RNA–Protein interactions for RNA: ENST00000521078.1

RUNX1T1-231, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 2

Gene RUNX1T1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-231ENST00000521078 RIOK3O14730 519 aaKnown RBP16.5■□□□□ 0.23
RUNX1T1-231ENST00000521078 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
RUNX1T1-231ENST00000521078 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
RUNX1T1-231ENST00000521078 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
RUNX1T1-231ENST00000521078 PARP3Q9Y6F1 533 aa16.5■□□□□ 0.23
RUNX1T1-231ENST00000521078 KIF13BQ9NQT8 1826 aa16.49■□□□□ 0.23
RUNX1T1-231ENST00000521078 GIGYF1O75420 1035 aaPredicted RBP16.49■□□□□ 0.23
RUNX1T1-231ENST00000521078 SCN7AQ01118 1682 aa16.47■□□□□ 0.23
RUNX1T1-231ENST00000521078 TM4SF1P30408 202 aa16.47■□□□□ 0.23
RUNX1T1-231ENST00000521078 PIP4K2AP48426 406 aaPredicted RBP16.47■□□□□ 0.23
RUNX1T1-231ENST00000521078 BCL2L12Q9HB09 334 aa16.47■□□□□ 0.23
RUNX1T1-231ENST00000521078 TBC1D2BQ9UPU7 963 aa16.47■□□□□ 0.23
RUNX1T1-231ENST00000521078 AFDNP55196 1824 aaKnown RBP16.47■□□□□ 0.23
RUNX1T1-231ENST00000521078 DDR1Q08345 913 aa16.46■□□□□ 0.23
RUNX1T1-231ENST00000521078 GPR162Q16538 588 aa16.46■□□□□ 0.23
RUNX1T1-231ENST00000521078 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
RUNX1T1-231ENST00000521078 TSHZ2Q9NRE2 1034 aa16.46■□□□□ 0.23
RUNX1T1-231ENST00000521078 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
RUNX1T1-231ENST00000521078 BCORQ6W2J9 1755 aa16.46■□□□□ 0.22
RUNX1T1-231ENST00000521078 GOLGB1Q14789 3259 aaKnown RBP16.46■□□□□ 0.22
RUNX1T1-231ENST00000521078 NBPF26B4DH59 902 aa16.45■□□□□ 0.22
RUNX1T1-231ENST00000521078 CHL1O00533 1208 aa16.45■□□□□ 0.22
RUNX1T1-231ENST00000521078 NFIXQ14938 502 aa16.45■□□□□ 0.22
RUNX1T1-231ENST00000521078 NBPF10Q6P3W6 841 aaKnown RBP16.45■□□□□ 0.22
RUNX1T1-231ENST00000521078 PELP1Q8IZL8 1130 aaKnown RBP16.45■□□□□ 0.22
RUNX1T1-231ENST00000521078 NBPF15Q8N660 670 aa16.45■□□□□ 0.22
RUNX1T1-231ENST00000521078 CHD4Q14839 1912 aa16.45■□□□□ 0.22
RUNX1T1-231ENST00000521078 C10orf71Q711Q0 1435 aa16.45■□□□□ 0.22
RUNX1T1-231ENST00000521078 UTRNP46939 3433 aa16.44■□□□□ 0.22
RUNX1T1-231ENST00000521078 N4BP2Q86UW6 1770 aaPredicted RBP16.44■□□□□ 0.22
RUNX1T1-231ENST00000521078 POLRMTO00411 1230 aaKnown RBP16.44■□□□□ 0.22
RUNX1T1-231ENST00000521078 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
RUNX1T1-231ENST00000521078 KIAA1551Q9HCM1 1747 aa16.43■□□□□ 0.22
RUNX1T1-231ENST00000521078 CAMTA2O94983 1202 aa16.43■□□□□ 0.22
RUNX1T1-231ENST00000521078 NRXN2Q9P2S2 1712 aa16.42■□□□□ 0.22
RUNX1T1-231ENST00000521078 CHRM1P11229 460 aaPredicted RBP16.42■□□□□ 0.22
RUNX1T1-231ENST00000521078 TGFB2P61812 414 aa16.42■□□□□ 0.22
RUNX1T1-231ENST00000521078 CALD1Q05682 793 aaKnown RBP16.42■□□□□ 0.22
RUNX1T1-231ENST00000521078 BICDL1Q6ZP65 573 aa16.42■□□□□ 0.22
RUNX1T1-231ENST00000521078 SERPINB2P05120 415 aa16.41■□□□□ 0.22
RUNX1T1-231ENST00000521078 TBC1D9BQ66K14 1250 aa16.41■□□□□ 0.22
RUNX1T1-231ENST00000521078 PXDNLA1KZ92 1463 aa16.41■□□□□ 0.22
RUNX1T1-231ENST00000521078 YBX3P16989 372 aaKnown RBP eCLIP16.4■□□□□ 0.22
RUNX1T1-231ENST00000521078 EIF2S2P20042 333 aaKnown RBP16.4■□□□□ 0.22
RUNX1T1-231ENST00000521078 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
RUNX1T1-231ENST00000521078 ERBB4Q15303 1308 aa16.4■□□□□ 0.22
RUNX1T1-231ENST00000521078 BRCA1P38398 1863 aaKnown RBP16.39■□□□□ 0.22
RUNX1T1-231ENST00000521078 SENP3-EIF4A1A0A087X0R7 540 aa16.39■□□□□ 0.21
RUNX1T1-231ENST00000521078 ZNF853P0CG23 659 aa16.39■□□□□ 0.21
RUNX1T1-231ENST00000521078 MYL6BP14649 208 aa16.39■□□□□ 0.21
RUNX1T1-231ENST00000521078 GNAI1P63096 354 aa16.39■□□□□ 0.21
RUNX1T1-231ENST00000521078 CLEC4GQ6UXB4 293 aa16.39■□□□□ 0.21
RUNX1T1-231ENST00000521078 NGEFQ8N5V2 710 aa16.39■□□□□ 0.21
RUNX1T1-231ENST00000521078 MBIPQ9NS73 344 aa16.39■□□□□ 0.21
RUNX1T1-231ENST00000521078 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
RUNX1T1-231ENST00000521078 NUP98P52948 1817 aa16.39■□□□□ 0.21
RUNX1T1-231ENST00000521078 A0A0G2JLW4 131 aa16.38■□□□□ 0.21
RUNX1T1-231ENST00000521078 GRIN3BO60391 1043 aa16.38■□□□□ 0.21
RUNX1T1-231ENST00000521078 DPEP1P16444 411 aa16.38■□□□□ 0.21
RUNX1T1-231ENST00000521078 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
RUNX1T1-231ENST00000521078 KRT24Q2M2I5 525 aa16.38■□□□□ 0.21
RUNX1T1-231ENST00000521078 FAM9BQ8IZU0 186 aa16.38■□□□□ 0.21
RUNX1T1-231ENST00000521078 SETDB2Q96T68 719 aa16.38■□□□□ 0.21
RUNX1T1-231ENST00000521078 WWC3Q9ULE0 1092 aa16.38■□□□□ 0.21
RUNX1T1-231ENST00000521078 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
RUNX1T1-231ENST00000521078 HOXB7P09629 217 aa16.36■□□□□ 0.21
RUNX1T1-231ENST00000521078 YY1P25490 414 aa16.36■□□□□ 0.21
RUNX1T1-231ENST00000521078 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
RUNX1T1-231ENST00000521078 TTLL7Q6ZT98 887 aa16.36■□□□□ 0.21
RUNX1T1-231ENST00000521078 WWC1Q8IX03 1113 aa16.36■□□□□ 0.21
RUNX1T1-231ENST00000521078 NECTIN2Q92692 538 aa16.36■□□□□ 0.21
RUNX1T1-231ENST00000521078 ERVV-1B6SEH8 477 aa16.35■□□□□ 0.21
RUNX1T1-231ENST00000521078 PDIA6Q15084 440 aa16.35■□□□□ 0.21
RUNX1T1-231ENST00000521078 HLFQ16534 295 aa16.35■□□□□ 0.21
RUNX1T1-231ENST00000521078 MAP3K15Q6ZN16 1313 aa16.35■□□□□ 0.21
RUNX1T1-231ENST00000521078 ANKRD31Q8N7Z5 1873 aa16.35■□□□□ 0.21
RUNX1T1-231ENST00000521078 STK25O00506 426 aa16.34■□□□□ 0.21
RUNX1T1-231ENST00000521078 ANXA1P04083 346 aa16.34■□□□□ 0.21
RUNX1T1-231ENST00000521078 KCNA3P22001 575 aa16.34■□□□□ 0.21
RUNX1T1-231ENST00000521078 PROSER3Q2NL68 480 aa16.34■□□□□ 0.21
RUNX1T1-231ENST00000521078 DUSP27Q5VZP5 1158 aa16.34■□□□□ 0.21
RUNX1T1-231ENST00000521078 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
RUNX1T1-231ENST00000521078 ARFGEF1Q9Y6D6 1849 aa16.33■□□□□ 0.21
RUNX1T1-231ENST00000521078 NPHP1O15259 732 aa16.33■□□□□ 0.2
RUNX1T1-231ENST00000521078 CHRNA5P30532 468 aa16.33■□□□□ 0.2
RUNX1T1-231ENST00000521078 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.2
RUNX1T1-231ENST00000521078 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.2
RUNX1T1-231ENST00000521078 CNBD1Q8NA66 436 aa16.33■□□□□ 0.2
RUNX1T1-231ENST00000521078 DDX21Q9NR30 783 aaKnown RBP eCLIP16.33■□□□□ 0.2
RUNX1T1-231ENST00000521078 PIM2Q9P1W9 311 aa16.33■□□□□ 0.2
RUNX1T1-231ENST00000521078 NIP7Q9Y221 180 aaKnown RBP eCLIP16.33■□□□□ 0.2
RUNX1T1-231ENST00000521078 BCS1LQ9Y276 419 aa16.33■□□□□ 0.2
RUNX1T1-231ENST00000521078 SALL2Q9Y467 1007 aaPredicted RBP16.33■□□□□ 0.2
RUNX1T1-231ENST00000521078 DLEC1Q9Y238 1755 aa16.33■□□□□ 0.2
RUNX1T1-231ENST00000521078 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
RUNX1T1-231ENST00000521078 ZBTB3Q9H5J0 574 aa16.32■□□□□ 0.2
RUNX1T1-231ENST00000521078 IL16Q14005 1332 aa16.31■□□□□ 0.2
RUNX1T1-231ENST00000521078 ST5P78524 1137 aa16.31■□□□□ 0.2
RUNX1T1-231ENST00000521078 CCDC24Q8N4L8 307 aa16.31■□□□□ 0.2
RUNX1T1-231ENST00000521078 BRIP1Q9BX63 1249 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms