RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 DDX21Q9NR30 783 aaKnown RBP eCLIP20.52■□□□□ 0.88
TSKU-204ENST00000533752 NPHP1O15259 732 aa20.51■□□□□ 0.87
TSKU-204ENST00000533752 YBX3P16989 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
TSKU-204ENST00000533752 WDR63Q8IWG1 891 aa20.51■□□□□ 0.87
TSKU-204ENST00000533752 CNBD1Q8NA66 436 aa20.51■□□□□ 0.87
TSKU-204ENST00000533752 ATP10DQ9P241 1426 aa20.51■□□□□ 0.87
TSKU-204ENST00000533752 DPEP1P16444 411 aa20.5■□□□□ 0.87
TSKU-204ENST00000533752 LRP10Q7Z4F1 713 aa20.5■□□□□ 0.87
TSKU-204ENST00000533752 DBF4Q9UBU7 674 aaPredicted RBP20.5■□□□□ 0.87
TSKU-204ENST00000533752 PDZRN3Q9UPQ7 1066 aa20.5■□□□□ 0.87
TSKU-204ENST00000533752 NIP7Q9Y221 180 aaKnown RBP eCLIP20.5■□□□□ 0.87
TSKU-204ENST00000533752 A0A0G2JLW4 131 aa20.49■□□□□ 0.87
TSKU-204ENST00000533752 ST5P78524 1137 aa20.49■□□□□ 0.87
TSKU-204ENST00000533752 TTLL7Q6ZT98 887 aa20.49■□□□□ 0.87
TSKU-204ENST00000533752 NBPF5PQ86XG9 351 aaPredicted RBP20.49■□□□□ 0.87
TSKU-204ENST00000533752 NECTIN2Q92692 538 aa20.49■□□□□ 0.87
TSKU-204ENST00000533752 CHPF2Q9P2E5 772 aa20.49■□□□□ 0.87
TSKU-204ENST00000533752 N4BP2Q86UW6 1770 aaPredicted RBP20.49■□□□□ 0.87
TSKU-204ENST00000533752 GOLGB1Q14789 3259 aaKnown RBP20.49■□□□□ 0.87
TSKU-204ENST00000533752 HLFQ16534 295 aa20.48■□□□□ 0.87
TSKU-204ENST00000533752 PROSER3Q2NL68 480 aa20.48■□□□□ 0.87
TSKU-204ENST00000533752 PRR5LQ6MZQ0 368 aa20.48■□□□□ 0.87
TSKU-204ENST00000533752 UTRNP46939 3433 aa20.47■□□□□ 0.87
TSKU-204ENST00000533752 SENP3-EIF4A1A0A087X0R7 540 aa20.47■□□□□ 0.87
TSKU-204ENST00000533752 DIEXFQ68CQ4 756 aaKnown RBP20.47■□□□□ 0.87
TSKU-204ENST00000533752 BRIP1Q9BX63 1249 aa20.47■□□□□ 0.87
TSKU-204ENST00000533752 ZBTB3Q9H5J0 574 aa20.47■□□□□ 0.87
TSKU-204ENST00000533752 HYPKQ9NX55 129 aa20.47■□□□□ 0.87
TSKU-204ENST00000533752 PIM2Q9P1W9 311 aa20.47■□□□□ 0.87
TSKU-204ENST00000533752 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
TSKU-204ENST00000533752 ANXA1P04083 346 aa20.46■□□□□ 0.87
TSKU-204ENST00000533752 YY1P25490 414 aa20.46■□□□□ 0.87
TSKU-204ENST00000533752 PDE6BP35913 854 aa20.46■□□□□ 0.87
TSKU-204ENST00000533752 GIGYF2Q6Y7W6 1299 aaKnown RBP20.46■□□□□ 0.87
TSKU-204ENST00000533752 TSR2Q969E8 191 aaKnown RBP20.46■□□□□ 0.87
TSKU-204ENST00000533752 SALL2Q9Y467 1007 aaPredicted RBP20.46■□□□□ 0.87
TSKU-204ENST00000533752 BRCA1P38398 1863 aaKnown RBP20.45■□□□□ 0.86
TSKU-204ENST00000533752 HSP90AB3PQ58FF7 597 aa20.45■□□□□ 0.86
TSKU-204ENST00000533752 TPTE2Q6XPS3 522 aa20.45■□□□□ 0.86
TSKU-204ENST00000533752 COPS6Q7L5N1 327 aa20.45■□□□□ 0.86
TSKU-204ENST00000533752 XAGE3Q8WTP9 111 aa20.45■□□□□ 0.86
TSKU-204ENST00000533752 NYXQ9GZU5 481 aa20.45■□□□□ 0.86
TSKU-204ENST00000533752 BCS1LQ9Y276 419 aa20.45■□□□□ 0.86
TSKU-204ENST00000533752 CHD4Q14839 1912 aa20.45■□□□□ 0.86
TSKU-204ENST00000533752 NUP98P52948 1817 aa20.44■□□□□ 0.86
TSKU-204ENST00000533752 H0YIN7 160 aa20.44■□□□□ 0.86
TSKU-204ENST00000533752 KCNA3P22001 575 aa20.44■□□□□ 0.86
TSKU-204ENST00000533752 CHRNA5P30532 468 aa20.44■□□□□ 0.86
TSKU-204ENST00000533752 DALRD3Q5D0E6 543 aaKnown RBP20.44■□□□□ 0.86
TSKU-204ENST00000533752 CCDC30Q5VVM6 783 aa20.44■□□□□ 0.86
TSKU-204ENST00000533752 C8orf58Q8NAV2 365 aa20.44■□□□□ 0.86
TSKU-204ENST00000533752 WWC3Q9ULE0 1092 aa20.44■□□□□ 0.86
TSKU-204ENST00000533752 FANCIQ9NVI1 1328 aa20.44■□□□□ 0.86
TSKU-204ENST00000533752 ELL2O00472 640 aaPredicted RBP20.43■□□□□ 0.86
TSKU-204ENST00000533752 AIMP1Q12904 312 aaKnown RBP20.43■□□□□ 0.86
TSKU-204ENST00000533752 PARP10Q53GL7 1025 aa20.43■□□□□ 0.86
TSKU-204ENST00000533752 C2CD5Q86YS7 1000 aa20.43■□□□□ 0.86
TSKU-204ENST00000533752 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
TSKU-204ENST00000533752 DLEC1Q9Y238 1755 aa20.43■□□□□ 0.86
TSKU-204ENST00000533752 GTF2E1P29083 439 aaPredicted RBP20.42■□□□□ 0.86
TSKU-204ENST00000533752 ANKRD31Q8N7Z5 1873 aa20.41■□□□□ 0.86
TSKU-204ENST00000533752 GPTP24298 496 aa20.41■□□□□ 0.86
TSKU-204ENST00000533752 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
TSKU-204ENST00000533752 ZNF34Q8IZ26 560 aa20.41■□□□□ 0.86
TSKU-204ENST00000533752 PLBD2Q8NHP8 589 aa20.41■□□□□ 0.86
TSKU-204ENST00000533752 TWISTNBQ3B726 338 aaPredicted RBP20.4■□□□□ 0.86
TSKU-204ENST00000533752 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
TSKU-204ENST00000533752 UBN2Q6ZU65 1347 aa20.4■□□□□ 0.86
TSKU-204ENST00000533752 PPP1R42Q7Z4L9 355 aa20.4■□□□□ 0.86
TSKU-204ENST00000533752 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
TSKU-204ENST00000533752 ARFGEF1Q9Y6D6 1849 aa20.4■□□□□ 0.86
TSKU-204ENST00000533752 RIC1Q4ADV7 1423 aa20.39■□□□□ 0.85
TSKU-204ENST00000533752 ZNF521Q96K83 1311 aa20.39■□□□□ 0.85
TSKU-204ENST00000533752 TSPYL6Q8N831 410 aa20.39■□□□□ 0.85
TSKU-204ENST00000533752 TTLL6Q8N841 843 aa20.39■□□□□ 0.85
TSKU-204ENST00000533752 FAM177BA6PVY3 158 aa20.38■□□□□ 0.85
TSKU-204ENST00000533752 ANKRD13DQ6ZTN6 518 aa20.38■□□□□ 0.85
TSKU-204ENST00000533752 CCDC24Q8N4L8 307 aa20.38■□□□□ 0.85
TSKU-204ENST00000533752 ANKRD36CQ5JPF3 1778 aa20.38■□□□□ 0.85
TSKU-204ENST00000533752 COL11A2P13942 1736 aaPredicted RBP20.37■□□□□ 0.85
TSKU-204ENST00000533752 TCIRG1Q13488 830 aa20.37■□□□□ 0.85
TSKU-204ENST00000533752 STYK1Q6J9G0 422 aa20.37■□□□□ 0.85
TSKU-204ENST00000533752 KLRG2A4D1S0 409 aaPredicted RBP20.36■□□□□ 0.85
TSKU-204ENST00000533752 NTSR2O95665 410 aa20.36■□□□□ 0.85
TSKU-204ENST00000533752 DDX58O95786 925 aaKnown RBP20.36■□□□□ 0.85
TSKU-204ENST00000533752 SRGNP10124 158 aa20.36■□□□□ 0.85
TSKU-204ENST00000533752 SUSD4Q5VX71 490 aa20.36■□□□□ 0.85
TSKU-204ENST00000533752 CNKSR1Q969H4 720 aa20.36■□□□□ 0.85
TSKU-204ENST00000533752 ZNF622Q969S3 477 aaKnown RBP eCLIP20.36■□□□□ 0.85
TSKU-204ENST00000533752 MASTLQ96GX5 879 aa20.36■□□□□ 0.85
TSKU-204ENST00000533752 UTP14AQ9BVJ6 771 aaKnown RBP20.36■□□□□ 0.85
TSKU-204ENST00000533752 NPR1P16066 1061 aa20.35■□□□□ 0.85
TSKU-204ENST00000533752 ABCC12Q96J65 1359 aa20.34■□□□□ 0.85
TSKU-204ENST00000533752 ARHGAP27Q6ZUM4 889 aa20.34■□□□□ 0.85
TSKU-204ENST00000533752 RIC3Q7Z5B4 369 aa20.34■□□□□ 0.85
TSKU-204ENST00000533752 NLRP10Q86W26 655 aa20.34■□□□□ 0.85
TSKU-204ENST00000533752 NUTM1Q86Y26 1132 aa20.34■□□□□ 0.85
TSKU-204ENST00000533752 E9PSI1 815 aa20.33■□□□□ 0.85
TSKU-204ENST00000533752 EXOSC9Q06265 439 aaKnown RBP20.33■□□□□ 0.85
TSKU-204ENST00000533752 ERFEQ4G0M1 354 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms