RNA–Protein interactions for RNA: ENST00000538335.1

LINC01089-207, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 630 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-207ENST00000538335 KDM2BQ8NHM5 1336 aa37.09■■■■□ 3.53
LINC01089-207ENST00000538335 ZC3H4Q9UPT8 1303 aaKnown RBP37.09■■■■□ 3.53
LINC01089-207ENST00000538335 TPTE2Q6XPS3 522 aa37.08■■■■□ 3.53
LINC01089-207ENST00000538335 CNKSR1Q969H4 720 aa37.08■■■■□ 3.53
LINC01089-207ENST00000538335 NIP7Q9Y221 180 aaKnown RBP eCLIP37.08■■■■□ 3.53
LINC01089-207ENST00000538335 LMNB1P20700 586 aa37.07■■■■□ 3.52
LINC01089-207ENST00000538335 CCDC24Q8N4L8 307 aa37.07■■■■□ 3.52
LINC01089-207ENST00000538335 ERBB4Q15303 1308 aa37.07■■■■□ 3.52
LINC01089-207ENST00000538335 STYK1Q6J9G0 422 aa37.06■■■■□ 3.52
LINC01089-207ENST00000538335 KIF6Q6ZMV9 814 aa37.05■■■■□ 3.52
LINC01089-207ENST00000538335 ANKRD31Q8N7Z5 1873 aa37.05■■■■□ 3.52
LINC01089-207ENST00000538335 ERVV-1B6SEH8 477 aa37.04■■■■□ 3.52
LINC01089-207ENST00000538335 RASSF7Q02833 373 aa37.04■■■■□ 3.52
LINC01089-207ENST00000538335 MASTLQ96GX5 879 aa37.04■■■■□ 3.52
LINC01089-207ENST00000538335 RRP7AQ9Y3A4 280 aaKnown RBP37.04■■■■□ 3.52
LINC01089-207ENST00000538335 NGEFQ8N5V2 710 aa37.03■■■■□ 3.52
LINC01089-207ENST00000538335 RUNDC1Q96C34 613 aa37.03■■■■□ 3.52
LINC01089-207ENST00000538335 SRGNP10124 158 aa37.02■■■■□ 3.52
LINC01089-207ENST00000538335 SOGA3Q5TF21 947 aa37.02■■■■□ 3.52
LINC01089-207ENST00000538335 TOMM70O94826 608 aa37.01■■■■□ 3.52
LINC01089-207ENST00000538335 PRKRIP1Q9H875 184 aaPredicted RBP37.01■■■■□ 3.52
LINC01089-207ENST00000538335 GTF2E1P29083 439 aaPredicted RBP37■■■■□ 3.51
LINC01089-207ENST00000538335 CCDC146Q8IYE0 955 aa37■■■■□ 3.51
LINC01089-207ENST00000538335 C16orf71Q8IYS4 520 aaPredicted RBP37■■■■□ 3.51
LINC01089-207ENST00000538335 MAP3K15Q6ZN16 1313 aa37■■■■□ 3.51
LINC01089-207ENST00000538335 MYL6BP14649 208 aa36.99■■■■□ 3.51
LINC01089-207ENST00000538335 HSPA6P17066 643 aa36.99■■■■□ 3.51
LINC01089-207ENST00000538335 HLFQ16534 295 aa36.99■■■■□ 3.51
LINC01089-207ENST00000538335 NYXQ9GZU5 481 aa36.99■■■■□ 3.51
LINC01089-207ENST00000538335 NMRK2Q9NPI5 230 aa36.99■■■■□ 3.51
LINC01089-207ENST00000538335 C21orf2O43822 256 aa36.98■■■■□ 3.51
LINC01089-207ENST00000538335 SBF1O95248 1867 aa36.98■■■■□ 3.51
LINC01089-207ENST00000538335 NEUROD2Q15784 382 aa36.97■■■■□ 3.51
LINC01089-207ENST00000538335 NPR1P16066 1061 aa36.96■■■■□ 3.51
LINC01089-207ENST00000538335 ZEB1P37275 1124 aaPredicted RBP36.96■■■■□ 3.51
LINC01089-207ENST00000538335 COL11A2P13942 1736 aaPredicted RBP36.96■■■■□ 3.51
LINC01089-207ENST00000538335 NFKBIEO00221 500 aa36.95■■■■□ 3.51
LINC01089-207ENST00000538335 PRPF40BQ6NWY9 871 aaKnown RBP36.95■■■■□ 3.51
LINC01089-207ENST00000538335 ZNF219Q9P2Y4 722 aaPredicted RBP36.95■■■■□ 3.51
LINC01089-207ENST00000538335 FAM177BA6PVY3 158 aa36.94■■■■□ 3.5
LINC01089-207ENST00000538335 ADAMTS8Q9UP79 889 aa36.94■■■■□ 3.5
LINC01089-207ENST00000538335 KLRG2A4D1S0 409 aaPredicted RBP36.92■■■■□ 3.5
LINC01089-207ENST00000538335 TTLL7Q6ZT98 887 aa36.92■■■■□ 3.5
LINC01089-207ENST00000538335 LTBP3Q9NS15 1303 aa36.91■■■■□ 3.5
LINC01089-207ENST00000538335 EIF2S2P20042 333 aaKnown RBP36.91■■■■□ 3.5
LINC01089-207ENST00000538335 TAOK3Q9H2K8 898 aa36.91■■■■□ 3.5
LINC01089-207ENST00000538335 RBM46Q8TBY0 533 aaKnown RBP36.9■■■■□ 3.5
LINC01089-207ENST00000538335 ZBTB3Q9H5J0 574 aa36.9■■■■□ 3.5
LINC01089-207ENST00000538335 GLTPD2A6NH11 291 aa36.88■■■■□ 3.49
LINC01089-207ENST00000538335 IBTKQ9P2D0 1353 aaPredicted RBP36.88■■■■□ 3.49
LINC01089-207ENST00000538335 CHL1O00533 1208 aa36.87■■■■□ 3.49
LINC01089-207ENST00000538335 ALDH1B1P30837 517 aa36.87■■■■□ 3.49
LINC01089-207ENST00000538335 DPY19L2Q6NUT2 758 aa36.87■■■■□ 3.49
LINC01089-207ENST00000538335 GIGYF2Q6Y7W6 1299 aaKnown RBP36.87■■■■□ 3.49
LINC01089-207ENST00000538335 RRAGCQ9HB90 399 aa36.87■■■■□ 3.49
LINC01089-207ENST00000538335 CCDC93Q567U6 631 aa36.86■■■■□ 3.49
LINC01089-207ENST00000538335 TRIM35Q9UPQ4 493 aa36.86■■■■□ 3.49
LINC01089-207ENST00000538335 LAS1LQ9Y4W2 734 aaKnown RBP36.86■■■■□ 3.49
LINC01089-207ENST00000538335 PRELPP51888 382 aa36.85■■■■□ 3.49
LINC01089-207ENST00000538335 ERFEQ4G0M1 354 aa36.85■■■■□ 3.49
LINC01089-207ENST00000538335 TNRC6CQ9HCJ0 1690 aaKnown RBP36.85■■■■□ 3.49
LINC01089-207ENST00000538335 ARFGEF2Q9Y6D5 1785 aa36.84■■■■□ 3.49
LINC01089-207ENST00000538335 PARP10Q53GL7 1025 aa36.84■■■■□ 3.49
LINC01089-207ENST00000538335 SLX4Q8IY92 1834 aa36.84■■■■□ 3.49
LINC01089-207ENST00000538335 NUP98P52948 1817 aa36.83■■■■□ 3.49
LINC01089-207ENST00000538335 GPTP24298 496 aa36.83■■■■□ 3.49
LINC01089-207ENST00000538335 PPP1R42Q7Z4L9 355 aa36.83■■■■□ 3.49
LINC01089-207ENST00000538335 FER1L6Q2WGJ9 1857 aa36.83■■■■□ 3.49
LINC01089-207ENST00000538335 APLP1P51693 650 aa36.82■■■■□ 3.48
LINC01089-207ENST00000538335 FSTL1Q12841 308 aa36.82■■■■□ 3.48
LINC01089-207ENST00000538335 VEGFAP15692 232 aaPredicted RBP36.81■■■■□ 3.48
LINC01089-207ENST00000538335 PDIA6Q15084 440 aa36.81■■■■□ 3.48
LINC01089-207ENST00000538335 ZNF34Q8IZ26 560 aa36.81■■■■□ 3.48
LINC01089-207ENST00000538335 CEP350Q5VT06 3117 aa36.81■■■■□ 3.48
LINC01089-207ENST00000538335 HOXB7P09629 217 aa36.8■■■■□ 3.48
LINC01089-207ENST00000538335 HSP90AB3PQ58FF7 597 aa36.8■■■■□ 3.48
LINC01089-207ENST00000538335 NUTM1Q86Y26 1132 aa36.8■■■■□ 3.48
LINC01089-207ENST00000538335 C7orf43Q8WVR3 580 aa36.8■■■■□ 3.48
LINC01089-207ENST00000538335 TIAM2Q8IVF5 1701 aa36.79■■■■□ 3.48
LINC01089-207ENST00000538335 RIC1Q4ADV7 1423 aa36.79■■■■□ 3.48
LINC01089-207ENST00000538335 CALD1Q05682 793 aaKnown RBP36.79■■■■□ 3.48
LINC01089-207ENST00000538335 LRP10Q7Z4F1 713 aa36.79■■■■□ 3.48
LINC01089-207ENST00000538335 RTKN2Q8IZC4 609 aa36.79■■■■□ 3.48
LINC01089-207ENST00000538335 CCDC88AQ3V6T2 1871 aa36.79■■■■□ 3.48
LINC01089-207ENST00000538335 UBN2Q6ZU65 1347 aa36.79■■■■□ 3.48
LINC01089-207ENST00000538335 CRY2Q49AN0 593 aa36.78■■■■□ 3.48
LINC01089-207ENST00000538335 SUSD4Q5VX71 490 aa36.78■■■■□ 3.48
LINC01089-207ENST00000538335 RPGRQ92834 1020 aaKnown RBP36.78■■■■□ 3.48
LINC01089-207ENST00000538335 CFAP44Q96MT7 982 aa36.78■■■■□ 3.48
LINC01089-207ENST00000538335 DDX21Q9NR30 783 aaKnown RBP eCLIP36.78■■■■□ 3.48
LINC01089-207ENST00000538335 ABCC12Q96J65 1359 aa36.78■■■■□ 3.48
LINC01089-207ENST00000538335 CACNA1SQ13698 1873 aa36.77■■■■□ 3.48
LINC01089-207ENST00000538335 NECTIN2Q92692 538 aa36.76■■■■□ 3.48
LINC01089-207ENST00000538335 FKBP4Q02790 459 aaKnown RBP eCLIP36.75■■■■□ 3.47
LINC01089-207ENST00000538335 PROSER3Q2NL68 480 aa36.75■■■■□ 3.47
LINC01089-207ENST00000538335 SMC1BQ8NDV3 1235 aa36.75■■■■□ 3.47
LINC01089-207ENST00000538335 NTSR2O95665 410 aa36.74■■■■□ 3.47
LINC01089-207ENST00000538335 ANXA1P04083 346 aa36.74■■■■□ 3.47
LINC01089-207ENST00000538335 HDGFL1Q5TGJ6 251 aa36.74■■■■□ 3.47
LINC01089-207ENST00000538335 COPS6Q7L5N1 327 aa36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms