RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 IFT57Q9NWB7 429 aa12.01□□□□□ -0.49
LINC00958-203ENST00000527945 ZNF652Q9Y2D9 606 aa12.01□□□□□ -0.49
LINC00958-203ENST00000527945 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
LINC00958-203ENST00000527945 CHD4Q14839 1912 aa12.01□□□□□ -0.49
LINC00958-203ENST00000527945 ANKRD36CQ5JPF3 1778 aa12□□□□□ -0.49
LINC00958-203ENST00000527945 ANKRD31Q8N7Z5 1873 aa12□□□□□ -0.49
LINC00958-203ENST00000527945 NFIXQ14938 502 aa12□□□□□ -0.49
LINC00958-203ENST00000527945 PDIA6Q15084 440 aa12□□□□□ -0.49
LINC00958-203ENST00000527945 PROSER3Q2NL68 480 aa12□□□□□ -0.49
LINC00958-203ENST00000527945 DZIP3Q86Y13 1208 aaKnown RBP12□□□□□ -0.49
LINC00958-203ENST00000527945 BRCA1P38398 1863 aaKnown RBP12□□□□□ -0.49
LINC00958-203ENST00000527945 ERVV-1B6SEH8 477 aa11.99□□□□□ -0.49
LINC00958-203ENST00000527945 CAMTA2O94983 1202 aa11.99□□□□□ -0.49
LINC00958-203ENST00000527945 C1QTNF8P60827 252 aa11.99□□□□□ -0.49
LINC00958-203ENST00000527945 TSPYL6Q8N831 410 aa11.99□□□□□ -0.49
LINC00958-203ENST00000527945 C8orf58Q8NAV2 365 aa11.99□□□□□ -0.49
LINC00958-203ENST00000527945 N4BP2Q86UW6 1770 aaPredicted RBP11.99□□□□□ -0.49
LINC00958-203ENST00000527945 ARFGEF2Q9Y6D5 1785 aa11.99□□□□□ -0.49
LINC00958-203ENST00000527945 CARMIL3Q8ND23 1372 aa11.98□□□□□ -0.49
LINC00958-203ENST00000527945 FANCIQ9NVI1 1328 aa11.98□□□□□ -0.49
LINC00958-203ENST00000527945 ANXA1P04083 346 aa11.98□□□□□ -0.49
LINC00958-203ENST00000527945 DPEP1P16444 411 aa11.98□□□□□ -0.49
LINC00958-203ENST00000527945 HOXD11P31277 338 aaPredicted RBP11.98□□□□□ -0.49
LINC00958-203ENST00000527945 GNAI1P63096 354 aa11.98□□□□□ -0.49
LINC00958-203ENST00000527945 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
LINC00958-203ENST00000527945 SETDB2Q96T68 719 aa11.98□□□□□ -0.49
LINC00958-203ENST00000527945 TBC1D2BQ9UPU7 963 aa11.98□□□□□ -0.49
LINC00958-203ENST00000527945 COL11A2P13942 1736 aaPredicted RBP11.97□□□□□ -0.49
LINC00958-203ENST00000527945 IL16Q14005 1332 aa11.97□□□□□ -0.49
LINC00958-203ENST00000527945 A0A0G2JLW4 131 aa11.97□□□□□ -0.49
LINC00958-203ENST00000527945 SERPINB2P05120 415 aa11.97□□□□□ -0.49
LINC00958-203ENST00000527945 NECTIN2Q92692 538 aa11.97□□□□□ -0.49
LINC00958-203ENST00000527945 ZNF330Q9Y3S2 320 aaPredicted RBP11.97□□□□□ -0.49
LINC00958-203ENST00000527945 ATP10DQ9P241 1426 aa11.96□□□□□ -0.49
LINC00958-203ENST00000527945 DUSP27Q5VZP5 1158 aa11.96□□□□□ -0.49
LINC00958-203ENST00000527945 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.49
LINC00958-203ENST00000527945 BRIP1Q9BX63 1249 aa11.96□□□□□ -0.49
LINC00958-203ENST00000527945 PIM2Q9P1W9 311 aa11.96□□□□□ -0.49
LINC00958-203ENST00000527945 DLEC1Q9Y238 1755 aa11.96□□□□□ -0.49
LINC00958-203ENST00000527945 TNRC6CQ9HCJ0 1690 aaKnown RBP11.95□□□□□ -0.5
LINC00958-203ENST00000527945 PDE6BP35913 854 aa11.95□□□□□ -0.5
LINC00958-203ENST00000527945 KIF6Q6ZMV9 814 aa11.95□□□□□ -0.5
LINC00958-203ENST00000527945 TTLL7Q6ZT98 887 aa11.95□□□□□ -0.5
LINC00958-203ENST00000527945 WDR63Q8IWG1 891 aa11.95□□□□□ -0.5
LINC00958-203ENST00000527945 CACNA1FO60840 1977 aa11.94□□□□□ -0.5
LINC00958-203ENST00000527945 MAP3K15Q6ZN16 1313 aa11.94□□□□□ -0.5
LINC00958-203ENST00000527945 ELL2O00472 640 aaPredicted RBP11.94□□□□□ -0.5
LINC00958-203ENST00000527945 MYL6BP14649 208 aa11.94□□□□□ -0.5
LINC00958-203ENST00000527945 EIF2S2P20042 333 aaKnown RBP11.94□□□□□ -0.5
LINC00958-203ENST00000527945 TPTE2Q6XPS3 522 aa11.94□□□□□ -0.5
LINC00958-203ENST00000527945 CDCA7LQ96GN5 454 aa11.94□□□□□ -0.5
LINC00958-203ENST00000527945 DDX21Q9NR30 783 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC00958-203ENST00000527945 CHPF2Q9P2E5 772 aa11.94□□□□□ -0.5
LINC00958-203ENST00000527945 ST5P78524 1137 aa11.93□□□□□ -0.5
LINC00958-203ENST00000527945 HLFQ16534 295 aa11.93□□□□□ -0.5
LINC00958-203ENST00000527945 DALRD3Q5D0E6 543 aaKnown RBP11.93□□□□□ -0.5
LINC00958-203ENST00000527945 CNBD1Q8NA66 436 aa11.93□□□□□ -0.5
LINC00958-203ENST00000527945 NYXQ9GZU5 481 aa11.93□□□□□ -0.5
LINC00958-203ENST00000527945 DBF4Q9UBU7 674 aaPredicted RBP11.93□□□□□ -0.5
LINC00958-203ENST00000527945 BCS1LQ9Y276 419 aa11.93□□□□□ -0.5
LINC00958-203ENST00000527945 IBTKQ9P2D0 1353 aaPredicted RBP11.92□□□□□ -0.5
LINC00958-203ENST00000527945 LAMB2P55268 1798 aa11.92□□□□□ -0.5
LINC00958-203ENST00000527945 KLRG2A4D1S0 409 aaPredicted RBP11.92□□□□□ -0.5
LINC00958-203ENST00000527945 H0YIN7 160 aa11.92□□□□□ -0.5
LINC00958-203ENST00000527945 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
LINC00958-203ENST00000527945 PRR5LQ6MZQ0 368 aa11.92□□□□□ -0.5
LINC00958-203ENST00000527945 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
LINC00958-203ENST00000527945 BICDL1Q6ZP65 573 aa11.92□□□□□ -0.5
LINC00958-203ENST00000527945 NBPF5PQ86XG9 351 aaPredicted RBP11.92□□□□□ -0.5
LINC00958-203ENST00000527945 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
LINC00958-203ENST00000527945 NIP7Q9Y221 180 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00958-203ENST00000527945 CACNA1SQ13698 1873 aa11.91□□□□□ -0.5
LINC00958-203ENST00000527945 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
LINC00958-203ENST00000527945 ZC3H4Q9UPT8 1303 aaKnown RBP11.91□□□□□ -0.5
LINC00958-203ENST00000527945 TCERG1O14776 1098 aaKnown RBP11.91□□□□□ -0.5
LINC00958-203ENST00000527945 EXOSC9Q06265 439 aaKnown RBP11.91□□□□□ -0.5
LINC00958-203ENST00000527945 PARP10Q53GL7 1025 aa11.91□□□□□ -0.5
LINC00958-203ENST00000527945 HDGFL1Q5TGJ6 251 aa11.91□□□□□ -0.5
LINC00958-203ENST00000527945 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
LINC00958-203ENST00000527945 GPBP1L1Q9HC44 474 aaPredicted RBP11.91□□□□□ -0.5
LINC00958-203ENST00000527945 DDX60Q8IY21 1712 aaKnown RBP11.91□□□□□ -0.5
LINC00958-203ENST00000527945 KIF3CO14782 793 aa11.9□□□□□ -0.5
LINC00958-203ENST00000527945 NPHP1O15259 732 aa11.9□□□□□ -0.5
LINC00958-203ENST00000527945 VAMP4O75379 141 aa11.9□□□□□ -0.5
LINC00958-203ENST00000527945 CHRNA5P30532 468 aa11.9□□□□□ -0.5
LINC00958-203ENST00000527945 SLFN5Q08AF3 891 aa11.9□□□□□ -0.5
LINC00958-203ENST00000527945 ZNF34Q8IZ26 560 aa11.9□□□□□ -0.5
LINC00958-203ENST00000527945 TTLL6Q8N841 843 aa11.9□□□□□ -0.5
LINC00958-203ENST00000527945 UBN2Q6ZU65 1347 aa11.89□□□□□ -0.51
LINC00958-203ENST00000527945 RIC1Q4ADV7 1423 aa11.89□□□□□ -0.51
LINC00958-203ENST00000527945 ARFGEF1Q9Y6D6 1849 aa11.89□□□□□ -0.51
LINC00958-203ENST00000527945 TWISTNBQ3B726 338 aaPredicted RBP11.89□□□□□ -0.51
LINC00958-203ENST00000527945 STYK1Q6J9G0 422 aa11.89□□□□□ -0.51
LINC00958-203ENST00000527945 PPP1R42Q7Z4L9 355 aa11.89□□□□□ -0.51
LINC00958-203ENST00000527945 C2CD5Q86YS7 1000 aa11.89□□□□□ -0.51
LINC00958-203ENST00000527945 XAGE3Q8WTP9 111 aa11.89□□□□□ -0.51
LINC00958-203ENST00000527945 CNKSR1Q969H4 720 aa11.89□□□□□ -0.51
LINC00958-203ENST00000527945 ZBTB3Q9H5J0 574 aa11.89□□□□□ -0.51
LINC00958-203ENST00000527945 PHAXQ9H814 394 aaKnown RBP11.89□□□□□ -0.51
LINC00958-203ENST00000527945 COL4A1P02462 1669 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms