RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 FHOD1Q9Y613 1164 aa12.04□□□□□ -0.48
SOD2-216ENST00000546260 ELP1O95163 1332 aa12.04□□□□□ -0.48
SOD2-216ENST00000546260 KIF1CO43896 1103 aaKnown RBP12.03□□□□□ -0.48
SOD2-216ENST00000546260 SIRT1Q96EB6 747 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 UTP14AQ9BVJ6 771 aaKnown RBP12.03□□□□□ -0.48
SOD2-216ENST00000546260 ORC3Q9UBD5 711 aaPredicted RBP12.03□□□□□ -0.48
SOD2-216ENST00000546260 ECM2O94769 699 aaPredicted RBP12.03□□□□□ -0.48
SOD2-216ENST00000546260 CLNS1AP54105 237 aaKnown RBP12.03□□□□□ -0.48
SOD2-216ENST00000546260 AK2P54819 239 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 ERC1Q8IUD2 1116 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 IFNKQ9P0W0 207 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 PPP6R1Q9UPN7 881 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 FAN1Q9Y2M0 1017 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 CCDC196A0A1B0GTZ2 297 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 SSBP05455 408 aaKnown RBP eCLIP12.03□□□□□ -0.48
SOD2-216ENST00000546260 PRKAR2BP31323 418 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 CFAP70Q5T0N1 1121 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 EFCAB13Q8IY85 973 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 ASXL1Q8IXJ9 1541 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 UHRF1BP1Q6BDS2 1440 aa12.03□□□□□ -0.48
SOD2-216ENST00000546260 LRRFIP1Q32MZ4 808 aaKnown RBP12.02□□□□□ -0.48
SOD2-216ENST00000546260 RUFY2Q8WXA3 655 aa12.02□□□□□ -0.48
SOD2-216ENST00000546260 EPRSP07814 1512 aaKnown RBP12.02□□□□□ -0.48
SOD2-216ENST00000546260 DONSONQ9NYP3 566 aa12.02□□□□□ -0.48
SOD2-216ENST00000546260 PZPP20742 1482 aa12.02□□□□□ -0.49
SOD2-216ENST00000546260 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.49
SOD2-216ENST00000546260 PSEN1P49768 467 aa12.02□□□□□ -0.49
SOD2-216ENST00000546260 EIF5P55010 431 aaKnown RBP12.02□□□□□ -0.49
SOD2-216ENST00000546260 KARSQ15046 597 aaKnown RBP12.02□□□□□ -0.49
SOD2-216ENST00000546260 TADA2BQ86TJ2 420 aa12.02□□□□□ -0.49
SOD2-216ENST00000546260 OTUD6BQ8N6M0 293 aa12.02□□□□□ -0.49
SOD2-216ENST00000546260 ZNF446Q9NWS9 450 aa12.02□□□□□ -0.49
SOD2-216ENST00000546260 TOP1P11387 765 aaKnown RBP12.02□□□□□ -0.49
SOD2-216ENST00000546260 PEX19P40855 299 aa12.02□□□□□ -0.49
SOD2-216ENST00000546260 SPG7Q9UQ90 795 aa12.02□□□□□ -0.49
SOD2-216ENST00000546260 CAVIN2O95810 425 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 PDE1AP54750 535 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 ETF1P62495 437 aaKnown RBP12.01□□□□□ -0.49
SOD2-216ENST00000546260 CCDC158Q5M9N0 1113 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 CNNM3Q8NE01 707 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 CAGE1Q8TC20 777 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 DCTPP1Q9H773 170 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 CAPN7Q9Y6W3 813 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 A0A087WUV0 522 aaPredicted RBP12.01□□□□□ -0.49
SOD2-216ENST00000546260 A0A087WWV3 80 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 PPP1R13BQ96KQ4 1090 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 ZSCAN31Q96LW9 406 aaPredicted RBP12.01□□□□□ -0.49
SOD2-216ENST00000546260 CDK13Q14004 1512 aaKnown RBP12.01□□□□□ -0.49
SOD2-216ENST00000546260 ATP2B2Q01814 1243 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 LONRF2Q1L5Z9 754 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 CCDC70Q6NSX1 233 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 PRPF40BQ6NWY9 871 aaKnown RBP12.01□□□□□ -0.49
SOD2-216ENST00000546260 SCLT1Q96NL6 688 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 BICC1Q9H694 974 aaKnown RBP12.01□□□□□ -0.49
SOD2-216ENST00000546260 NSD3Q9BZ95 1437 aa12.01□□□□□ -0.49
SOD2-216ENST00000546260 LMOD1P29536 600 aaPredicted RBP12□□□□□ -0.49
SOD2-216ENST00000546260 ANAPC15P60006 121 aa12□□□□□ -0.49
SOD2-216ENST00000546260 NUTM1Q86Y26 1132 aa12□□□□□ -0.49
SOD2-216ENST00000546260 GPR161Q8N6U8 529 aaKnown RBP12□□□□□ -0.49
SOD2-216ENST00000546260 AFAP1L1Q8TED9 768 aa12□□□□□ -0.49
SOD2-216ENST00000546260 NECTIN2Q92692 538 aa12□□□□□ -0.49
SOD2-216ENST00000546260 VEZTQ9HBM0 779 aa12□□□□□ -0.49
SOD2-216ENST00000546260 PRAG1Q86YV5 1406 aa12□□□□□ -0.49
SOD2-216ENST00000546260 EFCAB8A8MWE9 144 aa12□□□□□ -0.49
SOD2-216ENST00000546260 N4BP2L2Q92802 583 aaPredicted RBP12□□□□□ -0.49
SOD2-216ENST00000546260 ABCC11Q96J66 1382 aa12□□□□□ -0.49
SOD2-216ENST00000546260 NPHP3Q7Z494 1330 aa12□□□□□ -0.49
SOD2-216ENST00000546260 A0A1B0GUA9 196 aa12□□□□□ -0.49
SOD2-216ENST00000546260 GCKP35557 465 aa12□□□□□ -0.49
SOD2-216ENST00000546260 CCAR1Q8IX12 1150 aaKnown RBP12□□□□□ -0.49
SOD2-216ENST00000546260 CALR3Q96L12 384 aaKnown RBP12□□□□□ -0.49
SOD2-216ENST00000546260 STK26Q9P289 416 aa12□□□□□ -0.49
SOD2-216ENST00000546260 CFAP45Q9UL16 551 aa12□□□□□ -0.49
SOD2-216ENST00000546260 PDE6BP35913 854 aa12□□□□□ -0.49
SOD2-216ENST00000546260 CCT5P48643 541 aa12□□□□□ -0.49
SOD2-216ENST00000546260 HSP90AA4PQ58FG1 418 aa12□□□□□ -0.49
SOD2-216ENST00000546260 AP1ARQ63HQ0 302 aa12□□□□□ -0.49
SOD2-216ENST00000546260 TMED8Q6PL24 325 aaPredicted RBP12□□□□□ -0.49
SOD2-216ENST00000546260 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
SOD2-216ENST00000546260 STK31Q9BXU1 1019 aa12□□□□□ -0.49
SOD2-216ENST00000546260 SIL1Q9H173 461 aa12□□□□□ -0.49
SOD2-216ENST00000546260 PTPRCP08575 1304 aa11.99□□□□□ -0.49
SOD2-216ENST00000546260 UGGT2Q9NYU1 1516 aa11.99□□□□□ -0.49
SOD2-216ENST00000546260 ATP2C2O75185 946 aa11.99□□□□□ -0.49
SOD2-216ENST00000546260 TTC6Q86TZ1 520 aa11.99□□□□□ -0.49
SOD2-216ENST00000546260 WDHD1O75717 1129 aaPredicted RBP11.99□□□□□ -0.49
SOD2-216ENST00000546260 CUL4AQ13619 759 aa11.99□□□□□ -0.49
SOD2-216ENST00000546260 CC2D1AQ6P1N0 951 aaPredicted RBP11.99□□□□□ -0.49
SOD2-216ENST00000546260 FMNL3Q8IVF7 1028 aa11.99□□□□□ -0.49
SOD2-216ENST00000546260 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
SOD2-216ENST00000546260 FAM135AQ9P2D6 1515 aa11.99□□□□□ -0.49
SOD2-216ENST00000546260 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
SOD2-216ENST00000546260 CNTROBQ8N137 903 aa11.99□□□□□ -0.49
SOD2-216ENST00000546260 FSIP1Q8NA03 581 aa11.99□□□□□ -0.49
SOD2-216ENST00000546260 TDRD7Q8NHU6 1098 aaKnown RBP11.99□□□□□ -0.49
SOD2-216ENST00000546260 CLSTN2Q9H4D0 955 aa11.99□□□□□ -0.49
SOD2-216ENST00000546260 TULP1O00294 542 aaPredicted RBP11.98□□□□□ -0.49
SOD2-216ENST00000546260 PES1O00541 588 aaKnown RBP11.98□□□□□ -0.49
SOD2-216ENST00000546260 ATP8B1O43520 1251 aa11.98□□□□□ -0.49
SOD2-216ENST00000546260 TUBB4AP04350 444 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms