -1.18
CCDC65-204ENST00000552188 ARFGEF1Q9Y6D6 1849 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 BRCA1P38398 1863 aaKnown RBP7.66□□□□□ -1.18
CCDC65-204ENST00000552188 CCDC88AQ3V6T2 1871 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 SENP3-EIF4A1A0A087X0R7 540 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 GTF2E1P29083 439 aaPredicted RBP7.66□□□□□ -1.18
CCDC65-204ENST00000552188 TM4SF1P30408 202 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 GNAI1P63096 354 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 NFIXQ14938 502 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 ERICH6Q7L0X2 663 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 NECTIN2Q92692 538 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 BCS1LQ9Y276 419 aa7.66□□□□□ -1.18
CCDC65-204ENST00000552188 SALL2Q9Y467 1007 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms