RNA–Protein interactions for RNA: ENST00000522411.5

LSS-211, Transcript of lanosterol synthase, humanhuman

TSL 2 BASIC

Gene LSS, Length 2,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-211ENST00000522411 CASTP20810 708 aaKnown RBP17.24■□□□□ 0.35
LSS-211ENST00000522411 UVSSAQ2YD98 709 aa17.24■□□□□ 0.35
LSS-211ENST00000522411 FAM184AQ8NB25 1140 aa17.24■□□□□ 0.35
LSS-211ENST00000522411 ARID3AQ99856 593 aa17.24■□□□□ 0.35
LSS-211ENST00000522411 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
LSS-211ENST00000522411 LRRC37A3O60309 1634 aa17.24■□□□□ 0.35
LSS-211ENST00000522411 DNTTIP2Q5QJE6 756 aaKnown RBP17.23■□□□□ 0.35
LSS-211ENST00000522411 MARF1Q9Y4F3 1742 aaKnown RBP17.23■□□□□ 0.35
LSS-211ENST00000522411 DYNC1I1O14576 645 aa17.23■□□□□ 0.35
LSS-211ENST00000522411 F13A1P00488 732 aa17.23■□□□□ 0.35
LSS-211ENST00000522411 ANXA1P04083 346 aa17.23■□□□□ 0.35
LSS-211ENST00000522411 DDX17Q92841 729 aaKnown RBP17.23■□□□□ 0.35
LSS-211ENST00000522411 TTC12Q9H892 705 aaPredicted RBP17.23■□□□□ 0.35
LSS-211ENST00000522411 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.23■□□□□ 0.35
LSS-211ENST00000522411 PI4KAP2A4QPH2 592 aa17.22■□□□□ 0.35
LSS-211ENST00000522411 UBE2HP62256 183 aa17.22■□□□□ 0.35
LSS-211ENST00000522411 C17orf53Q8N3J3 647 aaPredicted RBP17.22■□□□□ 0.35
LSS-211ENST00000522411 PI4KAP1Q8N8J0 262 aa17.22■□□□□ 0.35
LSS-211ENST00000522411 DDX54Q8TDD1 881 aaKnown RBP17.22■□□□□ 0.35
LSS-211ENST00000522411 PXDNLA1KZ92 1463 aa17.22■□□□□ 0.35
LSS-211ENST00000522411 PTH1RQ03431 593 aa17.22■□□□□ 0.35
LSS-211ENST00000522411 CCDC83Q8IWF9 413 aa17.22■□□□□ 0.35
LSS-211ENST00000522411 JARID2Q92833 1246 aaPredicted RBP17.22■□□□□ 0.35
LSS-211ENST00000522411 CHPF2Q9P2E5 772 aa17.22■□□□□ 0.35
LSS-211ENST00000522411 ADCK5Q3MIX3 580 aa17.21■□□□□ 0.35
LSS-211ENST00000522411 BEND3Q5T5X7 828 aa17.21■□□□□ 0.35
LSS-211ENST00000522411 GIMAP6Q6P9H5 292 aa17.21■□□□□ 0.35
LSS-211ENST00000522411 C19orf44Q9H6X5 657 aa17.21■□□□□ 0.35
LSS-211ENST00000522411 HYPKQ9NX55 129 aa17.21■□□□□ 0.35
LSS-211ENST00000522411 ADGRL3Q9HAR2 1447 aa17.21■□□□□ 0.35
LSS-211ENST00000522411 PLCB2Q00722 1185 aa17.21■□□□□ 0.35
LSS-211ENST00000522411 OS9Q13438 667 aaPredicted RBP17.21■□□□□ 0.35
LSS-211ENST00000522411 LGR6Q9HBX8 967 aa17.21■□□□□ 0.35
LSS-211ENST00000522411 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
LSS-211ENST00000522411 CACNA1FO60840 1977 aa17.21■□□□□ 0.35
LSS-211ENST00000522411 NWD1Q149M9 1564 aa17.21■□□□□ 0.34
LSS-211ENST00000522411 KCNQ3O43525 872 aa17.2■□□□□ 0.34
LSS-211ENST00000522411 GJB2P29033 226 aa17.2■□□□□ 0.34
LSS-211ENST00000522411 DNM1Q05193 864 aaKnown RBP17.2■□□□□ 0.34
LSS-211ENST00000522411 MAP7D2Q96T17 732 aa17.2■□□□□ 0.34
LSS-211ENST00000522411 PRPF40BQ6NWY9 871 aaKnown RBP17.2■□□□□ 0.34
LSS-211ENST00000522411 DNAAF4Q8WXU2 420 aa17.2■□□□□ 0.34
LSS-211ENST00000522411 DIAPH3Q9NSV4 1193 aa17.2■□□□□ 0.34
LSS-211ENST00000522411 PHF8Q9UPP1 1060 aa17.2■□□□□ 0.34
LSS-211ENST00000522411 LETM1O95202 739 aaPredicted RBP17.19■□□□□ 0.34
LSS-211ENST00000522411 NOLC1Q14978 699 aaKnown RBP eCLIP17.19■□□□□ 0.348e-11■□□□□ 10.1
LSS-211ENST00000522411 JAKMIP1Q96N16 626 aaKnown RBP17.19■□□□□ 0.34
LSS-211ENST00000522411 EIF4A1P60842 406 aaKnown RBP17.19■□□□□ 0.34
LSS-211ENST00000522411 ABTB2Q8N961 1025 aa17.19■□□□□ 0.34
LSS-211ENST00000522411 PIBF1Q8WXW3 757 aa17.19■□□□□ 0.34
LSS-211ENST00000522411 PDRG1Q9NUG6 133 aa17.19■□□□□ 0.34
LSS-211ENST00000522411 KDM4AO75164 1064 aa17.18■□□□□ 0.34
LSS-211ENST00000522411 ATF3P18847 181 aa17.18■□□□□ 0.34
LSS-211ENST00000522411 MTMR6Q9Y217 621 aa17.18■□□□□ 0.34
LSS-211ENST00000522411 GLRX3O76003 335 aaKnown RBP17.18■□□□□ 0.34
LSS-211ENST00000522411 TSC1Q92574 1164 aa17.18■□□□□ 0.34
LSS-211ENST00000522411 ATP6V1DQ9Y5K8 247 aa17.18■□□□□ 0.34
LSS-211ENST00000522411 AP5Z1O43299 807 aa17.17■□□□□ 0.34
LSS-211ENST00000522411 NECAB1Q8N987 351 aa17.17■□□□□ 0.34
LSS-211ENST00000522411 FUCA2Q9BTY2 467 aa17.17■□□□□ 0.34
LSS-211ENST00000522411 PA2G4Q9UQ80 394 aaKnown RBP17.17■□□□□ 0.34
LSS-211ENST00000522411 VPS37CA5D8V6 355 aaPredicted RBP17.16■□□□□ 0.34
LSS-211ENST00000522411 ST3GAL1Q11201 340 aa17.16■□□□□ 0.34
LSS-211ENST00000522411 HSP90AB4PQ58FF6 505 aa17.16■□□□□ 0.34
LSS-211ENST00000522411 TTC41PQ6P2S7 1318 aa17.16■□□□□ 0.34
LSS-211ENST00000522411 PSME1Q06323 249 aa17.16■□□□□ 0.34
LSS-211ENST00000522411 VPS53Q5VIR6 699 aa17.16■□□□□ 0.34
LSS-211ENST00000522411 CLASRPQ8N2M8 674 aaKnown RBP17.16■□□□□ 0.34
LSS-211ENST00000522411 MYRIPQ8NFW9 859 aa17.16■□□□□ 0.34
LSS-211ENST00000522411 N4BP2Q86UW6 1770 aaPredicted RBP17.16■□□□□ 0.34
LSS-211ENST00000522411 ME3Q16798 604 aa17.15■□□□□ 0.34
LSS-211ENST00000522411 RUFY2Q8WXA3 655 aa17.15■□□□□ 0.34
LSS-211ENST00000522411 ZSWIM6Q9HCJ5 1215 aa17.15■□□□□ 0.34
LSS-211ENST00000522411 CYP46A1Q9Y6A2 500 aa17.15■□□□□ 0.34
LSS-211ENST00000522411 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
LSS-211ENST00000522411 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
LSS-211ENST00000522411 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.33
LSS-211ENST00000522411 ECHDC1Q9NTX5 307 aa17.14■□□□□ 0.33
LSS-211ENST00000522411 CHMP3Q9Y3E7 222 aa17.14■□□□□ 0.33
LSS-211ENST00000522411 USP54Q70EL1 1684 aa17.14■□□□□ 0.33
LSS-211ENST00000522411 ANKARQ7Z5J8 1434 aa17.14■□□□□ 0.33
LSS-211ENST00000522411 NBPF6Q5VWK0 638 aa17.14■□□□□ 0.33
LSS-211ENST00000522411 NBPF4Q96M43 638 aa17.14■□□□□ 0.33
LSS-211ENST00000522411 ADCY9O60503 1353 aa17.14■□□□□ 0.33
LSS-211ENST00000522411 CEMIPQ8WUJ3 1361 aa17.14■□□□□ 0.33
LSS-211ENST00000522411 NECTIN1Q15223 517 aa17.13■□□□□ 0.33
LSS-211ENST00000522411 FAM177BA6PVY3 158 aa17.13■□□□□ 0.33
LSS-211ENST00000522411 IFIT2P09913 472 aaKnown RBP17.13■□□□□ 0.33
LSS-211ENST00000522411 FAM173BQ6P4H8 233 aa17.13■□□□□ 0.33
LSS-211ENST00000522411 ZSCAN31Q96LW9 406 aaPredicted RBP17.13■□□□□ 0.33
LSS-211ENST00000522411 C9orf78Q9NZ63 289 aaPredicted RBP17.13■□□□□ 0.33
LSS-211ENST00000522411 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
LSS-211ENST00000522411 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.13■□□□□ 0.33
LSS-211ENST00000522411 LTN1O94822 1766 aa17.12■□□□□ 0.33
LSS-211ENST00000522411 MTERF4Q7Z6M4 381 aaKnown RBP17.12■□□□□ 0.33
LSS-211ENST00000522411 FERMT3Q86UX7 667 aa17.12■□□□□ 0.33
LSS-211ENST00000522411 SPC24Q8NBT2 197 aa17.12■□□□□ 0.33
LSS-211ENST00000522411 FAM227BQ96M60 508 aa17.12■□□□□ 0.33
LSS-211ENST00000522411 BTBD11A6QL63 1104 aa17.12■□□□□ 0.33
LSS-211ENST00000522411 MPRIPQ6WCQ1 1025 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms