RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 TMPOP42166 694 aaKnown RBP22.99■■□□□ 1.27
DDX41-217ENST00000515562 RASSF7Q02833 373 aa22.99■■□□□ 1.27
DDX41-217ENST00000515562 WDR43Q15061 677 aaKnown RBP eCLIP22.99■■□□□ 1.27
DDX41-217ENST00000515562 CCDC24Q8N4L8 307 aa22.99■■□□□ 1.27
DDX41-217ENST00000515562 BABAM1Q9NWV8 329 aa22.99■■□□□ 1.27
DDX41-217ENST00000515562 TSPYL4Q9UJ04 414 aa22.99■■□□□ 1.27
DDX41-217ENST00000515562 NIP7Q9Y221 180 aaKnown RBP eCLIP22.99■■□□□ 1.27
DDX41-217ENST00000515562 ARFGEF2Q9Y6D5 1785 aa22.99■■□□□ 1.27
DDX41-217ENST00000515562 TNRC6CQ9HCJ0 1690 aaKnown RBP22.98■■□□□ 1.27
DDX41-217ENST00000515562 LMNB1P20700 586 aa22.98■■□□□ 1.27
DDX41-217ENST00000515562 ERBB4Q15303 1308 aa22.98■■□□□ 1.27
DDX41-217ENST00000515562 KDM2BQ8NHM5 1336 aa22.98■■□□□ 1.27
DDX41-217ENST00000515562 TIAM2Q8IVF5 1701 aa22.97■■□□□ 1.27
DDX41-217ENST00000515562 STYK1Q6J9G0 422 aa22.97■■□□□ 1.27
DDX41-217ENST00000515562 CNKSR1Q969H4 720 aa22.97■■□□□ 1.27
DDX41-217ENST00000515562 SRGNP10124 158 aa22.96■■□□□ 1.27
DDX41-217ENST00000515562 TPTE2Q6XPS3 522 aa22.96■■□□□ 1.27
DDX41-217ENST00000515562 KIF6Q6ZMV9 814 aa22.96■■□□□ 1.27
DDX41-217ENST00000515562 NMRK2Q9NPI5 230 aa22.96■■□□□ 1.27
DDX41-217ENST00000515562 ERVV-1B6SEH8 477 aa22.95■■□□□ 1.26
DDX41-217ENST00000515562 CACNA1SQ13698 1873 aa22.95■■□□□ 1.26
DDX41-217ENST00000515562 MAP3K15Q6ZN16 1313 aa22.95■■□□□ 1.26
DDX41-217ENST00000515562 MASTLQ96GX5 879 aa22.95■■□□□ 1.26
DDX41-217ENST00000515562 NFKBIEO00221 500 aa22.94■■□□□ 1.26
DDX41-217ENST00000515562 TOMM70O94826 608 aa22.94■■□□□ 1.26
DDX41-217ENST00000515562 HSPA6P17066 643 aa22.94■■□□□ 1.26
DDX41-217ENST00000515562 CCDC146Q8IYE0 955 aa22.94■■□□□ 1.26
DDX41-217ENST00000515562 RUNDC1Q96C34 613 aa22.94■■□□□ 1.26
DDX41-217ENST00000515562 PRKRIP1Q9H875 184 aaPredicted RBP22.94■■□□□ 1.26
DDX41-217ENST00000515562 RRP7AQ9Y3A4 280 aaKnown RBP22.94■■□□□ 1.26
DDX41-217ENST00000515562 FER1L6Q2WGJ9 1857 aa22.94■■□□□ 1.26
DDX41-217ENST00000515562 NUP98P52948 1817 aa22.94■■□□□ 1.26
DDX41-217ENST00000515562 C21orf2O43822 256 aa22.93■■□□□ 1.26
DDX41-217ENST00000515562 MYL6BP14649 208 aa22.93■■□□□ 1.26
DDX41-217ENST00000515562 HLFQ16534 295 aa22.93■■□□□ 1.26
DDX41-217ENST00000515562 SOGA3Q5TF21 947 aa22.93■■□□□ 1.26
DDX41-217ENST00000515562 NGEFQ8N5V2 710 aa22.93■■□□□ 1.26
DDX41-217ENST00000515562 PRPF40BQ6NWY9 871 aaKnown RBP22.92■■□□□ 1.26
DDX41-217ENST00000515562 SLX4Q8IY92 1834 aa22.92■■□□□ 1.26
DDX41-217ENST00000515562 NYXQ9GZU5 481 aa22.91■■□□□ 1.26
DDX41-217ENST00000515562 CCDC88AQ3V6T2 1871 aa22.91■■□□□ 1.26
DDX41-217ENST00000515562 IBTKQ9P2D0 1353 aaPredicted RBP22.9■■□□□ 1.26
DDX41-217ENST00000515562 LTBP3Q9NS15 1303 aa22.9■■□□□ 1.26
DDX41-217ENST00000515562 KLRG2A4D1S0 409 aaPredicted RBP22.9■■□□□ 1.26
DDX41-217ENST00000515562 NPR1P16066 1061 aa22.9■■□□□ 1.26
DDX41-217ENST00000515562 GTF2E1P29083 439 aaPredicted RBP22.9■■□□□ 1.26
DDX41-217ENST00000515562 PRELPP51888 382 aa22.9■■□□□ 1.26
DDX41-217ENST00000515562 NEUROD2Q15784 382 aa22.9■■□□□ 1.26
DDX41-217ENST00000515562 C16orf71Q8IYS4 520 aaPredicted RBP22.9■■□□□ 1.26
DDX41-217ENST00000515562 ZNF219Q9P2Y4 722 aaPredicted RBP22.9■■□□□ 1.26
DDX41-217ENST00000515562 FAM177BA6PVY3 158 aa22.89■■□□□ 1.25
DDX41-217ENST00000515562 TTLL7Q6ZT98 887 aa22.89■■□□□ 1.25
DDX41-217ENST00000515562 TAOK3Q9H2K8 898 aa22.89■■□□□ 1.25
DDX41-217ENST00000515562 ADAMTS8Q9UP79 889 aa22.89■■□□□ 1.25
DDX41-217ENST00000515562 DICER1Q9UPY3 1922 aaKnown RBP22.88■■□□□ 1.25
DDX41-217ENST00000515562 RBM46Q8TBY0 533 aaKnown RBP22.88■■□□□ 1.25
DDX41-217ENST00000515562 ZBTB3Q9H5J0 574 aa22.88■■□□□ 1.25
DDX41-217ENST00000515562 RIC1Q4ADV7 1423 aa22.88■■□□□ 1.25
DDX41-217ENST00000515562 TRIM35Q9UPQ4 493 aa22.87■■□□□ 1.25
DDX41-217ENST00000515562 CEP350Q5VT06 3117 aa22.86■■□□□ 1.25
DDX41-217ENST00000515562 GLTPD2A6NH11 291 aa22.86■■□□□ 1.25
DDX41-217ENST00000515562 EIF2S2P20042 333 aaKnown RBP22.86■■□□□ 1.25
DDX41-217ENST00000515562 ABCC12Q96J65 1359 aa22.86■■□□□ 1.25
DDX41-217ENST00000515562 CHL1O00533 1208 aa22.85■■□□□ 1.25
DDX41-217ENST00000515562 GIGYF2Q6Y7W6 1299 aaKnown RBP22.85■■□□□ 1.25
DDX41-217ENST00000515562 LRP10Q7Z4F1 713 aa22.85■■□□□ 1.25
DDX41-217ENST00000515562 RRAGCQ9HB90 399 aa22.85■■□□□ 1.25
DDX41-217ENST00000515562 UBN2Q6ZU65 1347 aa22.84■■□□□ 1.25
DDX41-217ENST00000515562 ZEB1P37275 1124 aaPredicted RBP22.84■■□□□ 1.25
DDX41-217ENST00000515562 PDIA6Q15084 440 aa22.84■■□□□ 1.25
DDX41-217ENST00000515562 ERFEQ4G0M1 354 aa22.84■■□□□ 1.25
DDX41-217ENST00000515562 CCDC93Q567U6 631 aa22.84■■□□□ 1.25
DDX41-217ENST00000515562 GPTP24298 496 aa22.83■■□□□ 1.25
DDX41-217ENST00000515562 ALDH1B1P30837 517 aa22.83■■□□□ 1.25
DDX41-217ENST00000515562 CRY2Q49AN0 593 aa22.83■■□□□ 1.25
DDX41-217ENST00000515562 NUTM1Q86Y26 1132 aa22.83■■□□□ 1.25
DDX41-217ENST00000515562 ZNF34Q8IZ26 560 aa22.83■■□□□ 1.25
DDX41-217ENST00000515562 C7orf43Q8WVR3 580 aa22.83■■□□□ 1.25
DDX41-217ENST00000515562 LAS1LQ9Y4W2 734 aaKnown RBP22.83■■□□□ 1.25
DDX41-217ENST00000515562 APLP1P51693 650 aa22.82■■□□□ 1.24
DDX41-217ENST00000515562 FSTL1Q12841 308 aa22.82■■□□□ 1.24
DDX41-217ENST00000515562 PARP10Q53GL7 1025 aa22.82■■□□□ 1.24
DDX41-217ENST00000515562 DPY19L2Q6NUT2 758 aa22.82■■□□□ 1.24
DDX41-217ENST00000515562 WDR90Q96KV7 1748 aa22.82■■□□□ 1.24
DDX41-217ENST00000515562 ANKRD36CQ5JPF3 1778 aa22.81■■□□□ 1.24
DDX41-217ENST00000515562 HOXB7P09629 217 aa22.81■■□□□ 1.24
DDX41-217ENST00000515562 PROSER3Q2NL68 480 aa22.81■■□□□ 1.24
DDX41-217ENST00000515562 PPP1R42Q7Z4L9 355 aa22.81■■□□□ 1.24
DDX41-217ENST00000515562 VEGFAP15692 232 aaPredicted RBP22.8■■□□□ 1.24
DDX41-217ENST00000515562 SUSD4Q5VX71 490 aa22.8■■□□□ 1.24
DDX41-217ENST00000515562 NTSR2O95665 410 aa22.79■■□□□ 1.24
DDX41-217ENST00000515562 ANXA1P04083 346 aa22.79■■□□□ 1.24
DDX41-217ENST00000515562 RTKN2Q8IZC4 609 aa22.79■■□□□ 1.24
DDX41-217ENST00000515562 CFAP44Q96MT7 982 aa22.79■■□□□ 1.24
DDX41-217ENST00000515562 DDX21Q9NR30 783 aaKnown RBP eCLIP22.79■■□□□ 1.24
DDX41-217ENST00000515562 FKBP4Q02790 459 aaKnown RBP eCLIP22.78■■□□□ 1.24
DDX41-217ENST00000515562 KRT24Q2M2I5 525 aa22.78■■□□□ 1.24
DDX41-217ENST00000515562 HSP90AB3PQ58FF7 597 aa22.78■■□□□ 1.24
DDX41-217ENST00000515562 SMC1BQ8NDV3 1235 aa22.78■■□□□ 1.24
DDX41-217ENST00000515562 NECTIN2Q92692 538 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms