RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 LRRC37A3O60309 1634 aa12.33□□□□□ -0.44
DDB1-204ENST00000535147 BEND3Q5T5X7 828 aa12.33□□□□□ -0.44
DDB1-204ENST00000535147 GIMAP6Q6P9H5 292 aa12.33□□□□□ -0.44
DDB1-204ENST00000535147 SASS6Q6UVJ0 657 aa12.33□□□□□ -0.44
DDB1-204ENST00000535147 EPB41L2O43491 1005 aaKnown RBP12.32□□□□□ -0.44
DDB1-204ENST00000535147 DNM1Q05193 864 aaKnown RBP12.32□□□□□ -0.44
DDB1-204ENST00000535147 PRPF40BQ6NWY9 871 aaKnown RBP12.32□□□□□ -0.44
DDB1-204ENST00000535147 DNAAF4Q8WXU2 420 aa12.32□□□□□ -0.44
DDB1-204ENST00000535147 DIAPH3Q9NSV4 1193 aa12.32□□□□□ -0.44
DDB1-204ENST00000535147 PIK3C2AO00443 1686 aa12.32□□□□□ -0.44
DDB1-204ENST00000535147 PXDNLA1KZ92 1463 aa12.32□□□□□ -0.44
DDB1-204ENST00000535147 NWD1Q149M9 1564 aa12.32□□□□□ -0.44
DDB1-204ENST00000535147 EIF4A1P60842 406 aaKnown RBP12.32□□□□□ -0.44
DDB1-204ENST00000535147 UBE2HP62256 183 aa12.32□□□□□ -0.44
DDB1-204ENST00000535147 PKNOX2Q96KN3 472 aa12.32□□□□□ -0.44
DDB1-204ENST00000535147 JAKMIP1Q96N16 626 aaKnown RBP12.32□□□□□ -0.44
DDB1-204ENST00000535147 CHMP4AQ9BY43 222 aa12.32□□□□□ -0.44
DDB1-204ENST00000535147 HYPKQ9NX55 129 aa12.32□□□□□ -0.44
DDB1-204ENST00000535147 PA2G4Q9UQ80 394 aaKnown RBP12.32□□□□□ -0.44
DDB1-204ENST00000535147 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.32□□□□□ -0.44
DDB1-204ENST00000535147 GJB2P29033 226 aa12.31□□□□□ -0.44
DDB1-204ENST00000535147 COL9A3Q14050 684 aaPredicted RBP12.31□□□□□ -0.44
DDB1-204ENST00000535147 FAM184AQ8NB25 1140 aa12.31□□□□□ -0.44
DDB1-204ENST00000535147 TSC1Q92574 1164 aa12.31□□□□□ -0.44
DDB1-204ENST00000535147 EID1Q9Y6B2 187 aa12.31□□□□□ -0.44
DDB1-204ENST00000535147 VPS37CA5D8V6 355 aaPredicted RBP12.3□□□□□ -0.44
DDB1-204ENST00000535147 NECAB1Q8N987 351 aa12.3□□□□□ -0.44
DDB1-204ENST00000535147 CACNA1FO60840 1977 aa12.3□□□□□ -0.44
DDB1-204ENST00000535147 DYNC1I1O14576 645 aa12.3□□□□□ -0.44
DDB1-204ENST00000535147 GLRX3O76003 335 aaKnown RBP12.3□□□□□ -0.44
DDB1-204ENST00000535147 UVSSAQ2YD98 709 aa12.3□□□□□ -0.44
DDB1-204ENST00000535147 PDRG1Q9NUG6 133 aa12.3□□□□□ -0.44
DDB1-204ENST00000535147 MTMR6Q9Y217 621 aa12.3□□□□□ -0.44
DDB1-204ENST00000535147 ST3GAL1Q11201 340 aa12.3□□□□□ -0.44
DDB1-204ENST00000535147 NBPF6Q5VWK0 638 aa12.3□□□□□ -0.44
DDB1-204ENST00000535147 NBPF4Q96M43 638 aa12.3□□□□□ -0.44
DDB1-204ENST00000535147 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
DDB1-204ENST00000535147 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
DDB1-204ENST00000535147 AP5Z1O43299 807 aa12.29□□□□□ -0.44
DDB1-204ENST00000535147 NOLC1Q14978 699 aaKnown RBP eCLIP12.29□□□□□ -0.44
DDB1-204ENST00000535147 CLASRPQ8N2M8 674 aaKnown RBP12.29□□□□□ -0.44
DDB1-204ENST00000535147 DIP2AQ14689 1571 aa12.29□□□□□ -0.44
DDB1-204ENST00000535147 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
DDB1-204ENST00000535147 ADCY9O60503 1353 aa12.29□□□□□ -0.44
DDB1-204ENST00000535147 ME3Q16798 604 aa12.29□□□□□ -0.44
DDB1-204ENST00000535147 FAM173BQ6P4H8 233 aa12.29□□□□□ -0.44
DDB1-204ENST00000535147 FERMT3Q86UX7 667 aa12.29□□□□□ -0.44
DDB1-204ENST00000535147 PIBF1Q8WXW3 757 aa12.29□□□□□ -0.44
DDB1-204ENST00000535147 TCEANC2Q96MN5 208 aa12.29□□□□□ -0.44
DDB1-204ENST00000535147 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.29□□□□□ -0.44
DDB1-204ENST00000535147 KDM4AO75164 1064 aa12.28□□□□□ -0.44
DDB1-204ENST00000535147 MPRIPQ6WCQ1 1025 aa12.28□□□□□ -0.44
DDB1-204ENST00000535147 CEMIPQ8WUJ3 1361 aa12.28□□□□□ -0.44
DDB1-204ENST00000535147 FAM177BA6PVY3 158 aa12.28□□□□□ -0.44
DDB1-204ENST00000535147 PROSER3Q2NL68 480 aa12.28□□□□□ -0.44
DDB1-204ENST00000535147 CWF19L2Q2TBE0 894 aaKnown RBP12.28□□□□□ -0.44
DDB1-204ENST00000535147 HSP90AB4PQ58FF6 505 aa12.28□□□□□ -0.44
DDB1-204ENST00000535147 FAM227BQ96M60 508 aa12.28□□□□□ -0.44
DDB1-204ENST00000535147 FUCA2Q9BTY2 467 aa12.28□□□□□ -0.44
DDB1-204ENST00000535147 ECHDC1Q9NTX5 307 aa12.28□□□□□ -0.44
DDB1-204ENST00000535147 C9orf78Q9NZ63 289 aaPredicted RBP12.28□□□□□ -0.44
DDB1-204ENST00000535147 ATP6V1DQ9Y5K8 247 aa12.28□□□□□ -0.44
DDB1-204ENST00000535147 CYP46A1Q9Y6A2 500 aa12.28□□□□□ -0.44
DDB1-204ENST00000535147 TTC41PQ6P2S7 1318 aa12.27□□□□□ -0.44
DDB1-204ENST00000535147 VPS53Q5VIR6 699 aa12.27□□□□□ -0.44
DDB1-204ENST00000535147 RUFY2Q8WXA3 655 aa12.27□□□□□ -0.44
DDB1-204ENST00000535147 LRRC59Q96AG4 307 aaKnown RBP12.27□□□□□ -0.44
DDB1-204ENST00000535147 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.44
DDB1-204ENST00000535147 MAP3K2Q9Y2U5 619 aa12.27□□□□□ -0.44
DDB1-204ENST00000535147 TBX22Q9Y458 520 aa12.27□□□□□ -0.44
DDB1-204ENST00000535147 PRAMEF22A3QJZ6 481 aa12.27□□□□□ -0.45
DDB1-204ENST00000535147 BTBD11A6QL63 1104 aa12.27□□□□□ -0.45
DDB1-204ENST00000535147 LETM1O95202 739 aaPredicted RBP12.27□□□□□ -0.45
DDB1-204ENST00000535147 IFIT2P09913 472 aaKnown RBP12.27□□□□□ -0.45
DDB1-204ENST00000535147 KCNA6P17658 529 aa12.27□□□□□ -0.45
DDB1-204ENST00000535147 TEFQ10587 303 aa12.27□□□□□ -0.45
DDB1-204ENST00000535147 AACSQ86V21 672 aa12.27□□□□□ -0.45
DDB1-204ENST00000535147 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
DDB1-204ENST00000535147 MAP7D2Q96T17 732 aa12.27□□□□□ -0.45
DDB1-204ENST00000535147 TPCN1Q9ULQ1 816 aa12.27□□□□□ -0.45
DDB1-204ENST00000535147 USP42Q9H9J4 1324 aaKnown RBP12.26□□□□□ -0.45
DDB1-204ENST00000535147 N4BP2Q86UW6 1770 aaPredicted RBP12.26□□□□□ -0.45
DDB1-204ENST00000535147 KCNJ4P48050 445 aa12.26□□□□□ -0.45
DDB1-204ENST00000535147 NECTIN1Q15223 517 aa12.26□□□□□ -0.45
DDB1-204ENST00000535147 SPC24Q8NBT2 197 aa12.26□□□□□ -0.45
DDB1-204ENST00000535147 RBM8AQ9Y5S9 174 aaKnown RBP12.26□□□□□ -0.45
DDB1-204ENST00000535147 MYRIPQ8NFW9 859 aa12.26□□□□□ -0.45
DDB1-204ENST00000535147 TAF6LQ9Y6J9 622 aa12.26□□□□□ -0.45
DDB1-204ENST00000535147 CCDC171Q6TFL3 1326 aa12.26□□□□□ -0.45
DDB1-204ENST00000535147 CAMK4Q16566 473 aa12.25□□□□□ -0.45
DDB1-204ENST00000535147 CCDC8Q9H0W5 538 aaPredicted RBP12.25□□□□□ -0.45
DDB1-204ENST00000535147 LARP1BQ659C4 914 aaKnown RBP12.25□□□□□ -0.45
DDB1-204ENST00000535147 CREB3L3Q68CJ9 461 aa12.25□□□□□ -0.45
DDB1-204ENST00000535147 ZNF530Q6P9A1 599 aaPredicted RBP12.25□□□□□ -0.45
DDB1-204ENST00000535147 CDC37L1Q7L3B6 337 aa12.25□□□□□ -0.45
DDB1-204ENST00000535147 TTC6Q86TZ1 520 aa12.25□□□□□ -0.45
DDB1-204ENST00000535147 TLR7Q9NYK1 1049 aaKnown RBP12.25□□□□□ -0.45
DDB1-204ENST00000535147 ZKSCAN1P17029 563 aaPredicted RBP12.24□□□□□ -0.45
DDB1-204ENST00000535147 NMIQ13287 307 aaPredicted RBP12.24□□□□□ -0.45
DDB1-204ENST00000535147 MTX1Q13505 466 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms