RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 SSH2Q76I76 1423 aa7.25□□□□□ -1.25
HTT-211ENST00000513326 CEP350Q5VT06 3117 aa7.25□□□□□ -1.25
HTT-211ENST00000513326 NUTM2GQ5VZR2 741 aa7.24□□□□□ -1.25
HTT-211ENST00000513326 DESI1Q6ICB0 168 aa7.24□□□□□ -1.25
HTT-211ENST00000513326 LARP1Q6PKG0 1096 aaKnown RBP7.24□□□□□ -1.25
HTT-211ENST00000513326 BRICD5Q6PL45 260 aa7.24□□□□□ -1.25
HTT-211ENST00000513326 SCUBE3Q8IX30 993 aa7.24□□□□□ -1.25
HTT-211ENST00000513326 KCTD12Q96CX2 325 aaKnown RBP7.24□□□□□ -1.25
HTT-211ENST00000513326 FHDC1Q9C0D6 1143 aaPredicted RBP7.24□□□□□ -1.25
HTT-211ENST00000513326 ANKARQ7Z5J8 1434 aa7.24□□□□□ -1.25
HTT-211ENST00000513326 POTEMA6NI47 508 aa7.23□□□□□ -1.25
HTT-211ENST00000513326 FMNL1O95466 1100 aaPredicted RBP7.23□□□□□ -1.25
HTT-211ENST00000513326 ZC3H6P61129 1189 aaKnown RBP7.23□□□□□ -1.25
HTT-211ENST00000513326 CFAP70Q5T0N1 1121 aa7.23□□□□□ -1.25
HTT-211ENST00000513326 WWC1Q8IX03 1113 aa7.23□□□□□ -1.25
HTT-211ENST00000513326 USB1Q9BQ65 265 aaKnown RBP7.23□□□□□ -1.25
HTT-211ENST00000513326 SYT17Q9BSW7 474 aa7.23□□□□□ -1.25
HTT-211ENST00000513326 GDPD2Q9HCC8 539 aa7.23□□□□□ -1.25
HTT-211ENST00000513326 SHANK3Q9BYB0 1731 aa7.23□□□□□ -1.25
HTT-211ENST00000513326 CHD4Q14839 1912 aa7.23□□□□□ -1.25
HTT-211ENST00000513326 SBF2Q86WG5 1849 aa7.22□□□□□ -1.25
HTT-211ENST00000513326 LMO7Q8WWI1 1683 aa7.22□□□□□ -1.25
HTT-211ENST00000513326 PDE3BQ13370 1112 aa7.22□□□□□ -1.25
HTT-211ENST00000513326 BLOC1S3Q6QNY0 202 aa7.22□□□□□ -1.25
HTT-211ENST00000513326 RNF19BQ6ZMZ0 732 aa7.22□□□□□ -1.25
HTT-211ENST00000513326 ARXQ96QS3 562 aa7.22□□□□□ -1.25
HTT-211ENST00000513326 NDUFB9Q9Y6M9 179 aa7.22□□□□□ -1.25
HTT-211ENST00000513326 RGPD3A6NKT7 1758 aaPredicted RBP7.22□□□□□ -1.25
HTT-211ENST00000513326 RGPD4Q7Z3J3 1758 aa7.22□□□□□ -1.25
HTT-211ENST00000513326 LRRC37A3O60309 1634 aa7.22□□□□□ -1.25
HTT-211ENST00000513326 PARP4Q9UKK3 1724 aaKnown RBP7.21□□□□□ -1.25
HTT-211ENST00000513326 LRRN4Q8WUT4 740 aa7.21□□□□□ -1.26
HTT-211ENST00000513326 THAP11Q96EK4 314 aa7.21□□□□□ -1.26
HTT-211ENST00000513326 C14orf93Q9H972 538 aaKnown RBP7.21□□□□□ -1.26
HTT-211ENST00000513326 HMX1Q9NP08 348 aaPredicted RBP7.21□□□□□ -1.26
HTT-211ENST00000513326 TBC1D2BQ9UPU7 963 aa7.21□□□□□ -1.26
HTT-211ENST00000513326 TULP4Q9NRJ4 1543 aa7.21□□□□□ -1.26
HTT-211ENST00000513326 GPRASP1Q5JY77 1395 aa7.2□□□□□ -1.26
HTT-211ENST00000513326 ANKRD30BQ9BXX2 1392 aa7.2□□□□□ -1.26
HTT-211ENST00000513326 ADGRB1O14514 1584 aa7.2□□□□□ -1.26
HTT-211ENST00000513326 ABL2P42684 1182 aa7.2□□□□□ -1.26
HTT-211ENST00000513326 TCP11L2Q8N4U5 519 aa7.2□□□□□ -1.26
HTT-211ENST00000513326 SIRT1Q96EB6 747 aa7.2□□□□□ -1.26
HTT-211ENST00000513326 C1orf115Q9H7X2 142 aa7.2□□□□□ -1.26
HTT-211ENST00000513326 ZNF330Q9Y3S2 320 aaPredicted RBP7.2□□□□□ -1.26
HTT-211ENST00000513326 DLC1Q96QB1 1528 aa7.2□□□□□ -1.26
HTT-211ENST00000513326 ATP7BP35670 1465 aa7.19□□□□□ -1.26
HTT-211ENST00000513326 PER1O15534 1290 aaPredicted RBP7.19□□□□□ -1.26
HTT-211ENST00000513326 GIGYF1O75420 1035 aaPredicted RBP7.19□□□□□ -1.26
HTT-211ENST00000513326 LYPD8Q6UX82 237 aa7.19□□□□□ -1.26
HTT-211ENST00000513326 TRIM34Q9BYJ4 488 aa7.19□□□□□ -1.26
HTT-211ENST00000513326 OVOS2A0A0G2JMS6 1433 aa7.18□□□□□ -1.26
HTT-211ENST00000513326 OVOS2A0A0J9YW53 1432 aa7.18□□□□□ -1.26
HTT-211ENST00000513326 OVOS2Q6IE36 1432 aa7.18□□□□□ -1.26
HTT-211ENST00000513326 COL5A2P05997 1499 aaPredicted RBP7.18□□□□□ -1.26
HTT-211ENST00000513326 EVA1CP58658 441 aa7.18□□□□□ -1.26
HTT-211ENST00000513326 COPS2P61201 443 aa7.18□□□□□ -1.26
HTT-211ENST00000513326 NGDNQ8NEJ9 315 aaKnown RBP7.18□□□□□ -1.26
HTT-211ENST00000513326 SPSB2Q99619 263 aa7.18□□□□□ -1.26
HTT-211ENST00000513326 POGKQ9P215 609 aa7.18□□□□□ -1.26
HTT-211ENST00000513326 DHX57Q6P158 1386 aaKnown RBP7.18□□□□□ -1.26
HTT-211ENST00000513326 PLSCR1O15162 318 aa7.17□□□□□ -1.26
HTT-211ENST00000513326 JUNDP17535 347 aa7.17□□□□□ -1.26
HTT-211ENST00000513326 PTPN5P54829 565 aa7.17□□□□□ -1.26
HTT-211ENST00000513326 MSS51Q4VC12 460 aa7.17□□□□□ -1.26
HTT-211ENST00000513326 TRAK1Q9UPV9 953 aa7.17□□□□□ -1.26
HTT-211ENST00000513326 WNK3Q9BYP7 1800 aa7.17□□□□□ -1.26
HTT-211ENST00000513326 PAPPAQ13219 1627 aa7.16□□□□□ -1.26
HTT-211ENST00000513326 WASLO00401 505 aaPredicted RBP7.16□□□□□ -1.26
HTT-211ENST00000513326 ZPR1O75312 459 aa7.16□□□□□ -1.26
HTT-211ENST00000513326 NR6A1Q15406 480 aa7.16□□□□□ -1.26
HTT-211ENST00000513326 PTPRNQ16849 979 aa7.16□□□□□ -1.26
HTT-211ENST00000513326 TXNRD1Q16881 649 aa7.16□□□□□ -1.26
HTT-211ENST00000513326 MARCH10Q8NA82 808 aaPredicted RBP7.16□□□□□ -1.26
HTT-211ENST00000513326 PNMA1Q8ND90 353 aa7.16□□□□□ -1.26
HTT-211ENST00000513326 GOLGB1Q14789 3259 aaKnown RBP7.16□□□□□ -1.26
HTT-211ENST00000513326 USP19O94966 1318 aa7.16□□□□□ -1.26
HTT-211ENST00000513326 CPDO75976 1380 aa7.16□□□□□ -1.26
HTT-211ENST00000513326 TOPAZ1Q8N9V7 1692 aa7.16□□□□□ -1.26
HTT-211ENST00000513326 SLC15A2Q16348 729 aa7.15□□□□□ -1.26
HTT-211ENST00000513326 ZNF827Q17R98 1081 aa7.15□□□□□ -1.26
HTT-211ENST00000513326 WASHC4Q2M389 1173 aa7.15□□□□□ -1.26
HTT-211ENST00000513326 FAM160A2Q8N612 972 aaPredicted RBP7.15□□□□□ -1.26
HTT-211ENST00000513326 NLGN2Q8NFZ4 835 aa7.15□□□□□ -1.26
HTT-211ENST00000513326 EPS8L1Q8TE68 723 aa7.15□□□□□ -1.26
HTT-211ENST00000513326 MTRQ99707 1265 aa7.15□□□□□ -1.26
HTT-211ENST00000513326 MTFR1LQ9H019 292 aa7.15□□□□□ -1.26
HTT-211ENST00000513326 STK32BQ9NY57 414 aa7.15□□□□□ -1.26
HTT-211ENST00000513326 CRB1P82279 1406 aa7.15□□□□□ -1.27
HTT-211ENST00000513326 ZBTB7CA1YPR0 619 aa7.14□□□□□ -1.27
HTT-211ENST00000513326 YBX3P16989 372 aaKnown RBP eCLIP7.14□□□□□ -1.27
HTT-211ENST00000513326 IRF5Q13568 498 aa7.14□□□□□ -1.27
HTT-211ENST00000513326 ITSN1Q15811 1721 aa7.14□□□□□ -1.27
HTT-211ENST00000513326 GPR162Q16538 588 aa7.14□□□□□ -1.27
HTT-211ENST00000513326 NUDT16Q96DE0 195 aaKnown RBP7.14□□□□□ -1.27
HTT-211ENST00000513326 MAP3K5Q99683 1374 aa7.14□□□□□ -1.27
HTT-211ENST00000513326 ARID3AQ99856 593 aa7.14□□□□□ -1.27
HTT-211ENST00000513326 IL21Q9HBE4 155 aa7.14□□□□□ -1.27
HTT-211ENST00000513326 COL18A1P39060 1754 aa7.13□□□□□ -1.27
HTT-211ENST00000513326 AKAP12Q02952 1782 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms