RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 CHRNA5P30532 468 aa23.1■■□□□ 1.29
DDR1-272ENST00000513243 PROSER3Q2NL68 480 aa23.1■■□□□ 1.29
DDR1-272ENST00000513243 LRP10Q7Z4F1 713 aa23.1■■□□□ 1.29
DDR1-272ENST00000513243 FAM9BQ8IZU0 186 aa23.1■■□□□ 1.29
DDR1-272ENST00000513243 ANXA1P04083 346 aa23.09■■□□□ 1.29
DDR1-272ENST00000513243 PRR5LQ6MZQ0 368 aa23.09■■□□□ 1.29
DDR1-272ENST00000513243 WWC1Q8IX03 1113 aa23.09■■□□□ 1.29
DDR1-272ENST00000513243 UTRNP46939 3433 aa23.09■■□□□ 1.29
DDR1-272ENST00000513243 MAP3K15Q6ZN16 1313 aa23.08■■□□□ 1.29
DDR1-272ENST00000513243 ERVV-1B6SEH8 477 aa23.08■■□□□ 1.29
DDR1-272ENST00000513243 NCBP3Q53F19 620 aaKnown RBP23.08■■□□□ 1.29
DDR1-272ENST00000513243 DUSP27Q5VZP5 1158 aa23.08■■□□□ 1.29
DDR1-272ENST00000513243 CCDC24Q8N4L8 307 aa23.08■■□□□ 1.29
DDR1-272ENST00000513243 BCS1LQ9Y276 419 aa23.08■■□□□ 1.29
DDR1-272ENST00000513243 HOXB7P09629 217 aa23.07■■□□□ 1.28
DDR1-272ENST00000513243 KIF6Q6ZMV9 814 aa23.07■■□□□ 1.28
DDR1-272ENST00000513243 PIM2Q9P1W9 311 aa23.07■■□□□ 1.28
DDR1-272ENST00000513243 NIP7Q9Y221 180 aaKnown RBP eCLIP23.07■■□□□ 1.28
DDR1-272ENST00000513243 CNBD1Q8NA66 436 aa23.06■■□□□ 1.28
DDR1-272ENST00000513243 CHD4Q14839 1912 aa23.06■■□□□ 1.28
DDR1-272ENST00000513243 HDGFL1Q5TGJ6 251 aa23.05■■□□□ 1.28
DDR1-272ENST00000513243 BRIP1Q9BX63 1249 aa23.05■■□□□ 1.28
DDR1-272ENST00000513243 ZBTB3Q9H5J0 574 aa23.05■■□□□ 1.28
DDR1-272ENST00000513243 DDX21Q9NR30 783 aaKnown RBP eCLIP23.05■■□□□ 1.28
DDR1-272ENST00000513243 NBPF5PQ86XG9 351 aaPredicted RBP23.04■■□□□ 1.28
DDR1-272ENST00000513243 CHPF2Q9P2E5 772 aa23.04■■□□□ 1.28
DDR1-272ENST00000513243 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
DDR1-272ENST00000513243 BRCA1P38398 1863 aaKnown RBP23.04■■□□□ 1.28
DDR1-272ENST00000513243 ELL2O00472 640 aaPredicted RBP23.03■■□□□ 1.28
DDR1-272ENST00000513243 NPHP1O15259 732 aa23.03■■□□□ 1.28
DDR1-272ENST00000513243 COPS6Q7L5N1 327 aa23.03■■□□□ 1.28
DDR1-272ENST00000513243 C2CD5Q86YS7 1000 aa23.03■■□□□ 1.28
DDR1-272ENST00000513243 C8orf58Q8NAV2 365 aa23.03■■□□□ 1.28
DDR1-272ENST00000513243 DALRD3Q5D0E6 543 aaKnown RBP23.02■■□□□ 1.28
DDR1-272ENST00000513243 XAGE3Q8WTP9 111 aa23.02■■□□□ 1.28
DDR1-272ENST00000513243 TSR2Q969E8 191 aaKnown RBP23.02■■□□□ 1.28
DDR1-272ENST00000513243 FAM177BA6PVY3 158 aa23.01■■□□□ 1.27
DDR1-272ENST00000513243 H0YIN7 160 aa23.01■■□□□ 1.27
DDR1-272ENST00000513243 PDE6BP35913 854 aa23.01■■□□□ 1.27
DDR1-272ENST00000513243 ST5P78524 1137 aa23.01■■□□□ 1.27
DDR1-272ENST00000513243 AIMP1Q12904 312 aaKnown RBP23.01■■□□□ 1.27
DDR1-272ENST00000513243 GIGYF2Q6Y7W6 1299 aaKnown RBP23.01■■□□□ 1.27
DDR1-272ENST00000513243 ANKRD31Q8N7Z5 1873 aa23■■□□□ 1.27
DDR1-272ENST00000513243 ATP10DQ9P241 1426 aa23■■□□□ 1.27
DDR1-272ENST00000513243 TPTE2Q6XPS3 522 aa23■■□□□ 1.27
DDR1-272ENST00000513243 DBF4Q9UBU7 674 aaPredicted RBP23■■□□□ 1.27
DDR1-272ENST00000513243 NUP98P52948 1817 aa23■■□□□ 1.27
DDR1-272ENST00000513243 IL16Q14005 1332 aa23■■□□□ 1.27
DDR1-272ENST00000513243 GPTP24298 496 aa22.99■■□□□ 1.27
DDR1-272ENST00000513243 ZNF34Q8IZ26 560 aa22.99■■□□□ 1.27
DDR1-272ENST00000513243 WDR63Q8IWG1 891 aa22.98■■□□□ 1.27
DDR1-272ENST00000513243 TSPYL6Q8N831 410 aa22.98■■□□□ 1.27
DDR1-272ENST00000513243 PDZRN3Q9UPQ7 1066 aa22.98■■□□□ 1.27
DDR1-272ENST00000513243 UBN2Q6ZU65 1347 aa22.98■■□□□ 1.27
DDR1-272ENST00000513243 ARHGAP27Q6ZUM4 889 aa22.97■■□□□ 1.27
DDR1-272ENST00000513243 TTLL6Q8N841 843 aa22.97■■□□□ 1.27
DDR1-272ENST00000513243 SUSD4Q5VX71 490 aa22.96■■□□□ 1.27
DDR1-272ENST00000513243 ZNF784Q8NCA9 323 aaPredicted RBP22.96■■□□□ 1.27
DDR1-272ENST00000513243 HYPKQ9NX55 129 aa22.96■■□□□ 1.27
DDR1-272ENST00000513243 DLEC1Q9Y238 1755 aa22.96■■□□□ 1.27
DDR1-272ENST00000513243 ZNF622Q969S3 477 aaKnown RBP eCLIP22.95■■□□□ 1.26
DDR1-272ENST00000513243 NYXQ9GZU5 481 aa22.95■■□□□ 1.26
DDR1-272ENST00000513243 ARFGEF1Q9Y6D6 1849 aa22.94■■□□□ 1.26
DDR1-272ENST00000513243 CCER2I3L3R5 266 aa22.94■■□□□ 1.26
DDR1-272ENST00000513243 SRGNP10124 158 aa22.94■■□□□ 1.26
DDR1-272ENST00000513243 GTF2E1P29083 439 aaPredicted RBP22.94■■□□□ 1.26
DDR1-272ENST00000513243 NUTM1Q86Y26 1132 aa22.94■■□□□ 1.26
DDR1-272ENST00000513243 KLRG2A4D1S0 409 aaPredicted RBP22.93■■□□□ 1.26
DDR1-272ENST00000513243 COL11A2P13942 1736 aaPredicted RBP22.93■■□□□ 1.26
DDR1-272ENST00000513243 FANCIQ9NVI1 1328 aa22.92■■□□□ 1.26
DDR1-272ENST00000513243 TCIRG1Q13488 830 aa22.92■■□□□ 1.26
DDR1-272ENST00000513243 ERFEQ4G0M1 354 aa22.92■■□□□ 1.26
DDR1-272ENST00000513243 PARP10Q53GL7 1025 aa22.92■■□□□ 1.26
DDR1-272ENST00000513243 CCDC30Q5VVM6 783 aa22.92■■□□□ 1.26
DDR1-272ENST00000513243 STYK1Q6J9G0 422 aa22.92■■□□□ 1.26
DDR1-272ENST00000513243 ANKRD13DQ6ZTN6 518 aa22.92■■□□□ 1.26
DDR1-272ENST00000513243 PLBD2Q8NHP8 589 aa22.92■■□□□ 1.26
DDR1-272ENST00000513243 SPINK5Q9NQ38 1064 aaPredicted RBP22.92■■□□□ 1.26
DDR1-272ENST00000513243 ABCC12Q96J65 1359 aa22.91■■□□□ 1.26
DDR1-272ENST00000513243 IBTKQ9P2D0 1353 aaPredicted RBP22.91■■□□□ 1.26
DDR1-272ENST00000513243 NTSR2O95665 410 aa22.91■■□□□ 1.26
DDR1-272ENST00000513243 HSP90AB3PQ58FF7 597 aa22.91■■□□□ 1.26
DDR1-272ENST00000513243 MASTLQ96GX5 879 aa22.91■■□□□ 1.26
DDR1-272ENST00000513243 PHAXQ9H814 394 aaKnown RBP22.91■■□□□ 1.26
DDR1-272ENST00000513243 TWISTNBQ3B726 338 aaPredicted RBP22.9■■□□□ 1.26
DDR1-272ENST00000513243 PPP1R42Q7Z4L9 355 aa22.9■■□□□ 1.26
DDR1-272ENST00000513243 CHMP4AQ9BY43 222 aa22.9■■□□□ 1.26
DDR1-272ENST00000513243 NLRP10Q86W26 655 aa22.89■■□□□ 1.25
DDR1-272ENST00000513243 CNKSR1Q969H4 720 aa22.89■■□□□ 1.25
DDR1-272ENST00000513243 UTP14AQ9BVJ6 771 aaKnown RBP22.89■■□□□ 1.25
DDR1-272ENST00000513243 ZNF521Q96K83 1311 aa22.88■■□□□ 1.25
DDR1-272ENST00000513243 NPR1P16066 1061 aa22.88■■□□□ 1.25
DDR1-272ENST00000513243 ADCY9O60503 1353 aa22.88■■□□□ 1.25
DDR1-272ENST00000513243 TCERG1O14776 1098 aaKnown RBP22.87■■□□□ 1.25
DDR1-272ENST00000513243 GOLGA2Q08379 1002 aa22.87■■□□□ 1.25
DDR1-272ENST00000513243 DIEXFQ68CQ4 756 aaKnown RBP22.87■■□□□ 1.25
DDR1-272ENST00000513243 PRPF40BQ6NWY9 871 aaKnown RBP22.87■■□□□ 1.25
DDR1-272ENST00000513243 C21orf2O43822 256 aa22.86■■□□□ 1.25
DDR1-272ENST00000513243 EXOSC9Q06265 439 aaKnown RBP22.86■■□□□ 1.25
DDR1-272ENST00000513243 CRY2Q49AN0 593 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms