RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 A0A087WZG4 1122 aa11.33□□□□□ -0.6
SP1-203ENST00000548560 EIF4A1P60842 406 aaKnown RBP11.33□□□□□ -0.6
SP1-203ENST00000548560 GNAI1P63096 354 aa11.33□□□□□ -0.6
SP1-203ENST00000548560 ARXQ96QS3 562 aa11.33□□□□□ -0.6
SP1-203ENST00000548560 USP42Q9H9J4 1324 aaKnown RBP11.33□□□□□ -0.6
SP1-203ENST00000548560 PRAMEF22A3QJZ6 481 aa11.32□□□□□ -0.6
SP1-203ENST00000548560 IL6STP40189 918 aaPredicted RBP11.32□□□□□ -0.6
SP1-203ENST00000548560 CCDC27Q2M243 656 aa11.32□□□□□ -0.6
SP1-203ENST00000548560 NLGN1Q8N2Q7 840 aa11.32□□□□□ -0.6
SP1-203ENST00000548560 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
SP1-203ENST00000548560 RYDENQ9NUL5 291 aaKnown RBP11.32□□□□□ -0.6
SP1-203ENST00000548560 IFT57Q9NWB7 429 aa11.32□□□□□ -0.6
SP1-203ENST00000548560 USP16Q9Y5T5 823 aa11.32□□□□□ -0.6
SP1-203ENST00000548560 AFDNP55196 1824 aaKnown RBP11.31□□□□□ -0.6
SP1-203ENST00000548560 SENP3-EIF4A1A0A087X0R7 540 aa11.31□□□□□ -0.6
SP1-203ENST00000548560 CHL1O00533 1208 aa11.31□□□□□ -0.6
SP1-203ENST00000548560 GIGYF1O75420 1035 aaPredicted RBP11.31□□□□□ -0.6
SP1-203ENST00000548560 A1BGP04217 495 aa11.31□□□□□ -0.6
SP1-203ENST00000548560 YY1P25490 414 aa11.31□□□□□ -0.6
SP1-203ENST00000548560 NGEFQ8N5V2 710 aa11.31□□□□□ -0.6
SP1-203ENST00000548560 GOLGB1Q14789 3259 aaKnown RBP11.31□□□□□ -0.6
SP1-203ENST00000548560 NUP98P52948 1817 aa11.3□□□□□ -0.6
SP1-203ENST00000548560 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
SP1-203ENST00000548560 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
SP1-203ENST00000548560 GYS1P13807 737 aa11.3□□□□□ -0.6
SP1-203ENST00000548560 EIF5P55010 431 aaKnown RBP11.3□□□□□ -0.6
SP1-203ENST00000548560 SRP68Q9UHB9 627 aaKnown RBP11.3□□□□□ -0.6
SP1-203ENST00000548560 NARFQ9UHQ1 456 aa11.3□□□□□ -0.6
SP1-203ENST00000548560 SALL2Q9Y467 1007 aaPredicted RBP11.3□□□□□ -0.6
SP1-203ENST00000548560 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
SP1-203ENST00000548560 MMP10P09238 476 aa11.29□□□□□ -0.6
SP1-203ENST00000548560 PIP4K2AP48426 406 aaPredicted RBP11.29□□□□□ -0.6
SP1-203ENST00000548560 USPL1Q5W0Q7 1092 aa11.29□□□□□ -0.6
SP1-203ENST00000548560 WWC1Q8IX03 1113 aa11.29□□□□□ -0.6
SP1-203ENST00000548560 FHDC1Q9C0D6 1143 aaPredicted RBP11.29□□□□□ -0.6
SP1-203ENST00000548560 MBIPQ9NS73 344 aa11.29□□□□□ -0.6
SP1-203ENST00000548560 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
SP1-203ENST00000548560 PARP3Q9Y6F1 533 aa11.29□□□□□ -0.6
SP1-203ENST00000548560 ERBB4Q15303 1308 aa11.29□□□□□ -0.6
SP1-203ENST00000548560 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
SP1-203ENST00000548560 GTPBP6O43824 516 aaPredicted RBP11.28□□□□□ -0.6
SP1-203ENST00000548560 HOXB7P09629 217 aa11.28□□□□□ -0.6
SP1-203ENST00000548560 EIF2S2P20042 333 aaKnown RBP11.28□□□□□ -0.6
SP1-203ENST00000548560 MNX1P50219 401 aaPredicted RBP11.28□□□□□ -0.6
SP1-203ENST00000548560 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
SP1-203ENST00000548560 RASEFQ8IZ41 740 aa11.28□□□□□ -0.6
SP1-203ENST00000548560 SYT17Q9BSW7 474 aa11.28□□□□□ -0.6
SP1-203ENST00000548560 ZNF652Q9Y2D9 606 aa11.28□□□□□ -0.6
SP1-203ENST00000548560 IL16Q14005 1332 aa11.28□□□□□ -0.6
SP1-203ENST00000548560 NRXN2Q9P2S2 1712 aa11.27□□□□□ -0.61
SP1-203ENST00000548560 N4BP2Q86UW6 1770 aaPredicted RBP11.27□□□□□ -0.61
SP1-203ENST00000548560 ZNF853P0CG23 659 aa11.27□□□□□ -0.61
SP1-203ENST00000548560 MYL6BP14649 208 aa11.27□□□□□ -0.61
SP1-203ENST00000548560 HDGFL1Q5TGJ6 251 aa11.27□□□□□ -0.61
SP1-203ENST00000548560 KIF6Q6ZMV9 814 aa11.27□□□□□ -0.61
SP1-203ENST00000548560 TBC1D2BQ9UPU7 963 aa11.27□□□□□ -0.61
SP1-203ENST00000548560 NBPF26B4DH59 902 aa11.26□□□□□ -0.61
SP1-203ENST00000548560 KRT24Q2M2I5 525 aa11.26□□□□□ -0.61
SP1-203ENST00000548560 DUSP27Q5VZP5 1158 aa11.26□□□□□ -0.61
SP1-203ENST00000548560 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
SP1-203ENST00000548560 WDR63Q8IWG1 891 aa11.26□□□□□ -0.61
SP1-203ENST00000548560 NBPF15Q8N660 670 aa11.26□□□□□ -0.61
SP1-203ENST00000548560 NECTIN2Q92692 538 aa11.26□□□□□ -0.61
SP1-203ENST00000548560 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
SP1-203ENST00000548560 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.25□□□□□ -0.61
SP1-203ENST00000548560 PYGBP11216 843 aa11.25□□□□□ -0.61
SP1-203ENST00000548560 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
SP1-203ENST00000548560 TSR2Q969E8 191 aaKnown RBP11.25□□□□□ -0.61
SP1-203ENST00000548560 ZFP91Q96JP5 570 aaPredicted RBP11.25□□□□□ -0.61
SP1-203ENST00000548560 CD2APQ9Y5K6 639 aa11.25□□□□□ -0.61
SP1-203ENST00000548560 CARMIL3Q8ND23 1372 aa11.25□□□□□ -0.61
SP1-203ENST00000548560 ARFGEF2Q9Y6D5 1785 aa11.24□□□□□ -0.61
SP1-203ENST00000548560 BRCA1P38398 1863 aaKnown RBP11.24□□□□□ -0.61
SP1-203ENST00000548560 NPHP1O15259 732 aa11.24□□□□□ -0.61
SP1-203ENST00000548560 CAMTA2O94983 1202 aa11.24□□□□□ -0.61
SP1-203ENST00000548560 NFIXQ14938 502 aa11.24□□□□□ -0.61
SP1-203ENST00000548560 BICDL1Q6ZP65 573 aa11.24□□□□□ -0.61
SP1-203ENST00000548560 MYH16Q9H6N6 1097 aa11.24□□□□□ -0.61
SP1-203ENST00000548560 BCL2L12Q9HB09 334 aa11.24□□□□□ -0.61
SP1-203ENST00000548560 C10orf71Q711Q0 1435 aa11.24□□□□□ -0.61
SP1-203ENST00000548560 KIAA1551Q9HCM1 1747 aa11.23□□□□□ -0.61
SP1-203ENST00000548560 DLEC1Q9Y238 1755 aa11.23□□□□□ -0.61
SP1-203ENST00000548560 POLRMTO00411 1230 aaKnown RBP11.23□□□□□ -0.61
SP1-203ENST00000548560 ELL2O00472 640 aaPredicted RBP11.23□□□□□ -0.61
SP1-203ENST00000548560 CLEC4GQ6UXB4 293 aa11.23□□□□□ -0.61
SP1-203ENST00000548560 SETDB2Q96T68 719 aa11.23□□□□□ -0.61
SP1-203ENST00000548560 DDX21Q9NR30 783 aaKnown RBP eCLIP11.23□□□□□ -0.61
SP1-203ENST00000548560 CHPF2Q9P2E5 772 aa11.23□□□□□ -0.61
SP1-203ENST00000548560 DBF4Q9UBU7 674 aaPredicted RBP11.23□□□□□ -0.61
SP1-203ENST00000548560 MAP3K15Q6ZN16 1313 aa11.23□□□□□ -0.61
SP1-203ENST00000548560 FANCIQ9NVI1 1328 aa11.23□□□□□ -0.61
SP1-203ENST00000548560 CACNA1SQ13698 1873 aa11.23□□□□□ -0.61
SP1-203ENST00000548560 ANKRD31Q8N7Z5 1873 aa11.23□□□□□ -0.61
SP1-203ENST00000548560 ERVV-1B6SEH8 477 aa11.22□□□□□ -0.61
SP1-203ENST00000548560 ANXA1P04083 346 aa11.22□□□□□ -0.61
SP1-203ENST00000548560 TM4SF1P30408 202 aa11.22□□□□□ -0.61
SP1-203ENST00000548560 DDR1Q08345 913 aa11.22□□□□□ -0.61
SP1-203ENST00000548560 GOLGA2Q08379 1002 aa11.22□□□□□ -0.61
SP1-203ENST00000548560 TBC1D9BQ66K14 1250 aa11.22□□□□□ -0.61
SP1-203ENST00000548560 SERPINB2P05120 415 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms