RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 NGEFQ8N5V2 710 aa22.53■■□□□ 1.2
CCNC-213ENST00000523541 ST5P78524 1137 aa22.52■■□□□ 1.2
CCNC-213ENST00000523541 PRR5LQ6MZQ0 368 aa22.52■■□□□ 1.2
CCNC-213ENST00000523541 CNBD1Q8NA66 436 aa22.52■■□□□ 1.2
CCNC-213ENST00000523541 CFAP44Q96MT7 982 aa22.52■■□□□ 1.2
CCNC-213ENST00000523541 ADCY9O60503 1353 aa22.51■■□□□ 1.19
CCNC-213ENST00000523541 APAF1O14727 1248 aa22.51■■□□□ 1.19
CCNC-213ENST00000523541 HOXB7P09629 217 aa22.51■■□□□ 1.19
CCNC-213ENST00000523541 TPTE2Q6XPS3 522 aa22.51■■□□□ 1.19
CCNC-213ENST00000523541 ZNF622Q969S3 477 aaKnown RBP eCLIP22.51■■□□□ 1.19
CCNC-213ENST00000523541 ARFGEF1Q9Y6D6 1849 aa22.5■■□□□ 1.19
CCNC-213ENST00000523541 SENP3-EIF4A1A0A087X0R7 540 aa22.5■■□□□ 1.19
CCNC-213ENST00000523541 NCBP3Q53F19 620 aaKnown RBP22.5■■□□□ 1.19
CCNC-213ENST00000523541 KIF6Q6ZMV9 814 aa22.5■■□□□ 1.19
CCNC-213ENST00000523541 TTLL6Q8N841 843 aa22.5■■□□□ 1.19
CCNC-213ENST00000523541 LAMB4A4D0S4 1761 aa22.5■■□□□ 1.19
CCNC-213ENST00000523541 BCORQ6W2J9 1755 aa22.49■■□□□ 1.19
CCNC-213ENST00000523541 NBPF5PQ86XG9 351 aaPredicted RBP22.49■■□□□ 1.19
CCNC-213ENST00000523541 MAP3K15Q6ZN16 1313 aa22.49■■□□□ 1.19
CCNC-213ENST00000523541 FAM177BA6PVY3 158 aa22.48■■□□□ 1.19
CCNC-213ENST00000523541 MYL6BP14649 208 aa22.48■■□□□ 1.19
CCNC-213ENST00000523541 C9orf131Q5VYM1 1079 aa22.48■■□□□ 1.19
CCNC-213ENST00000523541 NIP7Q9Y221 180 aaKnown RBP eCLIP22.48■■□□□ 1.19
CCNC-213ENST00000523541 RNF181Q9P0P0 153 aa22.47■■□□□ 1.19
CCNC-213ENST00000523541 LAS1LQ9Y4W2 734 aaKnown RBP22.47■■□□□ 1.19
CCNC-213ENST00000523541 ZNF853P0CG23 659 aa22.46■■□□□ 1.19
CCNC-213ENST00000523541 EIF2S2P20042 333 aaKnown RBP22.46■■□□□ 1.19
CCNC-213ENST00000523541 GNAI1P63096 354 aa22.46■■□□□ 1.19
CCNC-213ENST00000523541 PDIA6Q15084 440 aa22.46■■□□□ 1.19
CCNC-213ENST00000523541 HLFQ16534 295 aa22.46■■□□□ 1.19
CCNC-213ENST00000523541 CHMP4AQ9BY43 222 aa22.46■■□□□ 1.19
CCNC-213ENST00000523541 NYXQ9GZU5 481 aa22.46■■□□□ 1.19
CCNC-213ENST00000523541 IFT57Q9NWB7 429 aa22.46■■□□□ 1.19
CCNC-213ENST00000523541 ZNF219Q9P2Y4 722 aaPredicted RBP22.46■■□□□ 1.19
CCNC-213ENST00000523541 GTF2E1P29083 439 aaPredicted RBP22.45■■□□□ 1.18
CCNC-213ENST00000523541 KLRG2A4D1S0 409 aaPredicted RBP22.44■■□□□ 1.18
CCNC-213ENST00000523541 CCDC27Q2M243 656 aa22.44■■□□□ 1.18
CCNC-213ENST00000523541 STYK1Q6J9G0 422 aa22.44■■□□□ 1.18
CCNC-213ENST00000523541 LRP10Q7Z4F1 713 aa22.44■■□□□ 1.18
CCNC-213ENST00000523541 CNKSR1Q969H4 720 aa22.44■■□□□ 1.18
CCNC-213ENST00000523541 MRS2Q9HD23 443 aa22.44■■□□□ 1.18
CCNC-213ENST00000523541 DDX21Q9NR30 783 aaKnown RBP eCLIP22.44■■□□□ 1.18
CCNC-213ENST00000523541 DLEC1Q9Y238 1755 aa22.43■■□□□ 1.18
CCNC-213ENST00000523541 RASSF7Q02833 373 aa22.43■■□□□ 1.18
CCNC-213ENST00000523541 CCDC184Q52MB2 194 aa22.43■■□□□ 1.18
CCNC-213ENST00000523541 GIGYF2Q6Y7W6 1299 aaKnown RBP22.43■■□□□ 1.18
CCNC-213ENST00000523541 TTLL7Q6ZT98 887 aa22.43■■□□□ 1.18
CCNC-213ENST00000523541 MASTLQ96GX5 879 aa22.43■■□□□ 1.18
CCNC-213ENST00000523541 SRGNP10124 158 aa22.42■■□□□ 1.18
CCNC-213ENST00000523541 ANKRD31Q8N7Z5 1873 aa22.41■■□□□ 1.18
CCNC-213ENST00000523541 MBIPQ9NS73 344 aa22.41■■□□□ 1.18
CCNC-213ENST00000523541 IBTKQ9P2D0 1353 aaPredicted RBP22.4■■□□□ 1.18
CCNC-213ENST00000523541 PARP10Q53GL7 1025 aa22.4■■□□□ 1.18
CCNC-213ENST00000523541 HSP90AB3PQ58FF7 597 aa22.4■■□□□ 1.18
CCNC-213ENST00000523541 ZNF34Q8IZ26 560 aa22.4■■□□□ 1.18
CCNC-213ENST00000523541 NECTIN2Q92692 538 aa22.4■■□□□ 1.18
CCNC-213ENST00000523541 ZBTB3Q9H5J0 574 aa22.4■■□□□ 1.18
CCNC-213ENST00000523541 DBF4Q9UBU7 674 aaPredicted RBP22.4■■□□□ 1.18
CCNC-213ENST00000523541 C21orf2O43822 256 aa22.39■■□□□ 1.17
CCNC-213ENST00000523541 SOGA3Q5TF21 947 aa22.39■■□□□ 1.17
CCNC-213ENST00000523541 HDGFL1Q5TGJ6 251 aa22.39■■□□□ 1.17
CCNC-213ENST00000523541 COL11A2P13942 1736 aaPredicted RBP22.38■■□□□ 1.17
CCNC-213ENST00000523541 NPR1P16066 1061 aa22.38■■□□□ 1.17
CCNC-213ENST00000523541 LMNB1P20700 586 aa22.38■■□□□ 1.17
CCNC-213ENST00000523541 DUSP27Q5VZP5 1158 aa22.38■■□□□ 1.17
CCNC-213ENST00000523541 COPS6Q7L5N1 327 aa22.38■■□□□ 1.17
CCNC-213ENST00000523541 PPP1R42Q7Z4L9 355 aa22.38■■□□□ 1.17
CCNC-213ENST00000523541 KDM2BQ8NHM5 1336 aa22.37■■□□□ 1.17
CCNC-213ENST00000523541 ZC3H4Q9UPT8 1303 aaKnown RBP22.37■■□□□ 1.17
CCNC-213ENST00000523541 GPTP24298 496 aa22.37■■□□□ 1.17
CCNC-213ENST00000523541 ALDH1B1P30837 517 aa22.37■■□□□ 1.17
CCNC-213ENST00000523541 C16orf71Q8IYS4 520 aaPredicted RBP22.37■■□□□ 1.17
CCNC-213ENST00000523541 HYPKQ9NX55 129 aa22.37■■□□□ 1.17
CCNC-213ENST00000523541 RNF123Q5XPI4 1314 aa22.36■■□□□ 1.17
CCNC-213ENST00000523541 KRT24Q2M2I5 525 aa22.36■■□□□ 1.17
CCNC-213ENST00000523541 PROSER3Q2NL68 480 aa22.36■■□□□ 1.17
CCNC-213ENST00000523541 IL16Q14005 1332 aa22.35■■□□□ 1.17
CCNC-213ENST00000523541 PRPF40BQ6NWY9 871 aaKnown RBP22.35■■□□□ 1.17
CCNC-213ENST00000523541 WWC1Q8IX03 1113 aa22.35■■□□□ 1.17
CCNC-213ENST00000523541 XAGE3Q8WTP9 111 aa22.35■■□□□ 1.17
CCNC-213ENST00000523541 NMRK2Q9NPI5 230 aa22.35■■□□□ 1.17
CCNC-213ENST00000523541 CACNA1SQ13698 1873 aa22.34■■□□□ 1.17
CCNC-213ENST00000523541 KIF3CO14782 793 aa22.34■■□□□ 1.17
CCNC-213ENST00000523541 ANXA1P04083 346 aa22.34■■□□□ 1.17
CCNC-213ENST00000523541 CHPF2Q9P2E5 772 aa22.34■■□□□ 1.17
CCNC-213ENST00000523541 RIC1Q4ADV7 1423 aa22.33■■□□□ 1.17
CCNC-213ENST00000523541 AIMP1Q12904 312 aaKnown RBP22.33■■□□□ 1.17
CCNC-213ENST00000523541 TCIRG1Q13488 830 aa22.33■■□□□ 1.17
CCNC-213ENST00000523541 CRY2Q49AN0 593 aa22.33■■□□□ 1.17
CCNC-213ENST00000523541 SUSD4Q5VX71 490 aa22.33■■□□□ 1.17
CCNC-213ENST00000523541 NUTM1Q86Y26 1132 aa22.33■■□□□ 1.17
CCNC-213ENST00000523541 UBN2Q6ZU65 1347 aa22.32■■□□□ 1.16
CCNC-213ENST00000523541 NFKBIEO00221 500 aa22.32■■□□□ 1.16
CCNC-213ENST00000523541 SLC10A5Q5PT55 438 aa22.32■■□□□ 1.16
CCNC-213ENST00000523541 ANKRD13DQ6ZTN6 518 aa22.32■■□□□ 1.16
CCNC-213ENST00000523541 PLBD2Q8NHP8 589 aa22.32■■□□□ 1.16
CCNC-213ENST00000523541 SBF1O95248 1867 aa22.32■■□□□ 1.16
CCNC-213ENST00000523541 LTBP3Q9NS15 1303 aa22.31■■□□□ 1.16
CCNC-213ENST00000523541 NUP98P52948 1817 aa22.31■■□□□ 1.16
CCNC-213ENST00000523541 NTSR2O95665 410 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms