RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 NBPF15Q8N660 670 aa11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 TSPYL6Q8N831 410 aa11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 CFAP44Q96MT7 982 aa11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 SCN7AQ01118 1682 aa11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 CARMIL3Q8ND23 1372 aa11.39□□□□□ -0.59
PDLIM5-213ENST00000509357 FAM177BA6PVY3 158 aa11.38□□□□□ -0.59
PDLIM5-213ENST00000509357 KCNA3P22001 575 aa11.38□□□□□ -0.59
PDLIM5-213ENST00000509357 ST5P78524 1137 aa11.38□□□□□ -0.59
PDLIM5-213ENST00000509357 KIF6Q6ZMV9 814 aa11.38□□□□□ -0.59
PDLIM5-213ENST00000509357 LRP10Q7Z4F1 713 aa11.38□□□□□ -0.59
PDLIM5-213ENST00000509357 CNBD1Q8NA66 436 aa11.38□□□□□ -0.59
PDLIM5-213ENST00000509357 C8orf58Q8NAV2 365 aa11.38□□□□□ -0.59
PDLIM5-213ENST00000509357 ZNF526Q8TF50 670 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-213ENST00000509357 IFT57Q9NWB7 429 aa11.38□□□□□ -0.59
PDLIM5-213ENST00000509357 BABAM1Q9NWV8 329 aa11.38□□□□□ -0.59
PDLIM5-213ENST00000509357 FANCIQ9NVI1 1328 aa11.37□□□□□ -0.59
PDLIM5-213ENST00000509357 GTF2E1P29083 439 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-213ENST00000509357 PDE6BP35913 854 aa11.37□□□□□ -0.59
PDLIM5-213ENST00000509357 CLEC4GQ6UXB4 293 aa11.37□□□□□ -0.59
PDLIM5-213ENST00000509357 NBPF5PQ86XG9 351 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-213ENST00000509357 ZNF622Q969S3 477 aaKnown RBP eCLIP11.37□□□□□ -0.59
PDLIM5-213ENST00000509357 NIP7Q9Y221 180 aaKnown RBP eCLIP11.37□□□□□ -0.59
PDLIM5-213ENST00000509357 PDIA6Q15084 440 aa11.36□□□□□ -0.59
PDLIM5-213ENST00000509357 PROSER3Q2NL68 480 aa11.36□□□□□ -0.59
PDLIM5-213ENST00000509357 PRR5LQ6MZQ0 368 aa11.36□□□□□ -0.59
PDLIM5-213ENST00000509357 TTLL6Q8N841 843 aa11.36□□□□□ -0.59
PDLIM5-213ENST00000509357 NECTIN2Q92692 538 aa11.36□□□□□ -0.59
PDLIM5-213ENST00000509357 BRIP1Q9BX63 1249 aa11.36□□□□□ -0.59
PDLIM5-213ENST00000509357 GPBP1L1Q9HC44 474 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-213ENST00000509357 IL16Q14005 1332 aa11.35□□□□□ -0.59
PDLIM5-213ENST00000509357 CHD4Q14839 1912 aa11.35□□□□□ -0.59
PDLIM5-213ENST00000509357 ANXA1P04083 346 aa11.35□□□□□ -0.59
PDLIM5-213ENST00000509357 TPTE2Q6XPS3 522 aa11.35□□□□□ -0.59
PDLIM5-213ENST00000509357 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
PDLIM5-213ENST00000509357 TRMT2AQ8IZ69 625 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-213ENST00000509357 PDZRN3Q9UPQ7 1066 aa11.35□□□□□ -0.59
PDLIM5-213ENST00000509357 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
PDLIM5-213ENST00000509357 N4BP2Q86UW6 1770 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-213ENST00000509357 CALD1Q05682 793 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-213ENST00000509357 HLFQ16534 295 aa11.34□□□□□ -0.59
PDLIM5-213ENST00000509357 ZBTB3Q9H5J0 574 aa11.34□□□□□ -0.59
PDLIM5-213ENST00000509357 ZNF219Q9P2Y4 722 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-213ENST00000509357 NUP98P52948 1817 aa11.34□□□□□ -0.59
PDLIM5-213ENST00000509357 AFDNP55196 1824 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-213ENST00000509357 KIAA1551Q9HCM1 1747 aa11.33□□□□□ -0.6
PDLIM5-213ENST00000509357 ERVV-1B6SEH8 477 aa11.33□□□□□ -0.6
PDLIM5-213ENST00000509357 ELL2O00472 640 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-213ENST00000509357 GNAI1P63096 354 aa11.33□□□□□ -0.6
PDLIM5-213ENST00000509357 SLFN5Q08AF3 891 aa11.33□□□□□ -0.6
PDLIM5-213ENST00000509357 C9orf131Q5VYM1 1079 aa11.33□□□□□ -0.6
PDLIM5-213ENST00000509357 TTLL7Q6ZT98 887 aa11.33□□□□□ -0.6
PDLIM5-213ENST00000509357 ERBB4Q15303 1308 aa11.33□□□□□ -0.6
PDLIM5-213ENST00000509357 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
PDLIM5-213ENST00000509357 ARFGEF2Q9Y6D5 1785 aa11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 RGL2O15211 777 aa11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 GPTP24298 496 aa11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 EXOSC9Q06265 439 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 DUSP27Q5VZP5 1158 aa11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 CNKSR1Q969H4 720 aa11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 NYXQ9GZU5 481 aa11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 RNF181Q9P0P0 153 aa11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 KIF13BQ9NQT8 1826 aa11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 NRXN2Q9P2S2 1712 aa11.32□□□□□ -0.6
PDLIM5-213ENST00000509357 ANKRD36CQ5JPF3 1778 aa11.31□□□□□ -0.6
PDLIM5-213ENST00000509357 HDGFL1Q5TGJ6 251 aa11.31□□□□□ -0.6
PDLIM5-213ENST00000509357 MASTLQ96GX5 879 aa11.31□□□□□ -0.6
PDLIM5-213ENST00000509357 TCERG1O14776 1098 aaKnown RBP11.3□□□□□ -0.6
PDLIM5-213ENST00000509357 C21orf2O43822 256 aa11.3□□□□□ -0.6
PDLIM5-213ENST00000509357 VAMP4O75379 141 aa11.3□□□□□ -0.6
PDLIM5-213ENST00000509357 C1QTNF8P60827 252 aa11.3□□□□□ -0.6
PDLIM5-213ENST00000509357 STYK1Q6J9G0 422 aa11.3□□□□□ -0.6
PDLIM5-213ENST00000509357 COPS6Q7L5N1 327 aa11.3□□□□□ -0.6
PDLIM5-213ENST00000509357 XAGE3Q8WTP9 111 aa11.3□□□□□ -0.6
PDLIM5-213ENST00000509357 SRGNP10124 158 aa11.29□□□□□ -0.6
PDLIM5-213ENST00000509357 RASSF7Q02833 373 aa11.29□□□□□ -0.6
PDLIM5-213ENST00000509357 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
PDLIM5-213ENST00000509357 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-213ENST00000509357 PPP1R42Q7Z4L9 355 aa11.29□□□□□ -0.6
PDLIM5-213ENST00000509357 NUTM1Q86Y26 1132 aa11.29□□□□□ -0.6
PDLIM5-213ENST00000509357 DDX21Q9NR30 783 aaKnown RBP eCLIP11.29□□□□□ -0.6
PDLIM5-213ENST00000509357 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
PDLIM5-213ENST00000509357 ANKRD31Q8N7Z5 1873 aa11.29□□□□□ -0.6
PDLIM5-213ENST00000509357 ZBED9Q6R2W3 1325 aa11.29□□□□□ -0.6
PDLIM5-213ENST00000509357 ADCY9O60503 1353 aa11.28□□□□□ -0.6
PDLIM5-213ENST00000509357 HOXB7P09629 217 aa11.28□□□□□ -0.6
PDLIM5-213ENST00000509357 NPR1P16066 1061 aa11.28□□□□□ -0.6
PDLIM5-213ENST00000509357 LMNB1P20700 586 aa11.28□□□□□ -0.6
PDLIM5-213ENST00000509357 ERFEQ4G0M1 354 aa11.28□□□□□ -0.6
PDLIM5-213ENST00000509357 HSP90AB3PQ58FF7 597 aa11.28□□□□□ -0.6
PDLIM5-213ENST00000509357 SUSD4Q5VX71 490 aa11.28□□□□□ -0.6
PDLIM5-213ENST00000509357 PRPF40BQ6NWY9 871 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-213ENST00000509357 G2E3Q7L622 706 aa11.28□□□□□ -0.6
PDLIM5-213ENST00000509357 DBF4Q9UBU7 674 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-213ENST00000509357 CACNA1FO60840 1977 aa11.28□□□□□ -0.6
PDLIM5-213ENST00000509357 TWISTNBQ3B726 338 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-213ENST00000509357 PARP10Q53GL7 1025 aa11.27□□□□□ -0.61
PDLIM5-213ENST00000509357 SOGA3Q5TF21 947 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms