RNA–Protein interactions for RNA: ENST00000520724.5

RUNX1T1-227, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 2 BASIC

Gene RUNX1T1, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-227ENST00000520724 CHMP4CQ96CF2 233 aa14□□□□□ -0.17
RUNX1T1-227ENST00000520724 KIF24Q5T7B8 1368 aa13.99□□□□□ -0.17
RUNX1T1-227ENST00000520724 SATB1Q01826 763 aa13.99□□□□□ -0.17
RUNX1T1-227ENST00000520724 TIGD1Q96MW7 591 aa13.99□□□□□ -0.17
RUNX1T1-227ENST00000520724 TOGARAM1Q9Y4F4 1720 aa13.99□□□□□ -0.17
RUNX1T1-227ENST00000520724 ADCY9O60503 1353 aa13.99□□□□□ -0.17
RUNX1T1-227ENST00000520724 ZNF500O60304 480 aaPredicted RBP13.99□□□□□ -0.17
RUNX1T1-227ENST00000520724 IFFO2Q5TF58 517 aa13.99□□□□□ -0.17
RUNX1T1-227ENST00000520724 C4BP0C0L5 1744 aa13.98□□□□□ -0.17
RUNX1T1-227ENST00000520724 TTC36A6NLP5 189 aa13.98□□□□□ -0.17
RUNX1T1-227ENST00000520724 CSPP1Q1MSJ5 1256 aa13.98□□□□□ -0.17
RUNX1T1-227ENST00000520724 HS1BP3Q53T59 392 aa13.98□□□□□ -0.17
RUNX1T1-227ENST00000520724 SPG7Q9UQ90 795 aa13.98□□□□□ -0.17
RUNX1T1-227ENST00000520724 KIF3AQ9Y496 699 aa13.98□□□□□ -0.17
RUNX1T1-227ENST00000520724 TAF1LQ8IZX4 1826 aa13.98□□□□□ -0.17
RUNX1T1-227ENST00000520724 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
RUNX1T1-227ENST00000520724 LOC102724159A0A0B4J2E5 919 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 SSFA2P28290 1259 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 CBX1P83916 185 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 PWP2Q15269 919 aaKnown RBP13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 SASS6Q6UVJ0 657 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 PPP1R9BQ96SB3 815 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 ATG3Q9NT62 314 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 POLKQ9UBT6 870 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 NCAPD2Q15021 1401 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 IRF6O14896 467 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 GNPATO15228 680 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 ATP6V1AP38606 617 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 TMOD3Q9NYL9 352 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 RAI14Q9P0K7 980 aa13.97□□□□□ -0.17
RUNX1T1-227ENST00000520724 PHKG2P15735 406 aa13.96□□□□□ -0.17
RUNX1T1-227ENST00000520724 HMGB2P26583 209 aaKnown RBP13.96□□□□□ -0.17
RUNX1T1-227ENST00000520724 CDCA8Q53HL2 280 aa13.96□□□□□ -0.17
RUNX1T1-227ENST00000520724 SLC4A9Q96Q91 983 aa13.96□□□□□ -0.17
RUNX1T1-227ENST00000520724 PRDM16Q9HAZ2 1276 aa13.96□□□□□ -0.17
RUNX1T1-227ENST00000520724 TRIM6-TRIM34B2RNG4 842 aa13.96□□□□□ -0.18
RUNX1T1-227ENST00000520724 MSNP26038 577 aaKnown RBP13.96□□□□□ -0.18
RUNX1T1-227ENST00000520724 CCDC173Q0VFZ6 552 aa13.96□□□□□ -0.18
RUNX1T1-227ENST00000520724 MYCBPQ99417 103 aaPredicted RBP13.96□□□□□ -0.18
RUNX1T1-227ENST00000520724 TRIM34Q9BYJ4 488 aa13.96□□□□□ -0.18
RUNX1T1-227ENST00000520724 CEP83Q9Y592 693 aa13.96□□□□□ -0.18
RUNX1T1-227ENST00000520724 ITGB4P16144 1822 aa13.95□□□□□ -0.18
RUNX1T1-227ENST00000520724 MMP10P09238 476 aa13.95□□□□□ -0.18
RUNX1T1-227ENST00000520724 HSPA6P17066 643 aa13.95□□□□□ -0.18
RUNX1T1-227ENST00000520724 BECN1Q14457 450 aa13.95□□□□□ -0.18
RUNX1T1-227ENST00000520724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.95□□□□□ -0.18
RUNX1T1-227ENST00000520724 KIF3CO14782 793 aa13.94□□□□□ -0.18
RUNX1T1-227ENST00000520724 CAPN2P17655 700 aa13.94□□□□□ -0.18
RUNX1T1-227ENST00000520724 BRPF1P55201 1214 aaPredicted RBP13.94□□□□□ -0.18
RUNX1T1-227ENST00000520724 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
RUNX1T1-227ENST00000520724 GPATCH11Q8N954 259 aa13.94□□□□□ -0.18
RUNX1T1-227ENST00000520724 MAFGO15525 162 aa13.94□□□□□ -0.18
RUNX1T1-227ENST00000520724 ANAPC15P60006 121 aa13.94□□□□□ -0.18
RUNX1T1-227ENST00000520724 GABPB1Q06547 395 aaPredicted RBP13.94□□□□□ -0.18
RUNX1T1-227ENST00000520724 CC2D2BQ6DHV5 1058 aa13.94□□□□□ -0.18
RUNX1T1-227ENST00000520724 MAP2P11137 1827 aaKnown RBP13.94□□□□□ -0.18
RUNX1T1-227ENST00000520724 UBR3Q6ZT12 1888 aa13.94□□□□□ -0.18
RUNX1T1-227ENST00000520724 EIF4A2Q14240 407 aaKnown RBP13.93□□□□□ -0.18
RUNX1T1-227ENST00000520724 ZNF771Q7L3S4 317 aaPredicted RBP13.93□□□□□ -0.18
RUNX1T1-227ENST00000520724 NUDCQ9Y266 331 aa13.93□□□□□ -0.18
RUNX1T1-227ENST00000520724 A0A0G2JLW4 131 aa13.93□□□□□ -0.18
RUNX1T1-227ENST00000520724 MAP2K1Q02750 393 aaPredicted RBP13.93□□□□□ -0.18
RUNX1T1-227ENST00000520724 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
RUNX1T1-227ENST00000520724 NBPF9Q3BBW0 867 aa13.93□□□□□ -0.18
RUNX1T1-227ENST00000520724 NCAPGQ9BPX3 1015 aa13.93□□□□□ -0.18
RUNX1T1-227ENST00000520724 PKD1L3Q7Z443 1732 aa13.93□□□□□ -0.18
RUNX1T1-227ENST00000520724 PCNTO95613 3336 aa13.92□□□□□ -0.18
RUNX1T1-227ENST00000520724 KIF20BQ96Q89 1820 aa13.92□□□□□ -0.18
RUNX1T1-227ENST00000520724 ATP2B3Q16720 1220 aa13.91□□□□□ -0.18
RUNX1T1-227ENST00000520724 TRAPPC3LQ5T215 181 aa13.91□□□□□ -0.18
RUNX1T1-227ENST00000520724 ARHGEF1Q92888 912 aaKnown RBP13.91□□□□□ -0.18
RUNX1T1-227ENST00000520724 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
RUNX1T1-227ENST00000520724 CALCOCO1Q9P1Z2 691 aa13.91□□□□□ -0.18
RUNX1T1-227ENST00000520724 CCDC172P0C7W6 258 aa13.9□□□□□ -0.18
RUNX1T1-227ENST00000520724 MFAP1P55081 439 aaKnown RBP13.9□□□□□ -0.18
RUNX1T1-227ENST00000520724 CTR9Q6PD62 1173 aa13.9□□□□□ -0.18
RUNX1T1-227ENST00000520724 SMC4Q9NTJ3 1288 aa13.9□□□□□ -0.18
RUNX1T1-227ENST00000520724 BCS1LQ9Y276 419 aa13.9□□□□□ -0.18
RUNX1T1-227ENST00000520724 RTCBQ9Y3I0 505 aaKnown RBP13.9□□□□□ -0.18
RUNX1T1-227ENST00000520724 PXDNLA1KZ92 1463 aa13.89□□□□□ -0.19
RUNX1T1-227ENST00000520724 CT47A1Q5JQC4 288 aaPredicted RBP13.89□□□□□ -0.19
RUNX1T1-227ENST00000520724 GYS1P13807 737 aa13.88□□□□□ -0.19
RUNX1T1-227ENST00000520724 NLGN1Q8N2Q7 840 aa13.88□□□□□ -0.19
RUNX1T1-227ENST00000520724 ZBTB9Q96C00 473 aa13.88□□□□□ -0.19
RUNX1T1-227ENST00000520724 KDRP35968 1356 aa13.88□□□□□ -0.19
RUNX1T1-227ENST00000520724 GOLIM4O00461 696 aa13.88□□□□□ -0.19
RUNX1T1-227ENST00000520724 DPEP1P16444 411 aa13.88□□□□□ -0.19
RUNX1T1-227ENST00000520724 MCM5P33992 734 aa13.88□□□□□ -0.19
RUNX1T1-227ENST00000520724 TGFB2P61812 414 aa13.88□□□□□ -0.19
RUNX1T1-227ENST00000520724 NBPF10Q6P3W6 841 aaKnown RBP13.88□□□□□ -0.19
RUNX1T1-227ENST00000520724 EP400NLQ6ZTU2 488 aa13.88□□□□□ -0.19
RUNX1T1-227ENST00000520724 ERVV-2B6SEH9 535 aa13.87□□□□□ -0.19
RUNX1T1-227ENST00000520724 KCNA3P22001 575 aa13.87□□□□□ -0.19
RUNX1T1-227ENST00000520724 ARHGAP27Q6ZUM4 889 aa13.87□□□□□ -0.19
RUNX1T1-227ENST00000520724 ANTXR1Q9H6X2 564 aa13.87□□□□□ -0.19
RUNX1T1-227ENST00000520724 MCM4P33991 863 aa13.87□□□□□ -0.19
RUNX1T1-227ENST00000520724 GTF2F1P35269 517 aaKnown RBP eCLIP13.87□□□□□ -0.19
RUNX1T1-227ENST00000520724 RC3H1Q5TC82 1133 aaKnown RBP13.87□□□□□ -0.19
RUNX1T1-227ENST00000520724 MYRIPQ8NFW9 859 aa13.87□□□□□ -0.19
RUNX1T1-227ENST00000520724 BSDC1Q9NW68 430 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms