RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 SETDB2Q96T68 719 aa23.47■■□□□ 1.35
SMG1-203ENST00000532700 GPBP1L1Q9HC44 474 aaPredicted RBP23.47■■□□□ 1.35
SMG1-203ENST00000532700 TSPYL4Q9UJ04 414 aa23.47■■□□□ 1.35
SMG1-203ENST00000532700 TIAM2Q8IVF5 1701 aa23.47■■□□□ 1.35
SMG1-203ENST00000532700 C9orf131Q5VYM1 1079 aa23.46■■□□□ 1.35
SMG1-203ENST00000532700 FER1L6Q2WGJ9 1857 aa23.45■■□□□ 1.35
SMG1-203ENST00000532700 MYL6BP14649 208 aa23.45■■□□□ 1.34
SMG1-203ENST00000532700 LRP10Q7Z4F1 713 aa23.45■■□□□ 1.34
SMG1-203ENST00000532700 CNBD1Q8NA66 436 aa23.45■■□□□ 1.34
SMG1-203ENST00000532700 RUNDC1Q96C34 613 aa23.45■■□□□ 1.34
SMG1-203ENST00000532700 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
SMG1-203ENST00000532700 PROSER3Q2NL68 480 aa23.44■■□□□ 1.34
SMG1-203ENST00000532700 BRIP1Q9BX63 1249 aa23.44■■□□□ 1.34
SMG1-203ENST00000532700 FAM177BA6PVY3 158 aa23.43■■□□□ 1.34
SMG1-203ENST00000532700 H0YIN7 160 aa23.43■■□□□ 1.34
SMG1-203ENST00000532700 KIF3CO14782 793 aa23.43■■□□□ 1.34
SMG1-203ENST00000532700 ANXA1P04083 346 aa23.43■■□□□ 1.34
SMG1-203ENST00000532700 PDIA6Q15084 440 aa23.43■■□□□ 1.34
SMG1-203ENST00000532700 CLEC4GQ6UXB4 293 aa23.43■■□□□ 1.34
SMG1-203ENST00000532700 NPM2Q86SE8 214 aaKnown RBP23.43■■□□□ 1.34
SMG1-203ENST00000532700 TTLL6Q8N841 843 aa23.43■■□□□ 1.34
SMG1-203ENST00000532700 NFKBIEO00221 500 aa23.42■■□□□ 1.34
SMG1-203ENST00000532700 ZNF219Q9P2Y4 722 aaPredicted RBP23.42■■□□□ 1.34
SMG1-203ENST00000532700 NIP7Q9Y221 180 aaKnown RBP eCLIP23.42■■□□□ 1.34
SMG1-203ENST00000532700 ZNF622Q969S3 477 aaKnown RBP eCLIP23.41■■□□□ 1.34
SMG1-203ENST00000532700 RNF181Q9P0P0 153 aa23.41■■□□□ 1.34
SMG1-203ENST00000532700 ABCC12Q96J65 1359 aa23.4■■□□□ 1.34
SMG1-203ENST00000532700 NBPF5PQ86XG9 351 aaPredicted RBP23.4■■□□□ 1.34
SMG1-203ENST00000532700 NECTIN2Q92692 538 aa23.4■■□□□ 1.34
SMG1-203ENST00000532700 ZBTB3Q9H5J0 574 aa23.4■■□□□ 1.34
SMG1-203ENST00000532700 NMRK2Q9NPI5 230 aa23.4■■□□□ 1.34
SMG1-203ENST00000532700 ANKRD36CQ5JPF3 1778 aa23.4■■□□□ 1.34
SMG1-203ENST00000532700 MAP3K15Q6ZN16 1313 aa23.39■■□□□ 1.34
SMG1-203ENST00000532700 UBN2Q6ZU65 1347 aa23.39■■□□□ 1.34
SMG1-203ENST00000532700 SRGNP10124 158 aa23.39■■□□□ 1.33
SMG1-203ENST00000532700 EIF2S2P20042 333 aaKnown RBP23.39■■□□□ 1.33
SMG1-203ENST00000532700 PDE6BP35913 854 aa23.39■■□□□ 1.33
SMG1-203ENST00000532700 ZNF652Q9Y2D9 606 aa23.39■■□□□ 1.33
SMG1-203ENST00000532700 SENP3-EIF4A1A0A087X0R7 540 aa23.38■■□□□ 1.33
SMG1-203ENST00000532700 CHL1O00533 1208 aa23.38■■□□□ 1.33
SMG1-203ENST00000532700 LMOD3Q0VAK6 560 aa23.38■■□□□ 1.33
SMG1-203ENST00000532700 C21orf2O43822 256 aa23.37■■□□□ 1.33
SMG1-203ENST00000532700 ST5P78524 1137 aa23.37■■□□□ 1.33
SMG1-203ENST00000532700 SLC51AQ86UW1 340 aa23.37■■□□□ 1.33
SMG1-203ENST00000532700 LAS1LQ9Y4W2 734 aaKnown RBP23.37■■□□□ 1.33
SMG1-203ENST00000532700 DICER1Q9UPY3 1922 aaKnown RBP23.37■■□□□ 1.33
SMG1-203ENST00000532700 GPTP24298 496 aa23.36■■□□□ 1.33
SMG1-203ENST00000532700 NUTM1Q86Y26 1132 aa23.36■■□□□ 1.33
SMG1-203ENST00000532700 APAF1O14727 1248 aa23.35■■□□□ 1.33
SMG1-203ENST00000532700 RGL2O15211 777 aa23.35■■□□□ 1.33
SMG1-203ENST00000532700 NPHP1O15259 732 aa23.35■■□□□ 1.33
SMG1-203ENST00000532700 PRPF40BQ6NWY9 871 aaKnown RBP23.35■■□□□ 1.33
SMG1-203ENST00000532700 OLFM4Q6UX06 510 aa23.35■■□□□ 1.33
SMG1-203ENST00000532700 BABAM1Q9NWV8 329 aa23.35■■□□□ 1.33
SMG1-203ENST00000532700 KLRG2A4D1S0 409 aaPredicted RBP23.34■■□□□ 1.33
SMG1-203ENST00000532700 ERVV-1B6SEH8 477 aa23.34■■□□□ 1.33
SMG1-203ENST00000532700 LAMB2P55268 1798 aa23.34■■□□□ 1.33
SMG1-203ENST00000532700 ERBB4Q15303 1308 aa23.33■■□□□ 1.33
SMG1-203ENST00000532700 STYK1Q6J9G0 422 aa23.33■■□□□ 1.33
SMG1-203ENST00000532700 ERFEQ4G0M1 354 aa23.32■■□□□ 1.32
SMG1-203ENST00000532700 SUSD4Q5VX71 490 aa23.32■■□□□ 1.32
SMG1-203ENST00000532700 KIF6Q6ZMV9 814 aa23.32■■□□□ 1.32
SMG1-203ENST00000532700 ZNF34Q8IZ26 560 aa23.32■■□□□ 1.32
SMG1-203ENST00000532700 LMNB1P20700 586 aa23.31■■□□□ 1.32
SMG1-203ENST00000532700 C3orf67Q6ZVT6 689 aa23.31■■□□□ 1.32
SMG1-203ENST00000532700 C7orf43Q8WVR3 580 aa23.31■■□□□ 1.32
SMG1-203ENST00000532700 MASTLQ96GX5 879 aa23.31■■□□□ 1.32
SMG1-203ENST00000532700 MBIPQ9NS73 344 aa23.31■■□□□ 1.32
SMG1-203ENST00000532700 TPTE2Q6XPS3 522 aa23.3■■□□□ 1.32
SMG1-203ENST00000532700 GIGYF2Q6Y7W6 1299 aaKnown RBP23.3■■□□□ 1.32
SMG1-203ENST00000532700 PDZRN3Q9UPQ7 1066 aa23.3■■□□□ 1.32
SMG1-203ENST00000532700 ZNF316A6NFI3 1004 aaPredicted RBP23.29■■□□□ 1.32
SMG1-203ENST00000532700 NTSR2O95665 410 aa23.29■■□□□ 1.32
SMG1-203ENST00000532700 ZNF853P0CG23 659 aa23.29■■□□□ 1.32
SMG1-203ENST00000532700 XAGE3Q8WTP9 111 aa23.29■■□□□ 1.32
SMG1-203ENST00000532700 ZNF428Q96B54 188 aa23.29■■□□□ 1.32
SMG1-203ENST00000532700 CHPF2Q9P2E5 772 aa23.29■■□□□ 1.32
SMG1-203ENST00000532700 SNED1Q8TER0 1413 aa23.28■■□□□ 1.32
SMG1-203ENST00000532700 AIMP1Q12904 312 aaKnown RBP23.28■■□□□ 1.32
SMG1-203ENST00000532700 COPS6Q7L5N1 327 aa23.28■■□□□ 1.32
SMG1-203ENST00000532700 CNKSR1Q969H4 720 aa23.28■■□□□ 1.32
SMG1-203ENST00000532700 NPR1P16066 1061 aa23.27■■□□□ 1.32
SMG1-203ENST00000532700 CFAP44Q96MT7 982 aa23.27■■□□□ 1.32
SMG1-203ENST00000532700 IBTKQ9P2D0 1353 aaPredicted RBP23.27■■□□□ 1.31
SMG1-203ENST00000532700 RRAGCQ9HB90 399 aa23.26■■□□□ 1.31
SMG1-203ENST00000532700 RIC1Q4ADV7 1423 aa23.25■■□□□ 1.31
SMG1-203ENST00000532700 CRY2Q49AN0 593 aa23.25■■□□□ 1.31
SMG1-203ENST00000532700 SYNE4Q8N205 404 aa23.25■■□□□ 1.31
SMG1-203ENST00000532700 DDX21Q9NR30 783 aaKnown RBP eCLIP23.25■■□□□ 1.31
SMG1-203ENST00000532700 DDX60Q8IY21 1712 aaKnown RBP23.25■■□□□ 1.31
SMG1-203ENST00000532700 TAF1P21675 1872 aa23.24■■□□□ 1.31
SMG1-203ENST00000532700 DUSP27Q5VZP5 1158 aa23.24■■□□□ 1.31
SMG1-203ENST00000532700 COL4A5P29400 1685 aa23.24■■□□□ 1.31
SMG1-203ENST00000532700 LTBP3Q9NS15 1303 aa23.24■■□□□ 1.31
SMG1-203ENST00000532700 COL4A1P02462 1669 aa23.23■■□□□ 1.31
SMG1-203ENST00000532700 WDR90Q96KV7 1748 aa23.23■■□□□ 1.31
SMG1-203ENST00000532700 GTF2E1P29083 439 aaPredicted RBP23.23■■□□□ 1.31
SMG1-203ENST00000532700 HDGFL1Q5TGJ6 251 aa23.23■■□□□ 1.31
SMG1-203ENST00000532700 NYXQ9GZU5 481 aa23.22■■□□□ 1.31
SMG1-203ENST00000532700 TAOK3Q9H2K8 898 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms