RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 BRIP1Q9BX63 1249 aa19.34■□□□□ 0.69
SGCA-211ENST00000514934 RRP7AQ9Y3A4 280 aaKnown RBP19.34■□□□□ 0.69
SGCA-211ENST00000514934 PDIA6Q15084 440 aa19.33■□□□□ 0.68
SGCA-211ENST00000514934 ARHGAP27Q6ZUM4 889 aa19.33■□□□□ 0.68
SGCA-211ENST00000514934 C2CD5Q86YS7 1000 aa19.33■□□□□ 0.68
SGCA-211ENST00000514934 BABAM1Q9NWV8 329 aa19.33■□□□□ 0.68
SGCA-211ENST00000514934 RUNDC1Q96C34 613 aa19.32■□□□□ 0.68
SGCA-211ENST00000514934 SETDB2Q96T68 719 aa19.32■□□□□ 0.68
SGCA-211ENST00000514934 KLRG2A4D1S0 409 aaPredicted RBP19.31■□□□□ 0.68
SGCA-211ENST00000514934 KIF3CO14782 793 aa19.31■□□□□ 0.68
SGCA-211ENST00000514934 CCDC184Q52MB2 194 aa19.31■□□□□ 0.68
SGCA-211ENST00000514934 TTLL7Q6ZT98 887 aa19.31■□□□□ 0.68
SGCA-211ENST00000514934 ERBB4Q15303 1308 aa19.3■□□□□ 0.68
SGCA-211ENST00000514934 CHL1O00533 1208 aa19.3■□□□□ 0.68
SGCA-211ENST00000514934 CNBD1Q8NA66 436 aa19.3■□□□□ 0.68
SGCA-211ENST00000514934 TSPYL4Q9UJ04 414 aa19.3■□□□□ 0.68
SGCA-211ENST00000514934 NFKBIEO00221 500 aa19.29■□□□□ 0.68
SGCA-211ENST00000514934 C9orf131Q5VYM1 1079 aa19.29■□□□□ 0.68
SGCA-211ENST00000514934 TTLL6Q8N841 843 aa19.29■□□□□ 0.68
SGCA-211ENST00000514934 MAP3K15Q6ZN16 1313 aa19.28■□□□□ 0.68
SGCA-211ENST00000514934 SNED1Q8TER0 1413 aa19.28■□□□□ 0.68
SGCA-211ENST00000514934 ERVV-1B6SEH8 477 aa19.28■□□□□ 0.68
SGCA-211ENST00000514934 H0YIN7 160 aa19.28■□□□□ 0.68
SGCA-211ENST00000514934 SRGNP10124 158 aa19.28■□□□□ 0.68
SGCA-211ENST00000514934 RASSF7Q02833 373 aa19.28■□□□□ 0.68
SGCA-211ENST00000514934 LMOD3Q0VAK6 560 aa19.28■□□□□ 0.68
SGCA-211ENST00000514934 KRT24Q2M2I5 525 aa19.28■□□□□ 0.68
SGCA-211ENST00000514934 PROSER3Q2NL68 480 aa19.28■□□□□ 0.68
SGCA-211ENST00000514934 GPBP1L1Q9HC44 474 aaPredicted RBP19.28■□□□□ 0.68
SGCA-211ENST00000514934 ABCC12Q96J65 1359 aa19.28■□□□□ 0.68
SGCA-211ENST00000514934 UBN2Q6ZU65 1347 aa19.27■□□□□ 0.68
SGCA-211ENST00000514934 RIC1Q4ADV7 1423 aa19.27■□□□□ 0.68
SGCA-211ENST00000514934 PDE6BP35913 854 aa19.27■□□□□ 0.68
SGCA-211ENST00000514934 ZNF526Q8TF50 670 aaPredicted RBP19.27■□□□□ 0.68
SGCA-211ENST00000514934 PDZRN3Q9UPQ7 1066 aa19.27■□□□□ 0.68
SGCA-211ENST00000514934 DDX60Q8IY21 1712 aaKnown RBP19.26■□□□□ 0.67
SGCA-211ENST00000514934 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
SGCA-211ENST00000514934 WDR43Q15061 677 aaKnown RBP eCLIP19.26■□□□□ 0.67
SGCA-211ENST00000514934 NIP7Q9Y221 180 aaKnown RBP eCLIP19.26■□□□□ 0.67
SGCA-211ENST00000514934 ZNF652Q9Y2D9 606 aa19.26■□□□□ 0.67
SGCA-211ENST00000514934 IBTKQ9P2D0 1353 aaPredicted RBP19.26■□□□□ 0.67
SGCA-211ENST00000514934 TAF1P21675 1872 aa19.26■□□□□ 0.67
SGCA-211ENST00000514934 ZNF853P0CG23 659 aa19.25■□□□□ 0.67
SGCA-211ENST00000514934 NEUROD2Q15784 382 aa19.25■□□□□ 0.67
SGCA-211ENST00000514934 STYK1Q6J9G0 422 aa19.25■□□□□ 0.67
SGCA-211ENST00000514934 C7orf43Q8WVR3 580 aa19.25■□□□□ 0.67
SGCA-211ENST00000514934 MYL6BP14649 208 aa19.24■□□□□ 0.67
SGCA-211ENST00000514934 NPM2Q86SE8 214 aaKnown RBP19.24■□□□□ 0.67
SGCA-211ENST00000514934 NBPF5PQ86XG9 351 aaPredicted RBP19.24■□□□□ 0.67
SGCA-211ENST00000514934 ZNF34Q8IZ26 560 aa19.24■□□□□ 0.67
SGCA-211ENST00000514934 WDR90Q96KV7 1748 aa19.24■□□□□ 0.67
SGCA-211ENST00000514934 ANXA1P04083 346 aa19.23■□□□□ 0.67
SGCA-211ENST00000514934 NMRK2Q9NPI5 230 aa19.23■□□□□ 0.67
SGCA-211ENST00000514934 RNF181Q9P0P0 153 aa19.23■□□□□ 0.67
SGCA-211ENST00000514934 ST5P78524 1137 aa19.22■□□□□ 0.67
SGCA-211ENST00000514934 PRPF40BQ6NWY9 871 aaKnown RBP19.22■□□□□ 0.67
SGCA-211ENST00000514934 NGEFQ8N5V2 710 aa19.22■□□□□ 0.67
SGCA-211ENST00000514934 LTBP3Q9NS15 1303 aa19.22■□□□□ 0.67
SGCA-211ENST00000514934 APAF1O14727 1248 aa19.21■□□□□ 0.67
SGCA-211ENST00000514934 CRY2Q49AN0 593 aa19.21■□□□□ 0.67
SGCA-211ENST00000514934 GIGYF2Q6Y7W6 1299 aaKnown RBP19.21■□□□□ 0.67
SGCA-211ENST00000514934 ZNF622Q969S3 477 aaKnown RBP eCLIP19.21■□□□□ 0.67
SGCA-211ENST00000514934 ZBTB3Q9H5J0 574 aa19.21■□□□□ 0.67
SGCA-211ENST00000514934 ZC3H4Q9UPT8 1303 aaKnown RBP19.21■□□□□ 0.67
SGCA-211ENST00000514934 C21orf2O43822 256 aa19.2■□□□□ 0.66
SGCA-211ENST00000514934 NTSR2O95665 410 aa19.2■□□□□ 0.66
SGCA-211ENST00000514934 LMNB1P20700 586 aa19.2■□□□□ 0.66
SGCA-211ENST00000514934 TPTE2Q6XPS3 522 aa19.2■□□□□ 0.66
SGCA-211ENST00000514934 MASTLQ96GX5 879 aa19.2■□□□□ 0.66
SGCA-211ENST00000514934 CFAP44Q96MT7 982 aa19.2■□□□□ 0.66
SGCA-211ENST00000514934 EIF2S2P20042 333 aaKnown RBP19.19■□□□□ 0.66
SGCA-211ENST00000514934 SUSD4Q5VX71 490 aa19.19■□□□□ 0.66
SGCA-211ENST00000514934 CNKSR1Q969H4 720 aa19.19■□□□□ 0.66
SGCA-211ENST00000514934 MBIPQ9NS73 344 aa19.19■□□□□ 0.66
SGCA-211ENST00000514934 NPR1P16066 1061 aa19.18■□□□□ 0.66
SGCA-211ENST00000514934 GPTP24298 496 aa19.18■□□□□ 0.66
SGCA-211ENST00000514934 ERFEQ4G0M1 354 aa19.18■□□□□ 0.66
SGCA-211ENST00000514934 KIF6Q6ZMV9 814 aa19.18■□□□□ 0.66
SGCA-211ENST00000514934 NUTM1Q86Y26 1132 aa19.18■□□□□ 0.66
SGCA-211ENST00000514934 CACNA1FO60840 1977 aa19.18■□□□□ 0.66
SGCA-211ENST00000514934 COL4A5P29400 1685 aa19.17■□□□□ 0.66
SGCA-211ENST00000514934 ZNF316A6NFI3 1004 aaPredicted RBP19.17■□□□□ 0.66
SGCA-211ENST00000514934 FAM177BA6PVY3 158 aa19.17■□□□□ 0.66
SGCA-211ENST00000514934 HOXB7P09629 217 aa19.17■□□□□ 0.66
SGCA-211ENST00000514934 C3orf67Q6ZVT6 689 aa19.17■□□□□ 0.66
SGCA-211ENST00000514934 DDX21Q9NR30 783 aaKnown RBP eCLIP19.17■□□□□ 0.66
SGCA-211ENST00000514934 COL4A1P02462 1669 aa19.17■□□□□ 0.66
SGCA-211ENST00000514934 LRRC37AA6NMS7 1700 aa19.17■□□□□ 0.66
SGCA-211ENST00000514934 OLFM4Q6UX06 510 aa19.16■□□□□ 0.66
SGCA-211ENST00000514934 SLC51AQ86UW1 340 aa19.16■□□□□ 0.66
SGCA-211ENST00000514934 NECTIN2Q92692 538 aa19.16■□□□□ 0.66
SGCA-211ENST00000514934 CHPF2Q9P2E5 772 aa19.16■□□□□ 0.66
SGCA-211ENST00000514934 COPS6Q7L5N1 327 aa19.15■□□□□ 0.66
SGCA-211ENST00000514934 XAGE3Q8WTP9 111 aa19.15■□□□□ 0.66
SGCA-211ENST00000514934 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
SGCA-211ENST00000514934 SCN4AP35499 1836 aa19.15■□□□□ 0.66
SGCA-211ENST00000514934 POTECB2RU33 542 aa19.14■□□□□ 0.65
SGCA-211ENST00000514934 HOXA10P31260 410 aaPredicted RBP19.14■□□□□ 0.65
SGCA-211ENST00000514934 NYXQ9GZU5 481 aa19.14■□□□□ 0.65
SGCA-211ENST00000514934 IFT57Q9NWB7 429 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms