RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
USP25-209ENST00000547201 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
USP25-209ENST00000547201 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
USP25-209ENST00000547201 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
USP25-209ENST00000547201 FOXD1Q16676 465 aa19.13■□□□□ 0.65
USP25-209ENST00000547201 PLPPR3Q6T4P5 718 aa18.39■□□□□ 0.53
USP25-209ENST00000547201 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
USP25-209ENST00000547201 MSH5O43196 834 aa17.91■□□□□ 0.46
USP25-209ENST00000547201 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
USP25-209ENST00000547201 ADRA2BP18089 450 aa17.88■□□□□ 0.45
USP25-209ENST00000547201 POTEDQ86YR6 584 aa17.33■□□□□ 0.36
USP25-209ENST00000547201 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
USP25-209ENST00000547201 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
USP25-209ENST00000547201 DMRT2Q9Y5R5 561 aa16.31■□□□□ 0.2
USP25-209ENST00000547201 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
USP25-209ENST00000547201 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
USP25-209ENST00000547201 HOXD11P31277 338 aaPredicted RBP15.73■□□□□ 0.11
USP25-209ENST00000547201 DCAF8L1A6NGE4 600 aa15.65■□□□□ 0.1
USP25-209ENST00000547201 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
USP25-209ENST00000547201 NCBP3Q53F19 620 aaKnown RBP15.54■□□□□ 0.08
USP25-209ENST00000547201 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
USP25-209ENST00000547201 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
USP25-209ENST00000547201 RNF39Q9H2S5 420 aa15.26■□□□□ 0.03
USP25-209ENST00000547201 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
USP25-209ENST00000547201 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
USP25-209ENST00000547201 KCNA4P22459 653 aa15.05■□□□□ -0
USP25-209ENST00000547201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
USP25-209ENST00000547201 U3KPZ7 1027 aaPredicted RBP14.68□□□□□ -0.06
USP25-209ENST00000547201 SLC4A2P04920 1241 aa14.57□□□□□ -0.08
USP25-209ENST00000547201 CAPN15O75808 1086 aa14.44□□□□□ -0.1
USP25-209ENST00000547201 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
USP25-209ENST00000547201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
USP25-209ENST00000547201 APLP2Q06481 763 aa14.33□□□□□ -0.12
USP25-209ENST00000547201 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
USP25-209ENST00000547201 DSG3P32926 999 aa14.32□□□□□ -0.12
USP25-209ENST00000547201 SAMD1Q6SPF0 538 aaPredicted RBP14.24□□□□□ -0.13
USP25-209ENST00000547201 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
USP25-209ENST00000547201 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
USP25-209ENST00000547201 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
USP25-209ENST00000547201 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
USP25-209ENST00000547201 ABCB7O75027 752 aa14.09□□□□□ -0.15
USP25-209ENST00000547201 FOXD4L1Q9NU39 408 aa14.05□□□□□ -0.16
USP25-209ENST00000547201 POLA2Q14181 598 aa13.84□□□□□ -0.19
USP25-209ENST00000547201 ZBTB22O15209 634 aa13.82□□□□□ -0.2
USP25-209ENST00000547201 ATF5Q9Y2D1 282 aaPredicted RBP13.78□□□□□ -0.2
USP25-209ENST00000547201 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
USP25-209ENST00000547201 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
USP25-209ENST00000547201 POTEHQ6S545 545 aa13.61□□□□□ -0.23
USP25-209ENST00000547201 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
USP25-209ENST00000547201 NISCHQ9Y2I1 1504 aa13.55□□□□□ -0.24
USP25-209ENST00000547201 OSCARQ8IYS5 282 aa13.41□□□□□ -0.26
USP25-209ENST00000547201 AKT1S1Q96B36 256 aa13.38□□□□□ -0.27
USP25-209ENST00000547201 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
USP25-209ENST00000547201 FBLN2P98095 1184 aa13.3□□□□□ -0.28
USP25-209ENST00000547201 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
USP25-209ENST00000547201 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
USP25-209ENST00000547201 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
USP25-209ENST00000547201 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
USP25-209ENST00000547201 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
USP25-209ENST00000547201 MKRN4PQ13434 485 aaPredicted RBP13.17□□□□□ -0.3
USP25-209ENST00000547201 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
USP25-209ENST00000547201 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
USP25-209ENST00000547201 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
USP25-209ENST00000547201 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
USP25-209ENST00000547201 SSUH2Q9Y2M2 353 aa12.99□□□□□ -0.33
USP25-209ENST00000547201 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
USP25-209ENST00000547201 SPDYE1Q8NFV5 336 aaPredicted RBP12.93□□□□□ -0.34
USP25-209ENST00000547201 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
USP25-209ENST00000547201 PABPN1Q86U42 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
USP25-209ENST00000547201 HAX1O00165 279 aa12.79□□□□□ -0.36
USP25-209ENST00000547201 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
USP25-209ENST00000547201 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
USP25-209ENST00000547201 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
USP25-209ENST00000547201 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
USP25-209ENST00000547201 SPDYE4A6NLX3 237 aa12.61□□□□□ -0.39
USP25-209ENST00000547201 EVX2Q03828 476 aa12.6□□□□□ -0.39
USP25-209ENST00000547201 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
USP25-209ENST00000547201 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
USP25-209ENST00000547201 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.41
USP25-209ENST00000547201 CD44P16070 742 aaKnown RBP12.38□□□□□ -0.43
USP25-209ENST00000547201 CREBZFQ9NS37 354 aa12.38□□□□□ -0.43
USP25-209ENST00000547201 GABBR2O75899 941 aa12.34□□□□□ -0.43
USP25-209ENST00000547201 PROM2Q8N271 834 aa12.3□□□□□ -0.44
USP25-209ENST00000547201 CLCN6P51797 869 aa12.21□□□□□ -0.45
USP25-209ENST00000547201 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
USP25-209ENST00000547201 NPM1P06748 294 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP25-209ENST00000547201 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
USP25-209ENST00000547201 MNX1P50219 401 aaPredicted RBP12.17□□□□□ -0.46
USP25-209ENST00000547201 PAK3O75914 559 aaPredicted RBP12.15□□□□□ -0.46
USP25-209ENST00000547201 POTEIP0CG38 1075 aa12.07□□□□□ -0.48
USP25-209ENST00000547201 FKBP8Q14318 412 aa12.05□□□□□ -0.48
USP25-209ENST00000547201 DCBLD2Q96PD2 775 aa12.05□□□□□ -0.48
USP25-209ENST00000547201 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
USP25-209ENST00000547201 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
USP25-209ENST00000547201 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
USP25-209ENST00000547201 MIER1Q8N108 512 aa12.01□□□□□ -0.49
USP25-209ENST00000547201 LHX8Q68G74 356 aa11.99□□□□□ -0.49
USP25-209ENST00000547201 CCDC180Q9P1Z9 1646 aa11.99□□□□□ -0.49
USP25-209ENST00000547201 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
USP25-209ENST00000547201 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms