RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 PCDHB3Q9Y5E6 796 aa11.09□□□□□ -0.63
SFXN1-211ENST00000515736 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
SFXN1-211ENST00000515736 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
SFXN1-211ENST00000515736 MSS51Q4VC12 460 aa11.08□□□□□ -0.64
SFXN1-211ENST00000515736 ZNF326Q5BKZ1 582 aaKnown RBP11.08□□□□□ -0.64
SFXN1-211ENST00000515736 POTEAQ6S8J7 498 aa11.08□□□□□ -0.64
SFXN1-211ENST00000515736 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.08□□□□□ -0.64
SFXN1-211ENST00000515736 PPLO60437 1756 aa11.08□□□□□ -0.64
SFXN1-211ENST00000515736 DIP2AQ14689 1571 aa11.07□□□□□ -0.64
SFXN1-211ENST00000515736 SETBP1Q9Y6X0 1596 aa11.07□□□□□ -0.64
SFXN1-211ENST00000515736 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.07□□□□□ -0.64
SFXN1-211ENST00000515736 EIF3AQ14152 1382 aaKnown RBP11.07□□□□□ -0.64
SFXN1-211ENST00000515736 JCADQ9P266 1359 aa11.07□□□□□ -0.64
SFXN1-211ENST00000515736 COL16A1Q07092 1604 aaPredicted RBP11.07□□□□□ -0.64
SFXN1-211ENST00000515736 RBM47A0AV96 593 aaKnown RBP11.07□□□□□ -0.64
SFXN1-211ENST00000515736 DXOO77932 396 aaKnown RBP11.07□□□□□ -0.64
SFXN1-211ENST00000515736 MAP7D1Q3KQU3 841 aa11.07□□□□□ -0.64
SFXN1-211ENST00000515736 OTUD5Q96G74 571 aa11.07□□□□□ -0.64
SFXN1-211ENST00000515736 HPS5Q9UPZ3 1129 aa11.07□□□□□ -0.64
SFXN1-211ENST00000515736 SOWAHBA6NEL2 793 aa11.06□□□□□ -0.64
SFXN1-211ENST00000515736 UNCXA6NJT0 531 aa11.06□□□□□ -0.64
SFXN1-211ENST00000515736 EMP3P54852 163 aa11.06□□□□□ -0.64
SFXN1-211ENST00000515736 NBPF14Q5TI25 921 aa11.06□□□□□ -0.64
SFXN1-211ENST00000515736 TRAF7Q6Q0C0 670 aa11.06□□□□□ -0.64
SFXN1-211ENST00000515736 ADGRD1Q6QNK2 874 aa11.06□□□□□ -0.64
SFXN1-211ENST00000515736 DNAJC14Q6Y2X3 702 aaPredicted RBP11.06□□□□□ -0.64
SFXN1-211ENST00000515736 ANKK1Q8NFD2 765 aa11.06□□□□□ -0.64
SFXN1-211ENST00000515736 NUDT12Q9BQG2 462 aa11.06□□□□□ -0.64
SFXN1-211ENST00000515736 TBX22Q9Y458 520 aa11.06□□□□□ -0.64
SFXN1-211ENST00000515736 NRXN1Q9ULB1 1477 aa11.06□□□□□ -0.64
SFXN1-211ENST00000515736 SOWAHDA6NJG2 315 aa11.05□□□□□ -0.64
SFXN1-211ENST00000515736 ATF3P18847 181 aa11.05□□□□□ -0.64
SFXN1-211ENST00000515736 SWI5Q1ZZU3 235 aa11.05□□□□□ -0.64
SFXN1-211ENST00000515736 EML3Q32P44 896 aa11.05□□□□□ -0.64
SFXN1-211ENST00000515736 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
SFXN1-211ENST00000515736 OGFOD1Q8N543 542 aa11.05□□□□□ -0.64
SFXN1-211ENST00000515736 ADAMTS13Q76LX8 1427 aa11.04□□□□□ -0.64
SFXN1-211ENST00000515736 ST20-MTHFSA0A0A6YYL1 179 aa11.04□□□□□ -0.64
SFXN1-211ENST00000515736 HRO43593 1189 aa11.04□□□□□ -0.64
SFXN1-211ENST00000515736 IGSF3O75054 1194 aa11.04□□□□□ -0.64
SFXN1-211ENST00000515736 ERCC3P19447 782 aa11.04□□□□□ -0.64
SFXN1-211ENST00000515736 ATP2B4P23634 1241 aa11.04□□□□□ -0.64
SFXN1-211ENST00000515736 MMP16P51512 607 aa11.04□□□□□ -0.64
SFXN1-211ENST00000515736 DPYDQ12882 1025 aa11.04□□□□□ -0.64
SFXN1-211ENST00000515736 FAM160A2Q8N612 972 aaPredicted RBP11.04□□□□□ -0.64
SFXN1-211ENST00000515736 ADAM32Q8TC27 787 aa11.04□□□□□ -0.64
SFXN1-211ENST00000515736 TSR3Q9UJK0 312 aaKnown RBP11.04□□□□□ -0.64
SFXN1-211ENST00000515736 CLDN10P78369 228 aa11.03□□□□□ -0.64
SFXN1-211ENST00000515736 RALBP1Q15311 655 aa11.03□□□□□ -0.64
SFXN1-211ENST00000515736 SHPRHQ149N8 1683 aa11.03□□□□□ -0.64
SFXN1-211ENST00000515736 INSRP06213 1382 aa11.03□□□□□ -0.64
SFXN1-211ENST00000515736 NCOA3Q9Y6Q9 1424 aa11.02□□□□□ -0.64
SFXN1-211ENST00000515736 FAM205CA6NFA0 338 aa11.02□□□□□ -0.65
SFXN1-211ENST00000515736 ST18O60284 1047 aa11.02□□□□□ -0.65
SFXN1-211ENST00000515736 SERPINB4P48594 390 aa11.02□□□□□ -0.65
SFXN1-211ENST00000515736 BCAMP50895 628 aa11.02□□□□□ -0.65
SFXN1-211ENST00000515736 TRIM50Q86XT4 487 aa11.02□□□□□ -0.65
SFXN1-211ENST00000515736 ARHGAP9Q9BRR9 750 aa11.02□□□□□ -0.65
SFXN1-211ENST00000515736 C19orf44Q9H6X5 657 aa11.02□□□□□ -0.65
SFXN1-211ENST00000515736 AHDC1Q5TGY3 1603 aaPredicted RBP11.02□□□□□ -0.65
SFXN1-211ENST00000515736 PIK3R4Q99570 1358 aa11.02□□□□□ -0.65
SFXN1-211ENST00000515736 TMF1P82094 1093 aa11.01□□□□□ -0.65
SFXN1-211ENST00000515736 RGL3Q3MIN7 710 aa11.01□□□□□ -0.65
SFXN1-211ENST00000515736 TSGA10IPQ3SY00 556 aa11.01□□□□□ -0.65
SFXN1-211ENST00000515736 C1orf216Q8TAB5 229 aa11.01□□□□□ -0.65
SFXN1-211ENST00000515736 MARVELD3Q96A59 401 aa11.01□□□□□ -0.65
SFXN1-211ENST00000515736 ZNF594Q96JF6 807 aaPredicted RBP11.01□□□□□ -0.65
SFXN1-211ENST00000515736 SPSB2Q99619 263 aa11.01□□□□□ -0.65
SFXN1-211ENST00000515736 DNAAF2Q9NVR5 837 aaKnown RBP11.01□□□□□ -0.65
SFXN1-211ENST00000515736 SPATA31A6Q5VVP1 1343 aa11.01□□□□□ -0.65
SFXN1-211ENST00000515736 RPGRIP1LQ68CZ1 1315 aa11.01□□□□□ -0.65
SFXN1-211ENST00000515736 LRP6O75581 1613 aa11.01□□□□□ -0.65
SFXN1-211ENST00000515736 BRD4O60885 1362 aaPredicted RBP11.01□□□□□ -0.65
SFXN1-211ENST00000515736 SBNO2Q9Y2G9 1366 aa11.01□□□□□ -0.65
SFXN1-211ENST00000515736 GOLGA8CPA6NN73 597 aa11□□□□□ -0.65
SFXN1-211ENST00000515736 DKK1O94907 266 aa11□□□□□ -0.65
SFXN1-211ENST00000515736 ATP1A2P50993 1020 aa11□□□□□ -0.65
SFXN1-211ENST00000515736 LSM11P83369 360 aaKnown RBP eCLIP11□□□□□ -0.65
SFXN1-211ENST00000515736 SH3BP5LQ7L8J4 393 aa11□□□□□ -0.65
SFXN1-211ENST00000515736 LARGE2Q8N3Y3 721 aa11□□□□□ -0.65
SFXN1-211ENST00000515736 MRS2Q9HD23 443 aa11□□□□□ -0.65
SFXN1-211ENST00000515736 NOD1Q9Y239 953 aa11□□□□□ -0.65
SFXN1-211ENST00000515736 ZBED9Q6R2W3 1325 aa11□□□□□ -0.65
SFXN1-211ENST00000515736 XRN1Q8IZH2 1706 aaKnown RBP11□□□□□ -0.65
SFXN1-211ENST00000515736 NRXN3Q9Y4C0 1643 aa10.99□□□□□ -0.65
SFXN1-211ENST00000515736 NEFLP07196 543 aa10.99□□□□□ -0.65
SFXN1-211ENST00000515736 NOM1Q5C9Z4 860 aaKnown RBP10.99□□□□□ -0.65
SFXN1-211ENST00000515736 ERICH6BQ5W0A0 696 aa10.99□□□□□ -0.65
SFXN1-211ENST00000515736 ZBTB33Q86T24 672 aa10.99□□□□□ -0.65
SFXN1-211ENST00000515736 PRDM9Q9NQV7 894 aa10.99□□□□□ -0.65
SFXN1-211ENST00000515736 PTPRUQ92729 1446 aa10.99□□□□□ -0.65
SFXN1-211ENST00000515736 MYOM1P52179 1685 aa10.98□□□□□ -0.65
SFXN1-211ENST00000515736 SCNN1AP37088 669 aa10.98□□□□□ -0.65
SFXN1-211ENST00000515736 ZNF772Q68DY9 489 aaPredicted RBP10.98□□□□□ -0.65
SFXN1-211ENST00000515736 SIX5Q8N196 739 aa10.98□□□□□ -0.65
SFXN1-211ENST00000515736 CCDC85AQ96PX6 553 aaPredicted RBP10.98□□□□□ -0.65
SFXN1-211ENST00000515736 TESK2Q96S53 571 aa10.98□□□□□ -0.65
SFXN1-211ENST00000515736 MYBBP1AQ9BQG0 1328 aaKnown RBP10.98□□□□□ -0.65
SFXN1-211ENST00000515736 PARD3Q8TEW0 1356 aa10.98□□□□□ -0.65
SFXN1-211ENST00000515736 ZBTB7BO15156 539 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms