RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 HS3ST6Q96QI5 342 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 ZBTB1Q9Y2K1 713 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 RGPD3A6NKT7 1758 aaPredicted RBP10.41□□□□□ -0.74
TRIM49-202ENST00000532501 RGPD4Q7Z3J3 1758 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 NBPF26B4DH59 902 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 TCERG1O14776 1098 aaKnown RBP10.41□□□□□ -0.74
TRIM49-202ENST00000532501 A1BGP04217 495 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 PROSER3Q2NL68 480 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 NBPF14Q5TI25 921 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 NBPF10Q6P3W6 841 aaKnown RBP10.41□□□□□ -0.74
TRIM49-202ENST00000532501 NBPF15Q8N660 670 aa10.41□□□□□ -0.74
TRIM49-202ENST00000532501 CICQ96RK0 1608 aaPredicted RBP10.4□□□□□ -0.74
TRIM49-202ENST00000532501 MYH14Q7Z406 1995 aaKnown RBP10.4□□□□□ -0.75
TRIM49-202ENST00000532501 FAM205CA6NFA0 338 aa10.4□□□□□ -0.75
TRIM49-202ENST00000532501 CRKLP46109 303 aaKnown RBP10.4□□□□□ -0.75
TRIM49-202ENST00000532501 LRP10Q7Z4F1 713 aa10.4□□□□□ -0.75
TRIM49-202ENST00000532501 RASEFQ8IZ41 740 aa10.4□□□□□ -0.75
TRIM49-202ENST00000532501 NGEFQ8N5V2 710 aa10.4□□□□□ -0.75
TRIM49-202ENST00000532501 BABAM1Q9NWV8 329 aa10.4□□□□□ -0.75
TRIM49-202ENST00000532501 C4BP0C0L5 1744 aa10.39□□□□□ -0.75
TRIM49-202ENST00000532501 COL5A3P25940 1745 aaPredicted RBP10.39□□□□□ -0.75
TRIM49-202ENST00000532501 SNRPA1P09661 255 aaKnown RBP10.39□□□□□ -0.75
TRIM49-202ENST00000532501 PDIA6Q15084 440 aa10.39□□□□□ -0.75
TRIM49-202ENST00000532501 SLC27A3Q5K4L6 730 aa10.39□□□□□ -0.75
TRIM49-202ENST00000532501 E9PSI1 815 aa10.38□□□□□ -0.75
TRIM49-202ENST00000532501 CALD1Q05682 793 aaKnown RBP10.38□□□□□ -0.75
TRIM49-202ENST00000532501 VSIG10Q8N0Z9 540 aa10.38□□□□□ -0.75
TRIM49-202ENST00000532501 SGIP1Q9BQI5 828 aa10.38□□□□□ -0.75
TRIM49-202ENST00000532501 TMEM106CQ9BVX2 250 aa10.38□□□□□ -0.75
TRIM49-202ENST00000532501 TAF1LQ8IZX4 1826 aa10.38□□□□□ -0.75
TRIM49-202ENST00000532501 CNTNAP4Q9C0A0 1308 aa10.37□□□□□ -0.75
TRIM49-202ENST00000532501 ZNF831Q5JPB2 1677 aa10.37□□□□□ -0.75
TRIM49-202ENST00000532501 TUBGCP6Q96RT7 1819 aa10.37□□□□□ -0.75
TRIM49-202ENST00000532501 POTEB3A0JP26 581 aa10.37□□□□□ -0.75
TRIM49-202ENST00000532501 PSDA5PKW4 1024 aaPredicted RBP10.37□□□□□ -0.75
TRIM49-202ENST00000532501 GNPATO15228 680 aa10.37□□□□□ -0.75
TRIM49-202ENST00000532501 VAMP4O75379 141 aa10.37□□□□□ -0.75
TRIM49-202ENST00000532501 EIF2S2P20042 333 aaKnown RBP10.37□□□□□ -0.75
TRIM49-202ENST00000532501 IRX5P78411 483 aaPredicted RBP10.37□□□□□ -0.75
TRIM49-202ENST00000532501 POTEBQ6S5H4 581 aa10.37□□□□□ -0.75
TRIM49-202ENST00000532501 SOS1Q07889 1333 aaPredicted RBP10.37□□□□□ -0.75
TRIM49-202ENST00000532501 PNPLA7Q6ZV29 1317 aa10.37□□□□□ -0.75
TRIM49-202ENST00000532501 PHF14O94880 888 aa10.36□□□□□ -0.75
TRIM49-202ENST00000532501 CANXP27824 592 aaKnown RBP10.36□□□□□ -0.75
TRIM49-202ENST00000532501 R3HDM1Q15032 1099 aaKnown RBP10.36□□□□□ -0.75
TRIM49-202ENST00000532501 SLC15A2Q16348 729 aa10.36□□□□□ -0.75
TRIM49-202ENST00000532501 TWISTNBQ3B726 338 aaPredicted RBP10.36□□□□□ -0.75
TRIM49-202ENST00000532501 MYH16Q9H6N6 1097 aa10.36□□□□□ -0.75
TRIM49-202ENST00000532501 CCDC87Q9NVE4 849 aa10.36□□□□□ -0.75
TRIM49-202ENST00000532501 CHPF2Q9P2E5 772 aa10.36□□□□□ -0.75
TRIM49-202ENST00000532501 LAMB4A4D0S4 1761 aa10.35□□□□□ -0.75
TRIM49-202ENST00000532501 HDGFL1Q5TGJ6 251 aa10.35□□□□□ -0.75
TRIM49-202ENST00000532501 G2E3Q7L622 706 aa10.35□□□□□ -0.75
TRIM49-202ENST00000532501 COL23A1Q86Y22 540 aaPredicted RBP10.35□□□□□ -0.75
TRIM49-202ENST00000532501 SRP68Q9UHB9 627 aaKnown RBP10.35□□□□□ -0.75
TRIM49-202ENST00000532501 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.34□□□□□ -0.75
TRIM49-202ENST00000532501 EIF5P55010 431 aaKnown RBP10.34□□□□□ -0.75
TRIM49-202ENST00000532501 RC3H1Q5TC82 1133 aaKnown RBP10.34□□□□□ -0.75
TRIM49-202ENST00000532501 TTLL7Q6ZT98 887 aa10.34□□□□□ -0.75
TRIM49-202ENST00000532501 BCL2L13Q9BXK5 485 aa10.34□□□□□ -0.75
TRIM49-202ENST00000532501 UBR3Q6ZT12 1888 aa10.34□□□□□ -0.75
TRIM49-202ENST00000532501 RPS6KA4O75676 772 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 MYL6BP14649 208 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 AK7Q96M32 723 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 PHAXQ9H814 394 aaKnown RBP10.33□□□□□ -0.76
TRIM49-202ENST00000532501 BCL2L12Q9HB09 334 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 STK32BQ9NY57 414 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 COL15A1P39059 1388 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 STARD3NLO95772 234 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 HOXB7P09629 217 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 SSH1Q8WYL5 1049 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
TRIM49-202ENST00000532501 OCEL1Q9H607 264 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 TFCP2L1Q9NZI6 479 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 TNNQ9UQP3 1299 aa10.33□□□□□ -0.76
TRIM49-202ENST00000532501 ZNF330Q9Y3S2 320 aaPredicted RBP10.33□□□□□ -0.76
TRIM49-202ENST00000532501 MSL1Q68DK7 614 aa10.32□□□□□ -0.76
TRIM49-202ENST00000532501 XAGE3Q8WTP9 111 aa10.32□□□□□ -0.76
TRIM49-202ENST00000532501 RNF166Q96A37 237 aaPredicted RBP10.32□□□□□ -0.76
TRIM49-202ENST00000532501 DDX21Q9NR30 783 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRIM49-202ENST00000532501 TBC1D2BQ9UPU7 963 aa10.32□□□□□ -0.76
TRIM49-202ENST00000532501 C4AP0C0L4 1744 aa10.31□□□□□ -0.76
TRIM49-202ENST00000532501 CASZ1Q86V15 1759 aa10.31□□□□□ -0.76
TRIM49-202ENST00000532501 CAMTA2O94983 1202 aa10.31□□□□□ -0.76
TRIM49-202ENST00000532501 IL6STP40189 918 aaPredicted RBP10.31□□□□□ -0.76
TRIM49-202ENST00000532501 RARSP54136 660 aaKnown RBP10.31□□□□□ -0.76
TRIM49-202ENST00000532501 HLFQ16534 295 aa10.31□□□□□ -0.76
TRIM49-202ENST00000532501 MRPL50Q8N5N7 158 aaKnown RBP10.31□□□□□ -0.76
TRIM49-202ENST00000532501 ZNF428Q96B54 188 aa10.31□□□□□ -0.76
TRIM49-202ENST00000532501 TEX13AQ9BXU3 409 aaPredicted RBP10.31□□□□□ -0.76
TRIM49-202ENST00000532501 RTCBQ9Y3I0 505 aaKnown RBP10.31□□□□□ -0.76
TRIM49-202ENST00000532501 ZBTB7AO95365 584 aa10.3□□□□□ -0.76
TRIM49-202ENST00000532501 SSFA2P28290 1259 aa10.3□□□□□ -0.76
TRIM49-202ENST00000532501 AIMP1Q12904 312 aaKnown RBP10.3□□□□□ -0.76
TRIM49-202ENST00000532501 IFNL1Q8IU54 200 aa10.3□□□□□ -0.76
TRIM49-202ENST00000532501 ERBB4Q15303 1308 aa10.3□□□□□ -0.76
TRIM49-202ENST00000532501 USP42Q9H9J4 1324 aaKnown RBP10.3□□□□□ -0.76
TRIM49-202ENST00000532501 BCAR3O75815 825 aa10.29□□□□□ -0.76
TRIM49-202ENST00000532501 GYS1P13807 737 aa10.29□□□□□ -0.76
TRIM49-202ENST00000532501 FKBP8Q14318 412 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms