RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 NRXN2Q9P2S2 1712 aa9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 FANCIQ9NVI1 1328 aa9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 AFDNP55196 1824 aaKnown RBP9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 KIF13BQ9NQT8 1826 aa9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 PHF14O94880 888 aa9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 STARD3NLO95772 234 aa9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 KRT24Q2M2I5 525 aa9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 SMIM5Q71RC9 77 aa9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 FLAD1Q8NFF5 587 aa9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 TSR2Q969E8 191 aaKnown RBP9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 RTCBQ9Y3I0 505 aaKnown RBP9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 USP16Q9Y5T5 823 aa9.08□□□□□ -0.96
LPCAT3-209ENST00000540060 KIAA1551Q9HCM1 1747 aa9.07□□□□□ -0.96
LPCAT3-209ENST00000540060 NBPF26B4DH59 902 aa9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 A1BGP04217 495 aa9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 HOXB7P09629 217 aa9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 CANXP27824 592 aaKnown RBP9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 IL6STP40189 918 aaPredicted RBP9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 EIF5P55010 431 aaKnown RBP9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 NBPF10Q6P3W6 841 aaKnown RBP9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 NBPF15Q8N660 670 aa9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 SLC16A10Q8TF71 515 aa9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 ARHGEF1Q92888 912 aaKnown RBP9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 PHF12Q96QT6 1004 aa9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 MTFR1LQ9H019 292 aa9.06□□□□□ -0.96
LPCAT3-209ENST00000540060 ERBB4Q15303 1308 aa9.05□□□□□ -0.96
LPCAT3-209ENST00000540060 USP42Q9H9J4 1324 aaKnown RBP9.05□□□□□ -0.96
LPCAT3-209ENST00000540060 ZBTB7AO95365 584 aa9.05□□□□□ -0.96
LPCAT3-209ENST00000540060 PIP4K2AP48426 406 aaPredicted RBP9.05□□□□□ -0.96
LPCAT3-209ENST00000540060 TRAPPC3LQ5T215 181 aa9.05□□□□□ -0.96
LPCAT3-209ENST00000540060 C8orf58Q8NAV2 365 aa9.05□□□□□ -0.96
LPCAT3-209ENST00000540060 SGIP1Q9BQI5 828 aa9.05□□□□□ -0.96
LPCAT3-209ENST00000540060 N4BP2Q86UW6 1770 aaPredicted RBP9.04□□□□□ -0.96
LPCAT3-209ENST00000540060 DLEC1Q9Y238 1755 aa9.04□□□□□ -0.96
LPCAT3-209ENST00000540060 RFC4P35249 363 aa9.04□□□□□ -0.96
LPCAT3-209ENST00000540060 PTGER2P43116 358 aa9.04□□□□□ -0.96
LPCAT3-209ENST00000540060 HNRNPUQ00839 825 aaKnown RBP eCLIP9.04□□□□□ -0.96
LPCAT3-209ENST00000540060 GOLGA2Q08379 1002 aa9.04□□□□□ -0.96
LPCAT3-209ENST00000540060 PDIA6Q15084 440 aa9.04□□□□□ -0.96
LPCAT3-209ENST00000540060 DUSP27Q5VZP5 1158 aa9.04□□□□□ -0.96
LPCAT3-209ENST00000540060 LRP10Q7Z4F1 713 aa9.04□□□□□ -0.96
LPCAT3-209ENST00000540060 MYH16Q9H6N6 1097 aa9.04□□□□□ -0.96
LPCAT3-209ENST00000540060 ANKRD31Q8N7Z5 1873 aa9.04□□□□□ -0.96
LPCAT3-209ENST00000540060 BRCA1P38398 1863 aaKnown RBP9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 E9PSI1 815 aa9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 GYS1P13807 737 aa9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 EIF2S2P20042 333 aaKnown RBP9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 PROSER3Q2NL68 480 aa9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 HDGFL1Q5TGJ6 251 aa9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 MSL1Q68DK7 614 aa9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 TSPYL6Q8N831 410 aa9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 SPON1Q9HCB6 807 aa9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 SRP68Q9UHB9 627 aaKnown RBP9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 NARFQ9UHQ1 456 aa9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 ZNF330Q9Y3S2 320 aaPredicted RBP9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 LAMB2P55268 1798 aa9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 ZBED9Q6R2W3 1325 aa9.03□□□□□ -0.96
LPCAT3-209ENST00000540060 COL11A2P13942 1736 aaPredicted RBP9.02□□□□□ -0.96
LPCAT3-209ENST00000540060 A0A087WZG4 1122 aa9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 ELL2O00472 640 aaPredicted RBP9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 MYL6BP14649 208 aa9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 EXOSC9Q06265 439 aaKnown RBP9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 SLFN5Q08AF3 891 aa9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 TWISTNBQ3B726 338 aaPredicted RBP9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 USPL1Q5W0Q7 1092 aa9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 DZIP3Q86Y13 1208 aaKnown RBP9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 TRMT2AQ8IZ69 625 aaKnown RBP9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 NECTIN2Q92692 538 aa9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 CDCA7LQ96GN5 454 aa9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 BCL2L12Q9HB09 334 aa9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 CHPF2Q9P2E5 772 aa9.02□□□□□ -0.97
LPCAT3-209ENST00000540060 TNRC6CQ9HCJ0 1690 aaKnown RBP9.01□□□□□ -0.97
LPCAT3-209ENST00000540060 POTEFA5A3E0 1075 aa9.01□□□□□ -0.97
LPCAT3-209ENST00000540060 ZPR1O75312 459 aa9.01□□□□□ -0.97
LPCAT3-209ENST00000540060 CAMTA2O94983 1202 aa9.01□□□□□ -0.97
LPCAT3-209ENST00000540060 ANXA1P04083 346 aa9.01□□□□□ -0.97
LPCAT3-209ENST00000540060 FKBP8Q14318 412 aa9.01□□□□□ -0.97
LPCAT3-209ENST00000540060 DDX21Q9NR30 783 aaKnown RBP eCLIP9.01□□□□□ -0.97
LPCAT3-209ENST00000540060 ATP10DQ9P241 1426 aa9.01□□□□□ -0.97
LPCAT3-209ENST00000540060 DBF4Q9UBU7 674 aaPredicted RBP9.01□□□□□ -0.97
LPCAT3-209ENST00000540060 TBC1D2BQ9UPU7 963 aa9.01□□□□□ -0.97
LPCAT3-209ENST00000540060 CACNA1SQ13698 1873 aa9□□□□□ -0.97
LPCAT3-209ENST00000540060 DDX60Q8IY21 1712 aaKnown RBP9□□□□□ -0.97
LPCAT3-209ENST00000540060 C10orf71Q711Q0 1435 aa9□□□□□ -0.97
LPCAT3-209ENST00000540060 RGL2O15211 777 aa9□□□□□ -0.97
LPCAT3-209ENST00000540060 POLD1P28340 1107 aa9□□□□□ -0.97
LPCAT3-209ENST00000540060 TTLL7Q6ZT98 887 aa9□□□□□ -0.97
LPCAT3-209ENST00000540060 NPM2Q86SE8 214 aaKnown RBP9□□□□□ -0.97
LPCAT3-209ENST00000540060 NLGN1Q8N2Q7 840 aa9□□□□□ -0.97
LPCAT3-209ENST00000540060 TMEM121BQ9BXQ6 578 aaPredicted RBP9□□□□□ -0.97
LPCAT3-209ENST00000540060 MAP3K15Q6ZN16 1313 aa9□□□□□ -0.97
LPCAT3-209ENST00000540060 VAMP4O75379 141 aa8.99□□□□□ -0.97
LPCAT3-209ENST00000540060 MMP10P09238 476 aa8.99□□□□□ -0.97
LPCAT3-209ENST00000540060 DDR1Q08345 913 aa8.99□□□□□ -0.97
LPCAT3-209ENST00000540060 CCDC30Q5VVM6 783 aa8.99□□□□□ -0.97
LPCAT3-209ENST00000540060 KIF6Q6ZMV9 814 aa8.99□□□□□ -0.97
LPCAT3-209ENST00000540060 CHMP4AQ9BY43 222 aa8.99□□□□□ -0.97
LPCAT3-209ENST00000540060 CARMIL3Q8ND23 1372 aa8.99□□□□□ -0.97
LPCAT3-209ENST00000540060 GOLGB1Q14789 3259 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms