RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 PPRC1Q5VV67 1664 aaKnown RBP8.46□□□□□ -1.05
AMBRA1-209ENST00000529963 CDK2AP1O14519 115 aa8.46□□□□□ -1.05
AMBRA1-209ENST00000529963 ATP2B4P23634 1241 aa8.46□□□□□ -1.05
AMBRA1-209ENST00000529963 OCLNQ16625 522 aa8.46□□□□□ -1.05
AMBRA1-209ENST00000529963 MKNK1Q9BUB5 465 aa8.46□□□□□ -1.05
AMBRA1-209ENST00000529963 CABP1Q9NZU7 370 aa8.46□□□□□ -1.05
AMBRA1-209ENST00000529963 ZCCHC11Q5TAX3 1644 aaKnown RBP8.46□□□□□ -1.06
AMBRA1-209ENST00000529963 GOLGA3Q08378 1498 aa8.46□□□□□ -1.06
AMBRA1-209ENST00000529963 PPP1R12BO60237 982 aaPredicted RBP8.45□□□□□ -1.06
AMBRA1-209ENST00000529963 MAN1A2O60476 641 aa8.45□□□□□ -1.06
AMBRA1-209ENST00000529963 WEE1P30291 646 aa8.45□□□□□ -1.06
AMBRA1-209ENST00000529963 GPC1P35052 558 aa8.45□□□□□ -1.06
AMBRA1-209ENST00000529963 CAPN12Q6ZSI9 719 aa8.45□□□□□ -1.06
AMBRA1-209ENST00000529963 LYSMD3Q7Z3D4 306 aa8.45□□□□□ -1.06
AMBRA1-209ENST00000529963 PPARGC1BQ86YN6 1023 aaKnown RBP8.45□□□□□ -1.06
AMBRA1-209ENST00000529963 SNRPBP14678 240 aaKnown RBP8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 GTF2E1P29083 439 aaPredicted RBP8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 FKBP5Q13451 457 aaPredicted RBP8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 C4orf17Q53FE4 359 aa8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 PHLDB3Q6NSJ2 640 aa8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 ZDHHC1Q8WTX9 485 aa8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 MAP3K4Q9Y6R4 1608 aa8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 WDR7Q9Y4E6 1490 aa8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 SPATA31D1Q6ZQQ2 1576 aa8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 PLA2G4AP47712 749 aa8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 GNASQ5JWF2 1037 aa8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 ZNF295-AS1Q8N0V1 137 aa8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 CXXC1Q9P0U4 656 aaPredicted RBP8.44□□□□□ -1.06
AMBRA1-209ENST00000529963 SSFA2P28290 1259 aa8.43□□□□□ -1.06
AMBRA1-209ENST00000529963 NBPF10Q6P3W6 841 aaKnown RBP8.43□□□□□ -1.06
AMBRA1-209ENST00000529963 FAM9AQ8IZU1 332 aaPredicted RBP8.43□□□□□ -1.06
AMBRA1-209ENST00000529963 NBPF15Q8N660 670 aa8.43□□□□□ -1.06
AMBRA1-209ENST00000529963 RHBDD1Q8TEB9 315 aa8.43□□□□□ -1.06
AMBRA1-209ENST00000529963 TRAIPQ9BWF2 469 aa8.43□□□□□ -1.06
AMBRA1-209ENST00000529963 ZNF232Q9UNY5 417 aa8.43□□□□□ -1.06
AMBRA1-209ENST00000529963 CTTNBP2Q8WZ74 1663 aa8.43□□□□□ -1.06
AMBRA1-209ENST00000529963 PRXQ9BXM0 1461 aa8.42□□□□□ -1.06
AMBRA1-209ENST00000529963 COL17A1Q9UMD9 1497 aaPredicted RBP8.42□□□□□ -1.06
AMBRA1-209ENST00000529963 AEBP1Q8IUX7 1158 aa8.42□□□□□ -1.06
AMBRA1-209ENST00000529963 L3MBTL2Q969R5 705 aa8.42□□□□□ -1.06
AMBRA1-209ENST00000529963 AIDAQ96BJ3 306 aa8.42□□□□□ -1.06
AMBRA1-209ENST00000529963 NIFKQ9BYG3 293 aaKnown RBP8.42□□□□□ -1.06
AMBRA1-209ENST00000529963 HCN4Q9Y3Q4 1203 aa8.42□□□□□ -1.06
AMBRA1-209ENST00000529963 C11orf95C9JLR9 678 aaPredicted RBP8.41□□□□□ -1.06
AMBRA1-209ENST00000529963 IGFBP4P22692 258 aa8.41□□□□□ -1.06
AMBRA1-209ENST00000529963 NOS2P35228 1153 aa8.41□□□□□ -1.06
AMBRA1-209ENST00000529963 PDE4CQ08493 712 aa8.41□□□□□ -1.06
AMBRA1-209ENST00000529963 TAS1R3Q7RTX0 852 aa8.41□□□□□ -1.06
AMBRA1-209ENST00000529963 NGLY1Q96IV0 654 aa8.41□□□□□ -1.06
AMBRA1-209ENST00000529963 TRIM47Q96LD4 638 aa8.41□□□□□ -1.06
AMBRA1-209ENST00000529963 SENP2Q9HC62 589 aa8.41□□□□□ -1.06
AMBRA1-209ENST00000529963 ABCA8O94911 1581 aa8.41□□□□□ -1.06
AMBRA1-209ENST00000529963 SERTM1A2A2V5 107 aa8.4□□□□□ -1.06
AMBRA1-209ENST00000529963 TXLNAP40222 546 aa8.4□□□□□ -1.06
AMBRA1-209ENST00000529963 PSMA6P60900 246 aaKnown RBP8.4□□□□□ -1.06
AMBRA1-209ENST00000529963 NAA30Q147X3 362 aaPredicted RBP8.4□□□□□ -1.06
AMBRA1-209ENST00000529963 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.4□□□□□ -1.06
AMBRA1-209ENST00000529963 C2orf49Q9BVC5 232 aaPredicted RBP8.4□□□□□ -1.06
AMBRA1-209ENST00000529963 CD109Q6YHK3 1445 aa8.4□□□□□ -1.06
AMBRA1-209ENST00000529963 MAGI3Q5TCQ9 1506 aa8.4□□□□□ -1.07
AMBRA1-209ENST00000529963 SPATA31C2B4DYI2 1134 aa8.39□□□□□ -1.07
AMBRA1-209ENST00000529963 TEAD4Q15561 434 aa8.39□□□□□ -1.07
AMBRA1-209ENST00000529963 SEPT3Q9UH03 358 aa8.39□□□□□ -1.07
AMBRA1-209ENST00000529963 EML1O00423 815 aa8.39□□□□□ -1.07
AMBRA1-209ENST00000529963 PCF11O94913 1555 aaKnown RBP8.39□□□□□ -1.07
AMBRA1-209ENST00000529963 KIFC2Q96AC6 838 aa8.39□□□□□ -1.07
AMBRA1-209ENST00000529963 TIMMDC1Q9NPL8 285 aa8.39□□□□□ -1.07
AMBRA1-209ENST00000529963 PTSQ03393 145 aa8.38□□□□□ -1.07
AMBRA1-209ENST00000529963 VTI1AQ96AJ9 217 aa8.38□□□□□ -1.07
AMBRA1-209ENST00000529963 KLRG1Q96E93 195 aa8.38□□□□□ -1.07
AMBRA1-209ENST00000529963 GPAMQ9HCL2 828 aa8.38□□□□□ -1.07
AMBRA1-209ENST00000529963 CHMP3Q9Y3E7 222 aa8.38□□□□□ -1.07
AMBRA1-209ENST00000529963 CFAP43Q8NDM7 1665 aa8.38□□□□□ -1.07
AMBRA1-209ENST00000529963 SENP3-EIF4A1A0A087X0R7 540 aa8.37□□□□□ -1.07
AMBRA1-209ENST00000529963 FOXO3O43524 673 aa8.37□□□□□ -1.07
AMBRA1-209ENST00000529963 GAS2L1Q99501 681 aaPredicted RBP8.37□□□□□ -1.07
AMBRA1-209ENST00000529963 PTPRMP28827 1452 aa8.36□□□□□ -1.07
AMBRA1-209ENST00000529963 BRD1O95696 1058 aa8.36□□□□□ -1.07
AMBRA1-209ENST00000529963 PHACTR1Q9C0D0 580 aa8.36□□□□□ -1.07
AMBRA1-209ENST00000529963 SAP130Q9H0E3 1048 aa8.36□□□□□ -1.07
AMBRA1-209ENST00000529963 ALDH16A1Q8IZ83 802 aa8.35□□□□□ -1.07
AMBRA1-209ENST00000529963 ANO2Q9NQ90 1003 aa8.35□□□□□ -1.07
AMBRA1-209ENST00000529963 MSX1P28360 303 aa8.34□□□□□ -1.07
AMBRA1-209ENST00000529963 SERPINB4P48594 390 aa8.34□□□□□ -1.07
AMBRA1-209ENST00000529963 STAG2Q8N3U4 1231 aa8.34□□□□□ -1.07
AMBRA1-209ENST00000529963 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.07
AMBRA1-209ENST00000529963 ATP10BO94823 1461 aa8.34□□□□□ -1.07
AMBRA1-209ENST00000529963 ATP4AP20648 1035 aa8.34□□□□□ -1.08
AMBRA1-209ENST00000529963 MTMR3Q13615 1198 aa8.34□□□□□ -1.08
AMBRA1-209ENST00000529963 NBPF1Q3BBV0 1214 aa8.34□□□□□ -1.08
AMBRA1-209ENST00000529963 B4GALNT3Q6L9W6 998 aa8.34□□□□□ -1.08
AMBRA1-209ENST00000529963 POTEAQ6S8J7 498 aa8.34□□□□□ -1.08
AMBRA1-209ENST00000529963 RUBCNLQ9H714 662 aa8.34□□□□□ -1.08
AMBRA1-209ENST00000529963 PHLDB1Q86UU1 1377 aa8.33□□□□□ -1.08
AMBRA1-209ENST00000529963 KIF21BO75037 1637 aa8.33□□□□□ -1.08
AMBRA1-209ENST00000529963 ABL1P00519 1130 aa8.33□□□□□ -1.08
AMBRA1-209ENST00000529963 WDR44Q5JSH3 913 aa8.33□□□□□ -1.08
AMBRA1-209ENST00000529963 ZNF787Q6DD87 383 aa8.33□□□□□ -1.08
AMBRA1-209ENST00000529963 RIPOR1Q6ZS17 1223 aa8.33□□□□□ -1.08
AMBRA1-209ENST00000529963 CCDC155Q8N6L0 562 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms