RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 CHMP4AQ9BY43 222 aa12.39□□□□□ -0.43
RAB5B-205ENST00000549034 TCERG1O14776 1098 aaKnown RBP12.38□□□□□ -0.43
RAB5B-205ENST00000549034 PROSER3Q2NL68 480 aa12.38□□□□□ -0.43
RAB5B-205ENST00000549034 CCDC30Q5VVM6 783 aa12.38□□□□□ -0.43
RAB5B-205ENST00000549034 BICDL1Q6ZP65 573 aa12.38□□□□□ -0.43
RAB5B-205ENST00000549034 DDX21Q9NR30 783 aaKnown RBP eCLIP12.38□□□□□ -0.43
RAB5B-205ENST00000549034 CHPF2Q9P2E5 772 aa12.38□□□□□ -0.43
RAB5B-205ENST00000549034 DBF4Q9UBU7 674 aaPredicted RBP12.38□□□□□ -0.43
RAB5B-205ENST00000549034 ERBB4Q15303 1308 aa12.37□□□□□ -0.43
RAB5B-205ENST00000549034 VAMP4O75379 141 aa12.37□□□□□ -0.43
RAB5B-205ENST00000549034 MMP10P09238 476 aa12.37□□□□□ -0.43
RAB5B-205ENST00000549034 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
RAB5B-205ENST00000549034 TTLL7Q6ZT98 887 aa12.37□□□□□ -0.43
RAB5B-205ENST00000549034 COPS6Q7L5N1 327 aa12.37□□□□□ -0.43
RAB5B-205ENST00000549034 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
RAB5B-205ENST00000549034 SGIP1Q9BQI5 828 aa12.37□□□□□ -0.43
RAB5B-205ENST00000549034 BCL2L12Q9HB09 334 aa12.37□□□□□ -0.43
RAB5B-205ENST00000549034 PARP3Q9Y6F1 533 aa12.37□□□□□ -0.43
RAB5B-205ENST00000549034 LAMB4A4D0S4 1761 aa12.36□□□□□ -0.43
RAB5B-205ENST00000549034 CAMTA2O94983 1202 aa12.36□□□□□ -0.43
RAB5B-205ENST00000549034 TM4SF1P30408 202 aa12.36□□□□□ -0.43
RAB5B-205ENST00000549034 DSG3P32926 999 aa12.36□□□□□ -0.43
RAB5B-205ENST00000549034 XAGE3Q8WTP9 111 aa12.36□□□□□ -0.43
RAB5B-205ENST00000549034 HYPKQ9NX55 129 aa12.36□□□□□ -0.43
RAB5B-205ENST00000549034 HLFQ16534 295 aa12.35□□□□□ -0.43
RAB5B-205ENST00000549034 TBC1D9BQ66K14 1250 aa12.35□□□□□ -0.43
RAB5B-205ENST00000549034 STK31Q9BXU1 1019 aa12.35□□□□□ -0.43
RAB5B-205ENST00000549034 ZBTB3Q9H5J0 574 aa12.35□□□□□ -0.43
RAB5B-205ENST00000549034 C4AP0C0L4 1744 aa12.34□□□□□ -0.43
RAB5B-205ENST00000549034 ERVV-1B6SEH8 477 aa12.34□□□□□ -0.43
RAB5B-205ENST00000549034 NFIXQ14938 502 aa12.34□□□□□ -0.43
RAB5B-205ENST00000549034 CLEC4GQ6UXB4 293 aa12.34□□□□□ -0.43
RAB5B-205ENST00000549034 LRP10Q7Z4F1 713 aa12.34□□□□□ -0.43
RAB5B-205ENST00000549034 TRMT2AQ8IZ69 625 aaKnown RBP12.34□□□□□ -0.43
RAB5B-205ENST00000549034 SETDB2Q96T68 719 aa12.34□□□□□ -0.43
RAB5B-205ENST00000549034 PHAXQ9H814 394 aaKnown RBP12.34□□□□□ -0.43
RAB5B-205ENST00000549034 ZNF652Q9Y2D9 606 aa12.34□□□□□ -0.43
RAB5B-205ENST00000549034 MAP3K15Q6ZN16 1313 aa12.34□□□□□ -0.43
RAB5B-205ENST00000549034 SERPINB2P05120 415 aa12.33□□□□□ -0.44
RAB5B-205ENST00000549034 ANKRD13DQ6ZTN6 518 aa12.33□□□□□ -0.44
RAB5B-205ENST00000549034 FHDC1Q9C0D6 1143 aaPredicted RBP12.33□□□□□ -0.44
RAB5B-205ENST00000549034 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
RAB5B-205ENST00000549034 POLRMTO00411 1230 aaKnown RBP12.32□□□□□ -0.44
RAB5B-205ENST00000549034 DDR1Q08345 913 aa12.32□□□□□ -0.44
RAB5B-205ENST00000549034 RIC3Q7Z5B4 369 aa12.32□□□□□ -0.44
RAB5B-205ENST00000549034 SYT17Q9BSW7 474 aa12.32□□□□□ -0.44
RAB5B-205ENST00000549034 NIP7Q9Y221 180 aaKnown RBP eCLIP12.32□□□□□ -0.44
RAB5B-205ENST00000549034 NPHP1O15259 732 aa12.31□□□□□ -0.44
RAB5B-205ENST00000549034 GIGYF2Q6Y7W6 1299 aaKnown RBP12.31□□□□□ -0.44
RAB5B-205ENST00000549034 PLBD2Q8NHP8 589 aa12.31□□□□□ -0.44
RAB5B-205ENST00000549034 COL24A1Q17RW2 1714 aa12.31□□□□□ -0.44
RAB5B-205ENST00000549034 NUP98P52948 1817 aa12.3□□□□□ -0.44
RAB5B-205ENST00000549034 DDX58O95786 925 aaKnown RBP12.3□□□□□ -0.44
RAB5B-205ENST00000549034 GPTP24298 496 aa12.3□□□□□ -0.44
RAB5B-205ENST00000549034 G2E3Q7L622 706 aa12.3□□□□□ -0.44
RAB5B-205ENST00000549034 LRP5O75197 1615 aa12.29□□□□□ -0.44
RAB5B-205ENST00000549034 CACNA1FO60840 1977 aa12.29□□□□□ -0.44
RAB5B-205ENST00000549034 RGL2O15211 777 aa12.29□□□□□ -0.44
RAB5B-205ENST00000549034 GTF2E1P29083 439 aaPredicted RBP12.29□□□□□ -0.44
RAB5B-205ENST00000549034 TCIRG1Q13488 830 aa12.29□□□□□ -0.44
RAB5B-205ENST00000549034 HSP90AB3PQ58FF7 597 aa12.29□□□□□ -0.44
RAB5B-205ENST00000549034 TPTE2Q6XPS3 522 aa12.29□□□□□ -0.44
RAB5B-205ENST00000549034 NBPF5PQ86XG9 351 aaPredicted RBP12.29□□□□□ -0.44
RAB5B-205ENST00000549034 ZNF34Q8IZ26 560 aa12.29□□□□□ -0.44
RAB5B-205ENST00000549034 CCDC24Q8N4L8 307 aa12.29□□□□□ -0.44
RAB5B-205ENST00000549034 YTHDC1Q96MU7 727 aaKnown RBP12.29□□□□□ -0.44
RAB5B-205ENST00000549034 CD2APQ9Y5K6 639 aa12.29□□□□□ -0.44
RAB5B-205ENST00000549034 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
RAB5B-205ENST00000549034 SUSD4Q5VX71 490 aa12.28□□□□□ -0.44
RAB5B-205ENST00000549034 KSR2Q6VAB6 950 aa12.28□□□□□ -0.44
RAB5B-205ENST00000549034 PI4KAP2A4QPH2 592 aa12.27□□□□□ -0.45
RAB5B-205ENST00000549034 ATP5J2-PTCD1G3V325 749 aa12.27□□□□□ -0.45
RAB5B-205ENST00000549034 ABCB7O75027 752 aa12.27□□□□□ -0.45
RAB5B-205ENST00000549034 FLIIQ13045 1269 aa12.27□□□□□ -0.45
RAB5B-205ENST00000549034 FKBP5Q13451 457 aaPredicted RBP12.27□□□□□ -0.45
RAB5B-205ENST00000549034 PPP1R42Q7Z4L9 355 aa12.27□□□□□ -0.45
RAB5B-205ENST00000549034 PI4KAP1Q8N8J0 262 aa12.27□□□□□ -0.45
RAB5B-205ENST00000549034 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
RAB5B-205ENST00000549034 ZNF428Q96B54 188 aa12.27□□□□□ -0.45
RAB5B-205ENST00000549034 MYD88Q99836 296 aa12.27□□□□□ -0.45
RAB5B-205ENST00000549034 MAP3K2Q9Y2U5 619 aa12.27□□□□□ -0.45
RAB5B-205ENST00000549034 BCORQ6W2J9 1755 aa12.26□□□□□ -0.45
RAB5B-205ENST00000549034 AFDNP55196 1824 aaKnown RBP12.26□□□□□ -0.45
RAB5B-205ENST00000549034 A0A0G2JLW4 131 aa12.26□□□□□ -0.45
RAB5B-205ENST00000549034 CT47B1P0C2W7 299 aaPredicted RBP12.26□□□□□ -0.45
RAB5B-205ENST00000549034 TGFB2P61812 414 aa12.26□□□□□ -0.45
RAB5B-205ENST00000549034 ST5P78524 1137 aa12.26□□□□□ -0.45
RAB5B-205ENST00000549034 PARP10Q53GL7 1025 aa12.26□□□□□ -0.45
RAB5B-205ENST00000549034 PRR5LQ6MZQ0 368 aa12.26□□□□□ -0.45
RAB5B-205ENST00000549034 MRPL50Q8N5N7 158 aaKnown RBP12.26□□□□□ -0.45
RAB5B-205ENST00000549034 CNBD1Q8NA66 436 aa12.26□□□□□ -0.45
RAB5B-205ENST00000549034 SSH1Q8WYL5 1049 aa12.26□□□□□ -0.45
RAB5B-205ENST00000549034 BCL2L13Q9BXK5 485 aa12.26□□□□□ -0.45
RAB5B-205ENST00000549034 NYXQ9GZU5 481 aa12.26□□□□□ -0.45
RAB5B-205ENST00000549034 CARMIL3Q8ND23 1372 aa12.26□□□□□ -0.45
RAB5B-205ENST00000549034 POLA2Q14181 598 aa12.25□□□□□ -0.45
RAB5B-205ENST00000549034 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
RAB5B-205ENST00000549034 NLRP10Q86W26 655 aa12.25□□□□□ -0.45
RAB5B-205ENST00000549034 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
RAB5B-205ENST00000549034 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms