RNA–Protein interactions for RNA: ENST00000538653.1

BCAR3-209, Transcript of BCAR3, NSP family adaptor protein, humanhuman

TSL 2

Gene BCAR3, Length 900 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR3-209ENST00000538653 PNMA3Q9UL41 463 aa8.56□□□□□ -1.04
BCAR3-209ENST00000538653 V9GY48 417 aaPredicted RBP8.56□□□□□ -1.04
BCAR3-209ENST00000538653 PKD1L3Q7Z443 1732 aa8.56□□□□□ -1.04
BCAR3-209ENST00000538653 BRWD3Q6RI45 1802 aa8.55□□□□□ -1.04
BCAR3-209ENST00000538653 PDE3BQ13370 1112 aa8.55□□□□□ -1.04
BCAR3-209ENST00000538653 KRT27Q7Z3Y8 459 aa8.55□□□□□ -1.04
BCAR3-209ENST00000538653 BCL9O00512 1426 aa8.54□□□□□ -1.04
BCAR3-209ENST00000538653 EXOC5O00471 708 aa8.54□□□□□ -1.04
BCAR3-209ENST00000538653 U2SURPO15042 1029 aaKnown RBP8.54□□□□□ -1.04
BCAR3-209ENST00000538653 SULT6B1Q6IMI4 303 aa8.54□□□□□ -1.04
BCAR3-209ENST00000538653 PAXIP1Q6ZW49 1069 aaPredicted RBP8.54□□□□□ -1.04
BCAR3-209ENST00000538653 PCDH11XQ9BZA7 1347 aa8.54□□□□□ -1.04
BCAR3-209ENST00000538653 PCDH11YQ9BZA8 1340 aa8.54□□□□□ -1.04
BCAR3-209ENST00000538653 C3orf80F5H4A9 247 aa8.53□□□□□ -1.04
BCAR3-209ENST00000538653 PRIM1P49642 420 aaKnown RBP8.53□□□□□ -1.04
BCAR3-209ENST00000538653 AMOTQ4VCS5 1084 aa8.53□□□□□ -1.04
BCAR3-209ENST00000538653 ILDR2Q71H61 639 aa8.53□□□□□ -1.04
BCAR3-209ENST00000538653 ZCRB1Q8TBF4 217 aaKnown RBP8.53□□□□□ -1.04
BCAR3-209ENST00000538653 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.53□□□□□ -1.04
BCAR3-209ENST00000538653 RBM27Q9P2N5 1060 aaKnown RBP8.53□□□□□ -1.04
BCAR3-209ENST00000538653 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
BCAR3-209ENST00000538653 SHANK3Q9BYB0 1731 aa8.53□□□□□ -1.04
BCAR3-209ENST00000538653 GRXCR2A6NFK2 248 aa8.52□□□□□ -1.05
BCAR3-209ENST00000538653 FCHSD2O94868 740 aa8.52□□□□□ -1.05
BCAR3-209ENST00000538653 U2AF1L5P0DN76 240 aaPredicted RBP8.52□□□□□ -1.05
BCAR3-209ENST00000538653 U2AF1Q01081 240 aaKnown RBP eCLIP8.52□□□□□ -1.05
BCAR3-209ENST00000538653 WDR43Q15061 677 aaKnown RBP eCLIP8.52□□□□□ -1.05
BCAR3-209ENST00000538653 DIEXFQ68CQ4 756 aaKnown RBP8.52□□□□□ -1.05
BCAR3-209ENST00000538653 FAM196AQ6ZSG2 479 aa8.52□□□□□ -1.05
BCAR3-209ENST00000538653 AEBP1Q8IUX7 1158 aa8.52□□□□□ -1.05
BCAR3-209ENST00000538653 ZNF516Q92618 1163 aa8.52□□□□□ -1.05
BCAR3-209ENST00000538653 NECTIN2Q92692 538 aa8.52□□□□□ -1.05
BCAR3-209ENST00000538653 CFAP44Q96MT7 982 aa8.52□□□□□ -1.05
BCAR3-209ENST00000538653 PNNQ9H307 717 aaKnown RBP8.52□□□□□ -1.05
BCAR3-209ENST00000538653 HMOX1P09601 288 aa8.51□□□□□ -1.05
BCAR3-209ENST00000538653 APLP1P51693 650 aa8.51□□□□□ -1.05
BCAR3-209ENST00000538653 E2F4Q16254 413 aa8.51□□□□□ -1.05
BCAR3-209ENST00000538653 PLEKHO1Q53GL0 409 aaPredicted RBP8.51□□□□□ -1.05
BCAR3-209ENST00000538653 NUDT18Q6ZVK8 323 aa8.51□□□□□ -1.05
BCAR3-209ENST00000538653 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
BCAR3-209ENST00000538653 NEFMP07197 916 aa8.5□□□□□ -1.05
BCAR3-209ENST00000538653 HSP90AB1P08238 724 aaKnown RBP8.5□□□□□ -1.05
BCAR3-209ENST00000538653 IFNL2Q8IZJ0 200 aa8.5□□□□□ -1.05
BCAR3-209ENST00000538653 MARCH10Q8NA82 808 aaPredicted RBP8.5□□□□□ -1.05
BCAR3-209ENST00000538653 CDHR5Q9HBB8 845 aa8.5□□□□□ -1.05
BCAR3-209ENST00000538653 MRS2Q9HD23 443 aa8.5□□□□□ -1.05
BCAR3-209ENST00000538653 ARIH1Q9Y4X5 557 aaPredicted RBP8.5□□□□□ -1.05
BCAR3-209ENST00000538653 CYP27B1O15528 508 aa8.49□□□□□ -1.05
BCAR3-209ENST00000538653 PHKG2P15735 406 aa8.49□□□□□ -1.05
BCAR3-209ENST00000538653 PRKAR2BP31323 418 aa8.49□□□□□ -1.05
BCAR3-209ENST00000538653 GGCXP38435 758 aa8.49□□□□□ -1.05
BCAR3-209ENST00000538653 C1orf141Q5JVX7 400 aa8.49□□□□□ -1.05
BCAR3-209ENST00000538653 CCDC125Q86Z20 511 aa8.49□□□□□ -1.05
BCAR3-209ENST00000538653 GAS2L2Q8NHY3 880 aa8.49□□□□□ -1.05
BCAR3-209ENST00000538653 DDX54Q8TDD1 881 aaKnown RBP8.49□□□□□ -1.05
BCAR3-209ENST00000538653 NHSQ6T4R5 1651 aa8.49□□□□□ -1.05
BCAR3-209ENST00000538653 CCER2I3L3R5 266 aa8.48□□□□□ -1.05
BCAR3-209ENST00000538653 AKAP4Q5JQC9 854 aa8.48□□□□□ -1.05
BCAR3-209ENST00000538653 ZNF530Q6P9A1 599 aaPredicted RBP8.48□□□□□ -1.05
BCAR3-209ENST00000538653 PDZRN3Q9UPQ7 1066 aa8.48□□□□□ -1.05
BCAR3-209ENST00000538653 MAPK8IP3Q9UPT6 1336 aa8.48□□□□□ -1.05
BCAR3-209ENST00000538653 SBF2Q86WG5 1849 aa8.47□□□□□ -1.05
BCAR3-209ENST00000538653 DOT1LQ8TEK3 1739 aa8.47□□□□□ -1.05
BCAR3-209ENST00000538653 SLF2Q8IX21 1173 aa8.47□□□□□ -1.05
BCAR3-209ENST00000538653 DCAF5Q96JK2 942 aa8.47□□□□□ -1.05
BCAR3-209ENST00000538653 MAP3K5Q99683 1374 aa8.47□□□□□ -1.05
BCAR3-209ENST00000538653 ADAMTS7Q9UKP4 1686 aa8.46□□□□□ -1.05
BCAR3-209ENST00000538653 TNS1Q9HBL0 1735 aaKnown RBP8.46□□□□□ -1.05
BCAR3-209ENST00000538653 TOGARAM1Q9Y4F4 1720 aa8.46□□□□□ -1.05
BCAR3-209ENST00000538653 RGPD3A6NKT7 1758 aaPredicted RBP8.46□□□□□ -1.05
BCAR3-209ENST00000538653 RGPD4Q7Z3J3 1758 aa8.46□□□□□ -1.05
BCAR3-209ENST00000538653 OSBPP22059 807 aa8.46□□□□□ -1.06
BCAR3-209ENST00000538653 SF3B2Q13435 895 aaKnown RBP8.46□□□□□ -1.06
BCAR3-209ENST00000538653 MTHFSDQ2M296 383 aaKnown RBP8.46□□□□□ -1.06
BCAR3-209ENST00000538653 FAM182BQ5T319 152 aa8.46□□□□□ -1.06
BCAR3-209ENST00000538653 NKX2-3Q8TAU0 364 aa8.46□□□□□ -1.06
BCAR3-209ENST00000538653 PNISRQ8TF01 805 aaKnown RBP8.46□□□□□ -1.06
BCAR3-209ENST00000538653 PLEKHF1Q96S99 279 aa8.46□□□□□ -1.06
BCAR3-209ENST00000538653 ADAMTS8Q9UP79 889 aa8.46□□□□□ -1.06
BCAR3-209ENST00000538653 KDM6AO15550 1401 aaPredicted RBP8.46□□□□□ -1.06
BCAR3-209ENST00000538653 MRC1P22897 1456 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 GNAT3A8MTJ3 354 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 ERVV-2B6SEH9 535 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 SOCS7O14512 581 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 HTATSF1O43719 755 aaKnown RBP8.45□□□□□ -1.06
BCAR3-209ENST00000538653 SLC4A3P48751 1232 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 COPS2P61201 443 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 NFE2L2Q16236 605 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 CCDC184Q52MB2 194 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 SWT1Q5T5J6 900 aaKnown RBP8.45□□□□□ -1.06
BCAR3-209ENST00000538653 RUNDC1Q96C34 613 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 PHACTR3Q96KR7 559 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 WDR70Q9NW82 654 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 SCN11AQ9UI33 1791 aa8.45□□□□□ -1.06
BCAR3-209ENST00000538653 TRIM37O94972 964 aa8.44□□□□□ -1.06
BCAR3-209ENST00000538653 LMOD3Q0VAK6 560 aa8.44□□□□□ -1.06
BCAR3-209ENST00000538653 PADI6Q6TGC4 694 aa8.44□□□□□ -1.06
BCAR3-209ENST00000538653 TTC13Q8NBP0 860 aa8.44□□□□□ -1.06
BCAR3-209ENST00000538653 RTF1Q92541 710 aaKnown RBP8.44□□□□□ -1.06
BCAR3-209ENST00000538653 TMUB1Q9BVT8 246 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms