RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 KAT6BQ8WYB5 2073 aa9.57□□□□□ -0.88
COPS4-209ENST00000511653 MYOM1P52179 1685 aa9.57□□□□□ -0.88
COPS4-209ENST00000511653 LTN1O94822 1766 aa9.56□□□□□ -0.88
COPS4-209ENST00000511653 ANKRD13DQ6ZTN6 518 aa9.56□□□□□ -0.88
COPS4-209ENST00000511653 MRPL50Q8N5N7 158 aaKnown RBP9.56□□□□□ -0.88
COPS4-209ENST00000511653 MTMR14Q8NCE2 650 aa9.56□□□□□ -0.88
COPS4-209ENST00000511653 SYMPKQ92797 1274 aaKnown RBP9.56□□□□□ -0.88
COPS4-209ENST00000511653 USP54Q70EL1 1684 aa9.55□□□□□ -0.88
COPS4-209ENST00000511653 GJA5P36382 358 aa9.55□□□□□ -0.88
COPS4-209ENST00000511653 SLF2Q8IX21 1173 aa9.55□□□□□ -0.88
COPS4-209ENST00000511653 SPDYE5A6NIY4 337 aa9.55□□□□□ -0.88
COPS4-209ENST00000511653 USP46P62068 366 aa9.55□□□□□ -0.88
COPS4-209ENST00000511653 NBPF14Q5TI25 921 aa9.55□□□□□ -0.88
COPS4-209ENST00000511653 TOM1L2Q6ZVM7 507 aa9.55□□□□□ -0.88
COPS4-209ENST00000511653 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
COPS4-209ENST00000511653 COG6Q9Y2V7 657 aa9.55□□□□□ -0.88
COPS4-209ENST00000511653 WDR17Q8IZU2 1322 aa9.54□□□□□ -0.88
COPS4-209ENST00000511653 A6NJR5 290 aa9.54□□□□□ -0.88
COPS4-209ENST00000511653 AP1G2O75843 785 aa9.54□□□□□ -0.88
COPS4-209ENST00000511653 DDB1Q16531 1140 aa9.54□□□□□ -0.88
COPS4-209ENST00000511653 PUS10Q3MIT2 529 aaKnown RBP9.54□□□□□ -0.88
COPS4-209ENST00000511653 MARCH10Q8NA82 808 aaPredicted RBP9.54□□□□□ -0.88
COPS4-209ENST00000511653 PDGFDQ9GZP0 370 aaPredicted RBP9.54□□□□□ -0.88
COPS4-209ENST00000511653 NHSQ6T4R5 1651 aa9.54□□□□□ -0.88
COPS4-209ENST00000511653 BCAMP50895 628 aa9.53□□□□□ -0.88
COPS4-209ENST00000511653 BANK1Q8NDB2 785 aa9.53□□□□□ -0.88
COPS4-209ENST00000511653 TTC21BQ7Z4L5 1316 aa9.53□□□□□ -0.88
COPS4-209ENST00000511653 BTAF1O14981 1849 aa9.52□□□□□ -0.88
COPS4-209ENST00000511653 KCNQ2O43526 872 aa9.52□□□□□ -0.89
COPS4-209ENST00000511653 TRAK2O60296 914 aa9.52□□□□□ -0.89
COPS4-209ENST00000511653 TMEM259Q4ZIN3 620 aa9.52□□□□□ -0.89
COPS4-209ENST00000511653 ARHGEF25Q86VW2 580 aa9.52□□□□□ -0.89
COPS4-209ENST00000511653 SIN3AQ96ST3 1273 aa9.52□□□□□ -0.89
COPS4-209ENST00000511653 KRTAP3-3Q9BYR6 98 aa9.52□□□□□ -0.89
COPS4-209ENST00000511653 KRTAP3-2Q9BYR7 98 aa9.52□□□□□ -0.89
COPS4-209ENST00000511653 SPON1Q9HCB6 807 aa9.52□□□□□ -0.89
COPS4-209ENST00000511653 EVC2Q86UK5 1308 aa9.52□□□□□ -0.89
COPS4-209ENST00000511653 ABCC6O95255 1503 aa9.52□□□□□ -0.89
COPS4-209ENST00000511653 CFAP99D6REC4 459 aa9.51□□□□□ -0.89
COPS4-209ENST00000511653 PLSCR1O15162 318 aa9.51□□□□□ -0.89
COPS4-209ENST00000511653 PRPF38BQ5VTL8 546 aaKnown RBP9.51□□□□□ -0.89
COPS4-209ENST00000511653 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
COPS4-209ENST00000511653 ROCK2O75116 1388 aaKnown RBP9.51□□□□□ -0.89
COPS4-209ENST00000511653 NINLQ9Y2I6 1382 aa9.51□□□□□ -0.89
COPS4-209ENST00000511653 BCL9O00512 1426 aa9.51□□□□□ -0.89
COPS4-209ENST00000511653 TNS2Q63HR2 1409 aa9.51□□□□□ -0.89
COPS4-209ENST00000511653 CD163L1Q9NR16 1453 aa9.51□□□□□ -0.89
COPS4-209ENST00000511653 PAPPAQ13219 1627 aa9.51□□□□□ -0.89
COPS4-209ENST00000511653 CTDSPL2Q05D32 466 aa9.51□□□□□ -0.89
COPS4-209ENST00000511653 LRCH3Q96II8 777 aa9.51□□□□□ -0.89
COPS4-209ENST00000511653 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.51□□□□□ -0.89
COPS4-209ENST00000511653 PPP1R1BQ9UD71 204 aaPredicted RBP9.51□□□□□ -0.89
COPS4-209ENST00000511653 CEP350Q5VT06 3117 aa9.5□□□□□ -0.89
COPS4-209ENST00000511653 KTN1Q86UP2 1357 aaKnown RBP9.5□□□□□ -0.89
COPS4-209ENST00000511653 C11orf95C9JLR9 678 aaPredicted RBP9.5□□□□□ -0.89
COPS4-209ENST00000511653 APBB1O00213 710 aa9.5□□□□□ -0.89
COPS4-209ENST00000511653 USP17L8P0C7I0 530 aa9.5□□□□□ -0.89
COPS4-209ENST00000511653 YY1P25490 414 aa9.5□□□□□ -0.89
COPS4-209ENST00000511653 ARID3AQ99856 593 aa9.5□□□□□ -0.89
COPS4-209ENST00000511653 CARD10Q9BWT7 1032 aa9.5□□□□□ -0.89
COPS4-209ENST00000511653 HMX1Q9NP08 348 aaPredicted RBP9.5□□□□□ -0.89
COPS4-209ENST00000511653 CHD4Q14839 1912 aa9.49□□□□□ -0.89
COPS4-209ENST00000511653 TTC21AQ8NDW8 1320 aa9.49□□□□□ -0.89
COPS4-209ENST00000511653 TUBGCP6Q96RT7 1819 aa9.49□□□□□ -0.89
COPS4-209ENST00000511653 ZBTB7AO95365 584 aa9.49□□□□□ -0.89
COPS4-209ENST00000511653 CSB-PGBD3P0DP91 1061 aa9.49□□□□□ -0.89
COPS4-209ENST00000511653 ATP6V1AP38606 617 aa9.49□□□□□ -0.89
COPS4-209ENST00000511653 APLP1P51693 650 aa9.48□□□□□ -0.89
COPS4-209ENST00000511653 MTMR2Q13614 643 aa9.48□□□□□ -0.89
COPS4-209ENST00000511653 MORN1Q5T089 497 aa9.48□□□□□ -0.89
COPS4-209ENST00000511653 KCNH5Q8NCM2 988 aa9.48□□□□□ -0.89
COPS4-209ENST00000511653 GDPD2Q9HCC8 539 aa9.48□□□□□ -0.89
COPS4-209ENST00000511653 SLC27A5Q9Y2P5 690 aa9.48□□□□□ -0.89
COPS4-209ENST00000511653 RGPD2P0DJD1 1756 aa9.48□□□□□ -0.89
COPS4-209ENST00000511653 CCDC7Q96M83 1385 aa9.48□□□□□ -0.89
COPS4-209ENST00000511653 TXNRD1Q16881 649 aa9.48□□□□□ -0.89
COPS4-209ENST00000511653 LRRN4Q8WUT4 740 aa9.48□□□□□ -0.89
COPS4-209ENST00000511653 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
COPS4-209ENST00000511653 TBC1D2BQ9UPU7 963 aa9.48□□□□□ -0.89
COPS4-209ENST00000511653 SHANK3Q9BYB0 1731 aa9.47□□□□□ -0.89
COPS4-209ENST00000511653 SBNO2Q9Y2G9 1366 aa9.47□□□□□ -0.89
COPS4-209ENST00000511653 SOWAHBA6NEL2 793 aa9.47□□□□□ -0.89
COPS4-209ENST00000511653 C6orf229H3BNL8 230 aa9.47□□□□□ -0.89
COPS4-209ENST00000511653 ACTN4O43707 911 aaKnown RBP9.47□□□□□ -0.89
COPS4-209ENST00000511653 NEUROD1Q13562 356 aa9.47□□□□□ -0.89
COPS4-209ENST00000511653 NME9Q86XW9 330 aa9.47□□□□□ -0.89
COPS4-209ENST00000511653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.47□□□□□ -0.89
COPS4-209ENST00000511653 HPS5Q9UPZ3 1129 aa9.47□□□□□ -0.89
COPS4-209ENST00000511653 FAM208AQ9UK61 1670 aaKnown RBP9.47□□□□□ -0.89
COPS4-209ENST00000511653 USP31Q70CQ4 1352 aa9.47□□□□□ -0.89
COPS4-209ENST00000511653 DOT1LQ8TEK3 1739 aa9.46□□□□□ -0.89
COPS4-209ENST00000511653 QSER1Q2KHR3 1735 aa9.46□□□□□ -0.9
COPS4-209ENST00000511653 EXOC5O00471 708 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 GPR37L1O60883 481 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 BLOC1S3Q6QNY0 202 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 RNF19BQ6ZMZ0 732 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 EPS8L1Q8TE68 723 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 TSC1Q92574 1164 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 ACSBG1Q96GR2 724 aa9.45□□□□□ -0.9
COPS4-209ENST00000511653 PER1O15534 1290 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms