RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 SPINT1O43278 529 aa8.21□□□□□ -1.1
USP25-209ENST00000547201 INTS6LQ5JSJ4 861 aaKnown RBP8.21□□□□□ -1.1
USP25-209ENST00000547201 PNMA1Q8ND90 353 aa8.21□□□□□ -1.1
USP25-209ENST00000547201 OCSTAMPQ9BR26 566 aa8.21□□□□□ -1.1
USP25-209ENST00000547201 TMEM2Q9UHN6 1383 aa8.21□□□□□ -1.1
USP25-209ENST00000547201 ADAMTS13Q76LX8 1427 aa8.2□□□□□ -1.1
USP25-209ENST00000547201 PTSQ03393 145 aa8.2□□□□□ -1.1
USP25-209ENST00000547201 ADAM32Q8TC27 787 aa8.2□□□□□ -1.1
USP25-209ENST00000547201 LTBP4Q8N2S1 1624 aa8.2□□□□□ -1.1
USP25-209ENST00000547201 CCDC144AA2RUR9 1427 aa8.2□□□□□ -1.1
USP25-209ENST00000547201 ALKQ9UM73 1620 aa8.19□□□□□ -1.1
USP25-209ENST00000547201 FIGNL2A6NMB9 653 aa8.19□□□□□ -1.1
USP25-209ENST00000547201 USP17L8P0C7I0 530 aa8.19□□□□□ -1.1
USP25-209ENST00000547201 NBPF20Q3BBV1 942 aa8.19□□□□□ -1.1
USP25-209ENST00000547201 NPHP4O75161 1426 aaPredicted RBP8.19□□□□□ -1.1
USP25-209ENST00000547201 PTPRUQ92729 1446 aa8.19□□□□□ -1.1
USP25-209ENST00000547201 MED14O60244 1454 aa8.19□□□□□ -1.1
USP25-209ENST00000547201 SETBP1Q9Y6X0 1596 aa8.18□□□□□ -1.1
USP25-209ENST00000547201 XRN1Q8IZH2 1706 aaKnown RBP8.18□□□□□ -1.1
USP25-209ENST00000547201 EPS8L1Q8TE68 723 aa8.18□□□□□ -1.1
USP25-209ENST00000547201 ADGRF5Q8IZF2 1346 aa8.18□□□□□ -1.1
USP25-209ENST00000547201 ZNF335Q9H4Z2 1342 aaPredicted RBP8.18□□□□□ -1.1
USP25-209ENST00000547201 RELBQ01201 579 aa8.17□□□□□ -1.1
USP25-209ENST00000547201 AGBL1Q96MI9 1066 aa8.17□□□□□ -1.1
USP25-209ENST00000547201 HMX1Q9NP08 348 aaPredicted RBP8.17□□□□□ -1.1
USP25-209ENST00000547201 NRXN1Q9ULB1 1477 aa8.17□□□□□ -1.1
USP25-209ENST00000547201 NWD1Q149M9 1564 aa8.17□□□□□ -1.1
USP25-209ENST00000547201 ADGRB1O14514 1584 aa8.15□□□□□ -1.1
USP25-209ENST00000547201 PIK3C2GO75747 1445 aa8.15□□□□□ -1.1
USP25-209ENST00000547201 METP08581 1390 aa8.15□□□□□ -1.1
USP25-209ENST00000547201 RFC5P40937 340 aa8.15□□□□□ -1.1
USP25-209ENST00000547201 RGL3Q3MIN7 710 aa8.15□□□□□ -1.1
USP25-209ENST00000547201 DZIP3Q86Y13 1208 aaKnown RBP8.15□□□□□ -1.1
USP25-209ENST00000547201 CCDC155Q8N6L0 562 aa8.15□□□□□ -1.1
USP25-209ENST00000547201 INSM2Q96T92 566 aaPredicted RBP8.15□□□□□ -1.1
USP25-209ENST00000547201 CHD2O14647 1828 aaKnown RBP8.15□□□□□ -1.11
USP25-209ENST00000547201 NALCNQ8IZF0 1738 aa8.15□□□□□ -1.11
USP25-209ENST00000547201 TRPM1Q7Z4N2 1603 aa8.14□□□□□ -1.11
USP25-209ENST00000547201 MYOM2P54296 1465 aa8.14□□□□□ -1.11
USP25-209ENST00000547201 CTSOP43234 321 aaPredicted RBP8.14□□□□□ -1.11
USP25-209ENST00000547201 RAB15P59190 212 aa8.14□□□□□ -1.11
USP25-209ENST00000547201 GPR161Q8N6U8 529 aaKnown RBP8.14□□□□□ -1.11
USP25-209ENST00000547201 ZNF784Q8NCA9 323 aaPredicted RBP8.14□□□□□ -1.11
USP25-209ENST00000547201 NANOS1Q8WY41 292 aaKnown RBP8.14□□□□□ -1.11
USP25-209ENST00000547201 SLC26A8Q96RN1 970 aa8.14□□□□□ -1.11
USP25-209ENST00000547201 POLMQ9NP87 494 aaPredicted RBP8.14□□□□□ -1.11
USP25-209ENST00000547201 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
USP25-209ENST00000547201 PLEKHG1Q9ULL1 1385 aa8.13□□□□□ -1.11
USP25-209ENST00000547201 SLC35F4A4IF30 521 aa8.13□□□□□ -1.11
USP25-209ENST00000547201 ADH1AP07327 375 aa8.13□□□□□ -1.11
USP25-209ENST00000547201 KRT76Q01546 638 aa8.13□□□□□ -1.11
USP25-209ENST00000547201 TXNDC2Q86VQ3 553 aa8.13□□□□□ -1.11
USP25-209ENST00000547201 CNTNAP3BQ96NU0 1288 aa8.13□□□□□ -1.11
USP25-209ENST00000547201 CNTNAP3Q9BZ76 1288 aa8.13□□□□□ -1.11
USP25-209ENST00000547201 SLC52A1Q9NWF4 448 aa8.13□□□□□ -1.11
USP25-209ENST00000547201 ERVH48-1M5A8F1 160 aa8.12□□□□□ -1.11
USP25-209ENST00000547201 NEUROD1Q13562 356 aa8.12□□□□□ -1.11
USP25-209ENST00000547201 RNF217Q8TC41 542 aa8.12□□□□□ -1.11
USP25-209ENST00000547201 ZNF395Q9H8N7 513 aaPredicted RBP8.12□□□□□ -1.11
USP25-209ENST00000547201 DIP2AQ14689 1571 aa8.12□□□□□ -1.11
USP25-209ENST00000547201 ARHGEF28Q8N1W1 1705 aaKnown RBP8.12□□□□□ -1.11
USP25-209ENST00000547201 PLEKHH1Q9ULM0 1364 aa8.11□□□□□ -1.11
USP25-209ENST00000547201 ESPNB1AK53 854 aa8.11□□□□□ -1.11
USP25-209ENST00000547201 ITGA6P23229 1130 aa8.11□□□□□ -1.11
USP25-209ENST00000547201 NBPF8Q3BBV2 869 aa8.11□□□□□ -1.11
USP25-209ENST00000547201 ZNF326Q5BKZ1 582 aaKnown RBP8.11□□□□□ -1.11
USP25-209ENST00000547201 PCMTD1Q96MG8 357 aaPredicted RBP8.11□□□□□ -1.11
USP25-209ENST00000547201 COL25A1Q9BXS0 654 aaPredicted RBP8.11□□□□□ -1.11
USP25-209ENST00000547201 GOPCQ9HD26 462 aa8.11□□□□□ -1.11
USP25-209ENST00000547201 LRRC7Q96NW7 1537 aa8.11□□□□□ -1.11
USP25-209ENST00000547201 KNDC1Q76NI1 1749 aa8.11□□□□□ -1.11
USP25-209ENST00000547201 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.11□□□□□ -1.11
USP25-209ENST00000547201 PRAG1Q86YV5 1406 aa8.11□□□□□ -1.11
USP25-209ENST00000547201 LILRA1O75019 489 aa8.1□□□□□ -1.11
USP25-209ENST00000547201 SEPT12Q8IYM1 358 aa8.1□□□□□ -1.11
USP25-209ENST00000547201 THEMISQ8N1K5 641 aaPredicted RBP8.1□□□□□ -1.11
USP25-209ENST00000547201 L3MBTL2Q969R5 705 aa8.1□□□□□ -1.11
USP25-209ENST00000547201 TRIM34Q9BYJ4 488 aa8.1□□□□□ -1.11
USP25-209ENST00000547201 ROBO2Q9HCK4 1378 aa8.1□□□□□ -1.11
USP25-209ENST00000547201 CPS1P31327 1500 aa8.09□□□□□ -1.11
USP25-209ENST00000547201 CDC14CA4D256 554 aa8.09□□□□□ -1.11
USP25-209ENST00000547201 ADD1P35611 737 aaKnown RBP8.09□□□□□ -1.11
USP25-209ENST00000547201 PTGIRP43119 386 aa8.09□□□□□ -1.11
USP25-209ENST00000547201 TMEM259Q4ZIN3 620 aa8.09□□□□□ -1.11
USP25-209ENST00000547201 CFAP70Q5T0N1 1121 aa8.09□□□□□ -1.11
USP25-209ENST00000547201 LAMC1P11047 1609 aa8.09□□□□□ -1.11
USP25-209ENST00000547201 FOXD4L5Q5VV16 416 aaPredicted RBP8.08□□□□□ -1.12
USP25-209ENST00000547201 TMEM132EQ6IEE7 984 aa8.08□□□□□ -1.12
USP25-209ENST00000547201 SV2AQ7L0J3 742 aa8.08□□□□□ -1.12
USP25-209ENST00000547201 ANKLE2Q86XL3 938 aa8.08□□□□□ -1.12
USP25-209ENST00000547201 VWA5B2Q8N398 1253 aa8.08□□□□□ -1.12
USP25-209ENST00000547201 SENP3-EIF4A1A0A087X0R7 540 aa8.07□□□□□ -1.12
USP25-209ENST00000547201 PPP1R15AO75807 674 aaPredicted RBP8.07□□□□□ -1.12
USP25-209ENST00000547201 KCNA6P17658 529 aa8.07□□□□□ -1.12
USP25-209ENST00000547201 KCNMA1Q12791 1236 aa8.07□□□□□ -1.12
USP25-209ENST00000547201 NBPF1Q3BBV0 1214 aa8.07□□□□□ -1.12
USP25-209ENST00000547201 RNFT1Q5M7Z0 435 aa8.07□□□□□ -1.12
USP25-209ENST00000547201 KDF1Q8NAX2 398 aaPredicted RBP8.07□□□□□ -1.12
USP25-209ENST00000547201 DCAF11Q8TEB1 546 aa8.07□□□□□ -1.12
USP25-209ENST00000547201 CYLDQ9NQC7 956 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms