RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 TSR2Q969E8 191 aaKnown RBP9.23□□□□□ -0.93
FDFT1-213ENST00000528729 SEC16BQ96JE7 1060 aa9.23□□□□□ -0.93
FDFT1-213ENST00000528729 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
FDFT1-213ENST00000528729 MPHOSPH6Q99547 160 aaKnown RBP9.23□□□□□ -0.93
FDFT1-213ENST00000528729 NEUROD4Q9HD90 331 aa9.23□□□□□ -0.93
FDFT1-213ENST00000528729 GGT7Q9UJ14 662 aa9.23□□□□□ -0.93
FDFT1-213ENST00000528729 ZNF608Q9ULD9 1512 aaPredicted RBP9.22□□□□□ -0.93
FDFT1-213ENST00000528729 PNMA6FA0A0J9YX94 578 aa9.22□□□□□ -0.93
FDFT1-213ENST00000528729 FZD6O60353 706 aa9.22□□□□□ -0.93
FDFT1-213ENST00000528729 FGAP02671 866 aa9.22□□□□□ -0.93
FDFT1-213ENST00000528729 SSBP05455 408 aaKnown RBP eCLIP9.22□□□□□ -0.93
FDFT1-213ENST00000528729 CD53P19397 219 aa9.22□□□□□ -0.93
FDFT1-213ENST00000528729 NFX1Q12986 1120 aaKnown RBP9.22□□□□□ -0.93
FDFT1-213ENST00000528729 CYB5RLQ6IPT4 315 aa9.22□□□□□ -0.93
FDFT1-213ENST00000528729 ALKBH2Q6NS38 261 aa9.22□□□□□ -0.93
FDFT1-213ENST00000528729 LYPD8Q6UX82 237 aa9.22□□□□□ -0.93
FDFT1-213ENST00000528729 WDR75Q8IWA0 830 aaKnown RBP9.22□□□□□ -0.93
FDFT1-213ENST00000528729 TRIM55Q9BYV6 548 aa9.22□□□□□ -0.93
FDFT1-213ENST00000528729 AVENQ9NQS1 362 aaPredicted RBP9.22□□□□□ -0.93
FDFT1-213ENST00000528729 CCDC87Q9NVE4 849 aa9.22□□□□□ -0.93
FDFT1-213ENST00000528729 LGR5O75473 907 aa9.21□□□□□ -0.94
FDFT1-213ENST00000528729 KRT18P05783 430 aaKnown RBP9.21□□□□□ -0.94
FDFT1-213ENST00000528729 MZF1P28698 734 aaPredicted RBP9.21□□□□□ -0.94
FDFT1-213ENST00000528729 MYBPC2Q14324 1141 aa9.21□□□□□ -0.94
FDFT1-213ENST00000528729 BMP2KQ9NSY1 1161 aaPredicted RBP9.21□□□□□ -0.94
FDFT1-213ENST00000528729 GPSM3Q9Y4H4 160 aa9.21□□□□□ -0.94
FDFT1-213ENST00000528729 PCDHB9Q9Y5E1 797 aa9.21□□□□□ -0.94
FDFT1-213ENST00000528729 SOGA1O94964 1423 aa9.21□□□□□ -0.94
FDFT1-213ENST00000528729 AQRO60306 1485 aaKnown RBP eCLIP9.21□□□□□ -0.943e-8■■■■■ 29.1
FDFT1-213ENST00000528729 M0R2N6 131 aa9.2□□□□□ -0.94
FDFT1-213ENST00000528729 HCLS1P14317 486 aaPredicted RBP9.2□□□□□ -0.94
FDFT1-213ENST00000528729 LMOD3Q0VAK6 560 aa9.2□□□□□ -0.94
FDFT1-213ENST00000528729 RAB33AQ14088 237 aa9.2□□□□□ -0.94
FDFT1-213ENST00000528729 ZNF280DQ6N043 979 aa9.2□□□□□ -0.94
FDFT1-213ENST00000528729 ANKS3Q6ZW76 656 aa9.2□□□□□ -0.94
FDFT1-213ENST00000528729 RETREG3Q86VR2 466 aa9.2□□□□□ -0.94
FDFT1-213ENST00000528729 RAVER1Q8IY67 606 aaKnown RBP9.2□□□□□ -0.94
FDFT1-213ENST00000528729 CHMP7Q8WUX9 453 aaPredicted RBP9.2□□□□□ -0.94
FDFT1-213ENST00000528729 PPM1EQ8WY54 764 aa9.2□□□□□ -0.94
FDFT1-213ENST00000528729 SYMPKQ92797 1274 aaKnown RBP9.2□□□□□ -0.94
FDFT1-213ENST00000528729 CNTN3Q9P232 1028 aa9.2□□□□□ -0.94
FDFT1-213ENST00000528729 CFAP69A5D8W1 941 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 FAM221BA6H8Z2 402 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 KLF4O43474 513 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 TSPAN6O43657 245 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 ZNF500O60304 480 aaPredicted RBP9.19□□□□□ -0.94
FDFT1-213ENST00000528729 MAN1A1P33908 653 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 HLTFQ14527 1009 aaKnown RBP eCLIP9.19□□□□□ -0.94
FDFT1-213ENST00000528729 BRD3Q15059 726 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 NFE2Q16621 373 aaPredicted RBP9.19□□□□□ -0.94
FDFT1-213ENST00000528729 TSGA10IPQ3SY00 556 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 KRT26Q7Z3Y9 468 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 PGBD3Q8N328 593 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 TRPM4Q8TD43 1214 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 ZNF700Q9H0M5 742 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 OCEL1Q9H607 264 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 KANSL2Q9H9L4 492 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 ARNT2Q9HBZ2 717 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 TSKSQ9UJT2 592 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 DOLKQ9UPQ8 538 aa9.19□□□□□ -0.94
FDFT1-213ENST00000528729 ESYT3A0FGR9 886 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 C3orf80F5H4A9 247 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 FOXO3O43524 673 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 EIF1AXP47813 144 aaKnown RBP9.18□□□□□ -0.94
FDFT1-213ENST00000528729 IRX5P78411 483 aaPredicted RBP9.18□□□□□ -0.94
FDFT1-213ENST00000528729 PPP2R5AQ15172 486 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 BRDTQ58F21 947 aaPredicted RBP9.18□□□□□ -0.94
FDFT1-213ENST00000528729 RNF20Q5VTR2 975 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 DNMBPQ6XZF7 1577 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 TDRD9Q8NDG6 1382 aaKnown RBP9.18□□□□□ -0.94
FDFT1-213ENST00000528729 TATDN2Q93075 761 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 CEP63Q96MT8 703 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 FEZ1Q99689 392 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 CFHR5Q9BXR6 569 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 TMX4Q9H1E5 349 aaPredicted RBP9.18□□□□□ -0.94
FDFT1-213ENST00000528729 CASS4Q9NQ75 786 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 MAP3K20Q9NYL2 800 aaKnown RBP9.18□□□□□ -0.94
FDFT1-213ENST00000528729 ANAPC4Q9UJX5 808 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 PNMA3Q9UL41 463 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 SCINQ9Y6U3 715 aa9.18□□□□□ -0.94
FDFT1-213ENST00000528729 FOSP01100 380 aaPredicted RBP9.17□□□□□ -0.94
FDFT1-213ENST00000528729 MYL1P05976 194 aa9.17□□□□□ -0.94
FDFT1-213ENST00000528729 EPHB1P54762 984 aa9.17□□□□□ -0.94
FDFT1-213ENST00000528729 SYCP2LQ5T4T6 812 aa9.17□□□□□ -0.94
FDFT1-213ENST00000528729 TTC39BQ5VTQ0 682 aaPredicted RBP9.17□□□□□ -0.94
FDFT1-213ENST00000528729 C16orf86Q6ZW13 317 aa9.17□□□□□ -0.94
FDFT1-213ENST00000528729 ADAM33Q9BZ11 813 aa9.17□□□□□ -0.94
FDFT1-213ENST00000528729 NIF3L1Q9GZT8 377 aa9.17□□□□□ -0.94
FDFT1-213ENST00000528729 PCDHGA11Q9Y5H2 935 aa9.17□□□□□ -0.94
FDFT1-213ENST00000528729 POLA1P09884 1462 aaPredicted RBP9.16□□□□□ -0.94
FDFT1-213ENST00000528729 KDM4FA0A1W2PPD8 638 aa9.16□□□□□ -0.94
FDFT1-213ENST00000528729 NRDCO43847 1150 aa9.16□□□□□ -0.94
FDFT1-213ENST00000528729 SLC10A3P09131 477 aa9.16□□□□□ -0.94
FDFT1-213ENST00000528729 IGFBP4P22692 258 aa9.16□□□□□ -0.94
FDFT1-213ENST00000528729 EIF4BP23588 611 aaKnown RBP9.16□□□□□ -0.94
FDFT1-213ENST00000528729 PTK2Q05397 1052 aa9.16□□□□□ -0.94
FDFT1-213ENST00000528729 AAMPQ13685 434 aa9.16□□□□□ -0.94
FDFT1-213ENST00000528729 ZNF454Q8N9F8 522 aa9.16□□□□□ -0.94
FDFT1-213ENST00000528729 ARPC5LQ9BPX5 153 aa9.16□□□□□ -0.94
FDFT1-213ENST00000528729 TMEM260Q9NX78 707 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms