RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 NUP98P52948 1817 aa13.69□□□□□ -0.22
DENND3-220ENST00000523066 A0A087WZG4 1122 aa13.69□□□□□ -0.22
DENND3-220ENST00000523066 POLRMTO00411 1230 aaKnown RBP13.69□□□□□ -0.22
DENND3-220ENST00000523066 PROSER3Q2NL68 480 aa13.69□□□□□ -0.22
DENND3-220ENST00000523066 TSR2Q969E8 191 aaKnown RBP13.69□□□□□ -0.22
DENND3-220ENST00000523066 IFT57Q9NWB7 429 aa13.69□□□□□ -0.22
DENND3-220ENST00000523066 PARP3Q9Y6F1 533 aa13.69□□□□□ -0.22
DENND3-220ENST00000523066 NRXN2Q9P2S2 1712 aa13.68□□□□□ -0.22
DENND3-220ENST00000523066 ELL2O00472 640 aaPredicted RBP13.68□□□□□ -0.22
DENND3-220ENST00000523066 GNAI1P63096 354 aa13.68□□□□□ -0.22
DENND3-220ENST00000523066 PDIA6Q15084 440 aa13.68□□□□□ -0.22
DENND3-220ENST00000523066 CCDC27Q2M243 656 aa13.68□□□□□ -0.22
DENND3-220ENST00000523066 TTLL7Q6ZT98 887 aa13.68□□□□□ -0.22
DENND3-220ENST00000523066 CCER2I3L3R5 266 aa13.67□□□□□ -0.22
DENND3-220ENST00000523066 HLFQ16534 295 aa13.67□□□□□ -0.22
DENND3-220ENST00000523066 DUSP27Q5VZP5 1158 aa13.67□□□□□ -0.22
DENND3-220ENST00000523066 LRP10Q7Z4F1 713 aa13.67□□□□□ -0.22
DENND3-220ENST00000523066 NPM2Q86SE8 214 aaKnown RBP13.67□□□□□ -0.22
DENND3-220ENST00000523066 C10orf71Q711Q0 1435 aa13.66□□□□□ -0.22
DENND3-220ENST00000523066 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
DENND3-220ENST00000523066 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
DENND3-220ENST00000523066 CCDC24Q8N4L8 307 aa13.66□□□□□ -0.22
DENND3-220ENST00000523066 TSPYL6Q8N831 410 aa13.66□□□□□ -0.22
DENND3-220ENST00000523066 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
DENND3-220ENST00000523066 CD2APQ9Y5K6 639 aa13.66□□□□□ -0.22
DENND3-220ENST00000523066 ANKRD31Q8N7Z5 1873 aa13.65□□□□□ -0.22
DENND3-220ENST00000523066 SERPINB2P05120 415 aa13.65□□□□□ -0.22
DENND3-220ENST00000523066 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
DENND3-220ENST00000523066 CHPF2Q9P2E5 772 aa13.65□□□□□ -0.22
DENND3-220ENST00000523066 ZBTB12Q9Y330 459 aaPredicted RBP13.65□□□□□ -0.22
DENND3-220ENST00000523066 CARMIL3Q8ND23 1372 aa13.65□□□□□ -0.22
DENND3-220ENST00000523066 BRCA1P38398 1863 aaKnown RBP13.64□□□□□ -0.23
DENND3-220ENST00000523066 PXDNLA1KZ92 1463 aa13.64□□□□□ -0.23
DENND3-220ENST00000523066 YBX3P16989 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
DENND3-220ENST00000523066 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
DENND3-220ENST00000523066 ERBB4Q15303 1308 aa13.64□□□□□ -0.23
DENND3-220ENST00000523066 A0A0G2JLW4 131 aa13.63□□□□□ -0.23
DENND3-220ENST00000523066 AIMP1Q12904 312 aaKnown RBP13.63□□□□□ -0.23
DENND3-220ENST00000523066 RTN4Q9NQC3 1192 aaKnown RBP13.63□□□□□ -0.23
DENND3-220ENST00000523066 MAP3K15Q6ZN16 1313 aa13.63□□□□□ -0.23
DENND3-220ENST00000523066 FAM177BA6PVY3 158 aa13.62□□□□□ -0.23
DENND3-220ENST00000523066 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
DENND3-220ENST00000523066 DPEP1P16444 411 aa13.62□□□□□ -0.23
DENND3-220ENST00000523066 GPR162Q16538 588 aa13.62□□□□□ -0.23
DENND3-220ENST00000523066 COPS6Q7L5N1 327 aa13.62□□□□□ -0.23
DENND3-220ENST00000523066 WDR63Q8IWG1 891 aa13.62□□□□□ -0.23
DENND3-220ENST00000523066 XAGE3Q8WTP9 111 aa13.62□□□□□ -0.23
DENND3-220ENST00000523066 DDX21Q9NR30 783 aaKnown RBP eCLIP13.62□□□□□ -0.23
DENND3-220ENST00000523066 IL16Q14005 1332 aa13.62□□□□□ -0.23
DENND3-220ENST00000523066 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
DENND3-220ENST00000523066 HOXB7P09629 217 aa13.61□□□□□ -0.23
DENND3-220ENST00000523066 GPTP24298 496 aa13.61□□□□□ -0.23
DENND3-220ENST00000523066 CHRNA5P30532 468 aa13.61□□□□□ -0.23
DENND3-220ENST00000523066 DSG3P32926 999 aa13.61□□□□□ -0.23
DENND3-220ENST00000523066 PRR5LQ6MZQ0 368 aa13.61□□□□□ -0.23
DENND3-220ENST00000523066 KIF6Q6ZMV9 814 aa13.61□□□□□ -0.23
DENND3-220ENST00000523066 SETDB2Q96T68 719 aa13.61□□□□□ -0.23
DENND3-220ENST00000523066 NIP7Q9Y221 180 aaKnown RBP eCLIP13.61□□□□□ -0.23
DENND3-220ENST00000523066 COL11A2P13942 1736 aaPredicted RBP13.61□□□□□ -0.23
DENND3-220ENST00000523066 ZNF521Q96K83 1311 aa13.61□□□□□ -0.23
DENND3-220ENST00000523066 ANKRD36CQ5JPF3 1778 aa13.6□□□□□ -0.23
DENND3-220ENST00000523066 KCNA3P22001 575 aa13.6□□□□□ -0.23
DENND3-220ENST00000523066 CACNA1SQ13698 1873 aa13.6□□□□□ -0.23
DENND3-220ENST00000523066 CLEC4GQ6UXB4 293 aa13.6□□□□□ -0.23
DENND3-220ENST00000523066 ZNF428Q96B54 188 aa13.6□□□□□ -0.23
DENND3-220ENST00000523066 PHAXQ9H814 394 aaKnown RBP13.6□□□□□ -0.23
DENND3-220ENST00000523066 ZNF652Q9Y2D9 606 aa13.6□□□□□ -0.23
DENND3-220ENST00000523066 DLEC1Q9Y238 1755 aa13.6□□□□□ -0.23
DENND3-220ENST00000523066 ARFGEF2Q9Y6D5 1785 aa13.59□□□□□ -0.23
DENND3-220ENST00000523066 ERVV-1B6SEH8 477 aa13.59□□□□□ -0.23
DENND3-220ENST00000523066 TGFB2P61812 414 aa13.59□□□□□ -0.23
DENND3-220ENST00000523066 EXOSC9Q06265 439 aaKnown RBP13.59□□□□□ -0.23
DENND3-220ENST00000523066 UBN2Q6ZU65 1347 aa13.59□□□□□ -0.23
DENND3-220ENST00000523066 CHD4Q14839 1912 aa13.58□□□□□ -0.23
DENND3-220ENST00000523066 TWISTNBQ3B726 338 aaPredicted RBP13.58□□□□□ -0.24
DENND3-220ENST00000523066 GIGYF2Q6Y7W6 1299 aaKnown RBP13.58□□□□□ -0.24
DENND3-220ENST00000523066 DBF4Q9UBU7 674 aaPredicted RBP13.58□□□□□ -0.24
DENND3-220ENST00000523066 TNRC6CQ9HCJ0 1690 aaKnown RBP13.57□□□□□ -0.24
DENND3-220ENST00000523066 NBPF5PQ86XG9 351 aaPredicted RBP13.57□□□□□ -0.24
DENND3-220ENST00000523066 NUTM1Q86Y26 1132 aa13.57□□□□□ -0.24
DENND3-220ENST00000523066 CNBD1Q8NA66 436 aa13.57□□□□□ -0.24
DENND3-220ENST00000523066 ATP10DQ9P241 1426 aa13.56□□□□□ -0.24
DENND3-220ENST00000523066 ARFGEF1Q9Y6D6 1849 aa13.56□□□□□ -0.24
DENND3-220ENST00000523066 NPHP1O15259 732 aa13.56□□□□□ -0.24
DENND3-220ENST00000523066 SUSD4Q5VX71 490 aa13.56□□□□□ -0.24
DENND3-220ENST00000523066 ZNF34Q8IZ26 560 aa13.56□□□□□ -0.24
DENND3-220ENST00000523066 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
DENND3-220ENST00000523066 HYPKQ9NX55 129 aa13.56□□□□□ -0.24
DENND3-220ENST00000523066 BCS1LQ9Y276 419 aa13.56□□□□□ -0.24
DENND3-220ENST00000523066 RGL2O15211 777 aa13.55□□□□□ -0.24
DENND3-220ENST00000523066 VAMP4O75379 141 aa13.55□□□□□ -0.24
DENND3-220ENST00000523066 GOLGA2Q08379 1002 aa13.55□□□□□ -0.24
DENND3-220ENST00000523066 CCDC30Q5VVM6 783 aa13.55□□□□□ -0.24
DENND3-220ENST00000523066 G2E3Q7L622 706 aa13.55□□□□□ -0.24
DENND3-220ENST00000523066 C2CD5Q86YS7 1000 aa13.55□□□□□ -0.24
DENND3-220ENST00000523066 ABCC12Q96J65 1359 aa13.55□□□□□ -0.24
DENND3-220ENST00000523066 ST5P78524 1137 aa13.54□□□□□ -0.24
DENND3-220ENST00000523066 ERFEQ4G0M1 354 aa13.54□□□□□ -0.24
DENND3-220ENST00000523066 ANKRD13DQ6ZTN6 518 aa13.54□□□□□ -0.24
DENND3-220ENST00000523066 PLBD2Q8NHP8 589 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms