RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 CCDC30Q5VVM6 783 aa20.07■□□□□ 0.8
SPTB-205ENST00000542694 KRT24Q2M2I5 525 aa20.06■□□□□ 0.8
SPTB-205ENST00000542694 TPTE2Q6XPS3 522 aa20.06■□□□□ 0.8
SPTB-205ENST00000542694 C10orf71Q711Q0 1435 aa20.06■□□□□ 0.8
SPTB-205ENST00000542694 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
SPTB-205ENST00000542694 NECTIN2Q92692 538 aa20.06■□□□□ 0.8
SPTB-205ENST00000542694 NIP7Q9Y221 180 aaKnown RBP eCLIP20.06■□□□□ 0.8
SPTB-205ENST00000542694 ST5P78524 1137 aa20.05■□□□□ 0.8
SPTB-205ENST00000542694 HSP90AB3PQ58FF7 597 aa20.05■□□□□ 0.8
SPTB-205ENST00000542694 ELL2O00472 640 aaPredicted RBP20.04■□□□□ 0.8
SPTB-205ENST00000542694 PDE6BP35913 854 aa20.04■□□□□ 0.8
SPTB-205ENST00000542694 GIGYF2Q6Y7W6 1299 aaKnown RBP20.04■□□□□ 0.8
SPTB-205ENST00000542694 TTLL7Q6ZT98 887 aa20.04■□□□□ 0.8
SPTB-205ENST00000542694 COPS6Q7L5N1 327 aa20.04■□□□□ 0.8
SPTB-205ENST00000542694 NBPF5PQ86XG9 351 aaPredicted RBP20.04■□□□□ 0.8
SPTB-205ENST00000542694 CNBD1Q8NA66 436 aa20.04■□□□□ 0.8
SPTB-205ENST00000542694 BRIP1Q9BX63 1249 aa20.04■□□□□ 0.8
SPTB-205ENST00000542694 NYXQ9GZU5 481 aa20.04■□□□□ 0.8
SPTB-205ENST00000542694 CHPF2Q9P2E5 772 aa20.04■□□□□ 0.8
SPTB-205ENST00000542694 SCN7AQ01118 1682 aa20.03■□□□□ 0.8
SPTB-205ENST00000542694 SENP3-EIF4A1A0A087X0R7 540 aa20.03■□□□□ 0.8
SPTB-205ENST00000542694 GTF2E1P29083 439 aaPredicted RBP20.03■□□□□ 0.8
SPTB-205ENST00000542694 C8orf58Q8NAV2 365 aa20.03■□□□□ 0.8
SPTB-205ENST00000542694 STK31Q9BXU1 1019 aa20.03■□□□□ 0.8
SPTB-205ENST00000542694 PIM2Q9P1W9 311 aa20.03■□□□□ 0.8
SPTB-205ENST00000542694 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.8
SPTB-205ENST00000542694 A0A0G2JLW4 131 aa20.02■□□□□ 0.8
SPTB-205ENST00000542694 H0YIN7 160 aa20.02■□□□□ 0.8
SPTB-205ENST00000542694 AIMP1Q12904 312 aaKnown RBP20.02■□□□□ 0.8
SPTB-205ENST00000542694 HLFQ16534 295 aa20.02■□□□□ 0.8
SPTB-205ENST00000542694 LRP10Q7Z4F1 713 aa20.02■□□□□ 0.8
SPTB-205ENST00000542694 MIER1Q8N108 512 aa20.02■□□□□ 0.8
SPTB-205ENST00000542694 XAGE3Q8WTP9 111 aa20.02■□□□□ 0.8
SPTB-205ENST00000542694 TSR2Q969E8 191 aaKnown RBP20.02■□□□□ 0.8
SPTB-205ENST00000542694 ZBTB3Q9H5J0 574 aa20.02■□□□□ 0.8
SPTB-205ENST00000542694 DPEP1P16444 411 aa20.01■□□□□ 0.79
SPTB-205ENST00000542694 PROSER3Q2NL68 480 aa20.01■□□□□ 0.79
SPTB-205ENST00000542694 TWISTNBQ3B726 338 aaPredicted RBP20.01■□□□□ 0.79
SPTB-205ENST00000542694 PARP10Q53GL7 1025 aa20.01■□□□□ 0.79
SPTB-205ENST00000542694 ANKRD13DQ6ZTN6 518 aa20.01■□□□□ 0.79
SPTB-205ENST00000542694 BCORQ6W2J9 1755 aa20■□□□□ 0.79
SPTB-205ENST00000542694 ANXA1P04083 346 aa20■□□□□ 0.79
SPTB-205ENST00000542694 PRR5LQ6MZQ0 368 aa20■□□□□ 0.79
SPTB-205ENST00000542694 PPP1R42Q7Z4L9 355 aa20■□□□□ 0.79
SPTB-205ENST00000542694 PLBD2Q8NHP8 589 aa20■□□□□ 0.79
SPTB-205ENST00000542694 DDX58O95786 925 aaKnown RBP19.99■□□□□ 0.79
SPTB-205ENST00000542694 ATP10DQ9P241 1426 aa19.99■□□□□ 0.79
SPTB-205ENST00000542694 FANCIQ9NVI1 1328 aa19.99■□□□□ 0.79
SPTB-205ENST00000542694 AFDNP55196 1824 aaKnown RBP19.98■□□□□ 0.79
SPTB-205ENST00000542694 E9PSI1 815 aa19.98■□□□□ 0.79
SPTB-205ENST00000542694 DALRD3Q5D0E6 543 aaKnown RBP19.98■□□□□ 0.79
SPTB-205ENST00000542694 ZNF34Q8IZ26 560 aa19.98■□□□□ 0.79
SPTB-205ENST00000542694 NRXN2Q9P2S2 1712 aa19.98■□□□□ 0.79
SPTB-205ENST00000542694 PXDNLA1KZ92 1463 aa19.98■□□□□ 0.79
SPTB-205ENST00000542694 TCIRG1Q13488 830 aa19.97■□□□□ 0.79
SPTB-205ENST00000542694 C2CD5Q86YS7 1000 aa19.97■□□□□ 0.79
SPTB-205ENST00000542694 TSPYL6Q8N831 410 aa19.97■□□□□ 0.79
SPTB-205ENST00000542694 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
SPTB-205ENST00000542694 NUP98P52948 1817 aa19.97■□□□□ 0.79
SPTB-205ENST00000542694 KCNA3P22001 575 aa19.96■□□□□ 0.79
SPTB-205ENST00000542694 RIC3Q7Z5B4 369 aa19.96■□□□□ 0.79
SPTB-205ENST00000542694 BCS1LQ9Y276 419 aa19.96■□□□□ 0.79
SPTB-205ENST00000542694 RNF123Q5XPI4 1314 aa19.96■□□□□ 0.79
SPTB-205ENST00000542694 IBTKQ9P2D0 1353 aaPredicted RBP19.95■□□□□ 0.79
SPTB-205ENST00000542694 YBX3P16989 372 aaKnown RBP eCLIP19.95■□□□□ 0.78
SPTB-205ENST00000542694 EXOSC9Q06265 439 aaKnown RBP19.95■□□□□ 0.78
SPTB-205ENST00000542694 TTLL6Q8N841 843 aa19.95■□□□□ 0.78
SPTB-205ENST00000542694 FAM177BA6PVY3 158 aa19.94■□□□□ 0.78
SPTB-205ENST00000542694 VAMP4O75379 141 aa19.94■□□□□ 0.78
SPTB-205ENST00000542694 GPTP24298 496 aa19.94■□□□□ 0.78
SPTB-205ENST00000542694 CHRNA5P30532 468 aa19.94■□□□□ 0.78
SPTB-205ENST00000542694 UTP14AQ9BVJ6 771 aaKnown RBP19.94■□□□□ 0.78
SPTB-205ENST00000542694 CNKSR1Q969H4 720 aa19.93■□□□□ 0.78
SPTB-205ENST00000542694 MASTLQ96GX5 879 aa19.93■□□□□ 0.78
SPTB-205ENST00000542694 CACNA1FO60840 1977 aa19.92■□□□□ 0.78
SPTB-205ENST00000542694 SLC4A2P04920 1241 aa19.92■□□□□ 0.78
SPTB-205ENST00000542694 HSP90B1P14625 803 aaKnown RBP19.92■□□□□ 0.78
SPTB-205ENST00000542694 YY1P25490 414 aa19.92■□□□□ 0.78
SPTB-205ENST00000542694 TRIM28Q13263 835 aaKnown RBP19.92■□□□□ 0.78
SPTB-205ENST00000542694 SUSD4Q5VX71 490 aa19.92■□□□□ 0.78
SPTB-205ENST00000542694 STYK1Q6J9G0 422 aa19.92■□□□□ 0.78
SPTB-205ENST00000542694 ZNF622Q969S3 477 aaKnown RBP eCLIP19.92■□□□□ 0.78
SPTB-205ENST00000542694 N4BP2Q86UW6 1770 aaPredicted RBP19.91■□□□□ 0.78
SPTB-205ENST00000542694 KLRG2A4D1S0 409 aaPredicted RBP19.91■□□□□ 0.78
SPTB-205ENST00000542694 PHAXQ9H814 394 aaKnown RBP19.91■□□□□ 0.78
SPTB-205ENST00000542694 SPINK5Q9NQ38 1064 aaPredicted RBP19.91■□□□□ 0.78
SPTB-205ENST00000542694 CHD4Q14839 1912 aa19.91■□□□□ 0.78
SPTB-205ENST00000542694 SRGNP10124 158 aa19.9■□□□□ 0.78
SPTB-205ENST00000542694 NPR1P16066 1061 aa19.9■□□□□ 0.78
SPTB-205ENST00000542694 SLFN5Q08AF3 891 aa19.9■□□□□ 0.78
SPTB-205ENST00000542694 NLRP10Q86W26 655 aa19.9■□□□□ 0.78
SPTB-205ENST00000542694 ZNF428Q96B54 188 aa19.9■□□□□ 0.78
SPTB-205ENST00000542694 ALDH1B1P30837 517 aa19.89■□□□□ 0.77
SPTB-205ENST00000542694 NEXNQ0ZGT2 675 aa19.89■□□□□ 0.77
SPTB-205ENST00000542694 SLC10A5Q5PT55 438 aa19.89■□□□□ 0.77
SPTB-205ENST00000542694 KSR2Q6VAB6 950 aa19.89■□□□□ 0.77
SPTB-205ENST00000542694 UBN2Q6ZU65 1347 aa19.89■□□□□ 0.77
SPTB-205ENST00000542694 ARHGAP27Q6ZUM4 889 aa19.89■□□□□ 0.77
SPTB-205ENST00000542694 CCDC24Q8N4L8 307 aa19.89■□□□□ 0.77
SPTB-205ENST00000542694 NLRP3Q96P20 1036 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms