RNA–Protein interactions for RNA: ENST00000513316.1

RAB3C-204, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-204ENST00000513316 C16orf46Q6P387 395 aa9.74□□□□□ -0.85
RAB3C-204ENST00000513316 FIGNL1Q6PIW4 674 aa9.74□□□□□ -0.85
RAB3C-204ENST00000513316 SV2AQ7L0J3 742 aa9.74□□□□□ -0.85
RAB3C-204ENST00000513316 ZNF837Q96EG3 531 aaPredicted RBP9.74□□□□□ -0.85
RAB3C-204ENST00000513316 MKNK1Q9BUB5 465 aa9.74□□□□□ -0.85
RAB3C-204ENST00000513316 EIF4G1Q04637 1599 aaKnown RBP9.74□□□□□ -0.85
RAB3C-204ENST00000513316 HOMEZQ8IX15 550 aa9.73□□□□□ -0.85
RAB3C-204ENST00000513316 NEUROD4Q9HD90 331 aa9.73□□□□□ -0.85
RAB3C-204ENST00000513316 GJA3Q9Y6H8 435 aa9.73□□□□□ -0.85
RAB3C-204ENST00000513316 CDC14CA4D256 554 aa9.72□□□□□ -0.85
RAB3C-204ENST00000513316 ARID4AP29374 1257 aaPredicted RBP9.72□□□□□ -0.85
RAB3C-204ENST00000513316 VEGFBP49765 207 aa9.72□□□□□ -0.85
RAB3C-204ENST00000513316 SAMD5Q5TGI4 173 aa9.72□□□□□ -0.85
RAB3C-204ENST00000513316 FOXR1Q6PIV2 292 aa9.72□□□□□ -0.85
RAB3C-204ENST00000513316 NFX1Q12986 1120 aaKnown RBP9.71□□□□□ -0.86
RAB3C-204ENST00000513316 C11orf91Q3C1V1 193 aa9.71□□□□□ -0.86
RAB3C-204ENST00000513316 VWA5B2Q8N398 1253 aa9.71□□□□□ -0.86
RAB3C-204ENST00000513316 IRF7Q92985 503 aa9.71□□□□□ -0.86
RAB3C-204ENST00000513316 THBS1P07996 1170 aa9.7□□□□□ -0.86
RAB3C-204ENST00000513316 UBAP2LQ14157 1087 aaKnown RBP9.7□□□□□ -0.86
RAB3C-204ENST00000513316 COX20Q5RI15 118 aa9.7□□□□□ -0.86
RAB3C-204ENST00000513316 IER5Q5VY09 327 aa9.7□□□□□ -0.86
RAB3C-204ENST00000513316 ZNF775Q96BV0 537 aaPredicted RBP9.7□□□□□ -0.86
RAB3C-204ENST00000513316 SUSD3Q96L08 255 aa9.7□□□□□ -0.86
RAB3C-204ENST00000513316 TRERF1Q96PN7 1200 aa9.7□□□□□ -0.86
RAB3C-204ENST00000513316 ZCCHC2Q9C0B9 1178 aaKnown RBP9.7□□□□□ -0.86
RAB3C-204ENST00000513316 PHF24Q9UPV7 400 aa9.7□□□□□ -0.86
RAB3C-204ENST00000513316 PATL2C9JE40 543 aaKnown RBP9.69□□□□□ -0.86
RAB3C-204ENST00000513316 TGFBR3LH3BV60 316 aa9.69□□□□□ -0.86
RAB3C-204ENST00000513316 DGKZQ13574 1117 aa9.69□□□□□ -0.86
RAB3C-204ENST00000513316 CAPN12Q6ZSI9 719 aa9.69□□□□□ -0.86
RAB3C-204ENST00000513316 SEPT3Q9UH03 358 aa9.69□□□□□ -0.86
RAB3C-204ENST00000513316 LRFN2Q9ULH4 789 aa9.69□□□□□ -0.86
RAB3C-204ENST00000513316 PCDHGC4Q9Y5F7 938 aa9.69□□□□□ -0.86
RAB3C-204ENST00000513316 FAM157BP0CG42 384 aa9.68□□□□□ -0.86
RAB3C-204ENST00000513316 NAA30Q147X3 362 aaPredicted RBP9.68□□□□□ -0.86
RAB3C-204ENST00000513316 LRRC69Q6ZNQ3 347 aa9.68□□□□□ -0.86
RAB3C-204ENST00000513316 CCER1Q8TC90 406 aaPredicted RBP9.68□□□□□ -0.86
RAB3C-204ENST00000513316 GTPBP3Q969Y2 492 aaKnown RBP9.68□□□□□ -0.86
RAB3C-204ENST00000513316 CFHR5Q9BXR6 569 aa9.68□□□□□ -0.86
RAB3C-204ENST00000513316 ATXN7O15265 892 aaPredicted RBP9.67□□□□□ -0.86
RAB3C-204ENST00000513316 WFS1O76024 890 aa9.67□□□□□ -0.86
RAB3C-204ENST00000513316 BRD2P25440 801 aaKnown RBP9.67□□□□□ -0.86
RAB3C-204ENST00000513316 KCNA1Q09470 495 aa9.67□□□□□ -0.86
RAB3C-204ENST00000513316 TXNDC2Q86VQ3 553 aa9.67□□□□□ -0.86
RAB3C-204ENST00000513316 HELQQ8TDG4 1101 aa9.67□□□□□ -0.86
RAB3C-204ENST00000513316 SAP130Q9H0E3 1048 aa9.67□□□□□ -0.86
RAB3C-204ENST00000513316 NDFIP2Q9NV92 336 aa9.67□□□□□ -0.86
RAB3C-204ENST00000513316 ATXN7L1Q9ULK2 861 aaPredicted RBP9.67□□□□□ -0.86
RAB3C-204ENST00000513316 CC2D2AQ9P2K1 1620 aa9.67□□□□□ -0.86
RAB3C-204ENST00000513316 SCNN1AP37088 669 aa9.66□□□□□ -0.86
RAB3C-204ENST00000513316 GTF3C2Q8WUA4 911 aaPredicted RBP9.66□□□□□ -0.86
RAB3C-204ENST00000513316 HSH2DQ96JZ2 352 aa9.66□□□□□ -0.86
RAB3C-204ENST00000513316 KLK14Q9P0G3 267 aa9.66□□□□□ -0.86
RAB3C-204ENST00000513316 EGFL7Q9UHF1 273 aa9.66□□□□□ -0.86
RAB3C-204ENST00000513316 ERBB4Q15303 1308 aa9.65□□□□□ -0.86
RAB3C-204ENST00000513316 LAMC2Q13753 1193 aa9.65□□□□□ -0.86
RAB3C-204ENST00000513316 TREML4Q6UXN2 200 aa9.65□□□□□ -0.86
RAB3C-204ENST00000513316 KCTD17Q8N5Z5 321 aa9.65□□□□□ -0.86
RAB3C-204ENST00000513316 ABTB2Q8N961 1025 aa9.65□□□□□ -0.86
RAB3C-204ENST00000513316 ZNF280CQ8ND82 737 aa9.65□□□□□ -0.86
RAB3C-204ENST00000513316 KLRG1Q96E93 195 aa9.65□□□□□ -0.86
RAB3C-204ENST00000513316 IFT43Q96FT9 208 aa9.65□□□□□ -0.86
RAB3C-204ENST00000513316 STIM2Q9P246 746 aa9.65□□□□□ -0.86
RAB3C-204ENST00000513316 GNEQ9Y223 722 aaKnown RBP9.65□□□□□ -0.86
RAB3C-204ENST00000513316 BCS1LQ9Y276 419 aa9.65□□□□□ -0.86
RAB3C-204ENST00000513316 CECR2Q9BXF3 1484 aa9.65□□□□□ -0.87
RAB3C-204ENST00000513316 TNFRSF10BO14763 440 aa9.64□□□□□ -0.87
RAB3C-204ENST00000513316 BNIP3LO60238 219 aa9.64□□□□□ -0.87
RAB3C-204ENST00000513316 SF3B2Q13435 895 aaKnown RBP9.64□□□□□ -0.87
RAB3C-204ENST00000513316 BTLAQ7Z6A9 289 aa9.64□□□□□ -0.87
RAB3C-204ENST00000513316 DMGDHQ9UI17 866 aaKnown RBP9.64□□□□□ -0.87
RAB3C-204ENST00000513316 TNP2Q05952 138 aa9.63□□□□□ -0.87
RAB3C-204ENST00000513316 TYRO3Q06418 890 aa9.63□□□□□ -0.87
RAB3C-204ENST00000513316 GPR161Q8N6U8 529 aaKnown RBP9.63□□□□□ -0.87
RAB3C-204ENST00000513316 CEP63Q96MT8 703 aa9.63□□□□□ -0.87
RAB3C-204ENST00000513316 GPR25O00155 361 aa9.62□□□□□ -0.87
RAB3C-204ENST00000513316 KHNYNO15037 678 aaKnown RBP9.62□□□□□ -0.87
RAB3C-204ENST00000513316 EFSO43281 561 aa9.62□□□□□ -0.87
RAB3C-204ENST00000513316 MAPTP10636 758 aaKnown RBP9.62□□□□□ -0.87
RAB3C-204ENST00000513316 DNMT3AQ9Y6K1 912 aaPredicted RBP9.62□□□□□ -0.87
RAB3C-204ENST00000513316 DCDC2BA2VCK2 349 aa9.61□□□□□ -0.87
RAB3C-204ENST00000513316 MICAL2O94851 1124 aa9.61□□□□□ -0.87
RAB3C-204ENST00000513316 ABL1P00519 1130 aa9.61□□□□□ -0.87
RAB3C-204ENST00000513316 EPB42P16452 691 aa9.61□□□□□ -0.87
RAB3C-204ENST00000513316 KCNQ4P56696 695 aa9.61□□□□□ -0.87
RAB3C-204ENST00000513316 FKBP4Q02790 459 aaKnown RBP eCLIP9.61□□□□□ -0.87
RAB3C-204ENST00000513316 FAM182BQ5T319 152 aa9.61□□□□□ -0.87
RAB3C-204ENST00000513316 TREML1Q86YW5 311 aa9.61□□□□□ -0.87
RAB3C-204ENST00000513316 ABHD17AQ96GS6 310 aa9.61□□□□□ -0.87
RAB3C-204ENST00000513316 BRD7Q9NPI1 651 aa9.61□□□□□ -0.87
RAB3C-204ENST00000513316 NPR3P17342 541 aa9.6□□□□□ -0.87
RAB3C-204ENST00000513316 FGFR3P22607 806 aa9.6□□□□□ -0.87
RAB3C-204ENST00000513316 IDH3AP50213 366 aa9.6□□□□□ -0.87
RAB3C-204ENST00000513316 ARSDP51689 593 aa9.6□□□□□ -0.87
RAB3C-204ENST00000513316 LCE2AQ5TA79 106 aaPredicted RBP9.6□□□□□ -0.87
RAB3C-204ENST00000513316 ETFBKMTQ8IXQ9 262 aa9.6□□□□□ -0.87
RAB3C-204ENST00000513316 COL25A1Q9BXS0 654 aaPredicted RBP9.6□□□□□ -0.87
RAB3C-204ENST00000513316 C11orf16Q9NQ32 467 aa9.6□□□□□ -0.87
RAB3C-204ENST00000513316 FAM13BQ9NYF5 915 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms