RNA–Protein interactions for RNA: ENST00000507902.5

PTPN13-206, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 4

Gene PTPN13, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-206ENST00000507902 PXDNLA1KZ92 1463 aa17.9■□□□□ 0.46
PTPN13-206ENST00000507902 GPR162Q16538 588 aa17.9■□□□□ 0.46
PTPN13-206ENST00000507902 KRT24Q2M2I5 525 aa17.9■□□□□ 0.46
PTPN13-206ENST00000507902 HYPKQ9NX55 129 aa17.9■□□□□ 0.46
PTPN13-206ENST00000507902 ATP10DQ9P241 1426 aa17.89■□□□□ 0.46
PTPN13-206ENST00000507902 CNBD1Q8NA66 436 aa17.89■□□□□ 0.45
PTPN13-206ENST00000507902 NECTIN2Q92692 538 aa17.89■□□□□ 0.45
PTPN13-206ENST00000507902 CHPF2Q9P2E5 772 aa17.89■□□□□ 0.45
PTPN13-206ENST00000507902 PDZRN3Q9UPQ7 1066 aa17.89■□□□□ 0.45
PTPN13-206ENST00000507902 SENP3-EIF4A1A0A087X0R7 540 aa17.88■□□□□ 0.45
PTPN13-206ENST00000507902 GRIN3BO60391 1043 aa17.88■□□□□ 0.45
PTPN13-206ENST00000507902 ST5P78524 1137 aa17.88■□□□□ 0.45
PTPN13-206ENST00000507902 GOLGA2Q08379 1002 aa17.88■□□□□ 0.45
PTPN13-206ENST00000507902 PDIA6Q15084 440 aa17.88■□□□□ 0.45
PTPN13-206ENST00000507902 HSP90AB3PQ58FF7 597 aa17.88■□□□□ 0.45
PTPN13-206ENST00000507902 CCDC30Q5VVM6 783 aa17.88■□□□□ 0.45
PTPN13-206ENST00000507902 PELP1Q8IZL8 1130 aaKnown RBP17.88■□□□□ 0.45
PTPN13-206ENST00000507902 TSR2Q969E8 191 aaKnown RBP17.88■□□□□ 0.45
PTPN13-206ENST00000507902 NIP7Q9Y221 180 aaKnown RBP eCLIP17.88■□□□□ 0.45
PTPN13-206ENST00000507902 FANCIQ9NVI1 1328 aa17.88■□□□□ 0.45
PTPN13-206ENST00000507902 KIAA1551Q9HCM1 1747 aa17.87■□□□□ 0.45
PTPN13-206ENST00000507902 NUP98P52948 1817 aa17.87■□□□□ 0.45
PTPN13-206ENST00000507902 NBPF5PQ86XG9 351 aaPredicted RBP17.87■□□□□ 0.45
PTPN13-206ENST00000507902 PROSER3Q2NL68 480 aa17.86■□□□□ 0.45
PTPN13-206ENST00000507902 TPTE2Q6XPS3 522 aa17.86■□□□□ 0.45
PTPN13-206ENST00000507902 TTLL7Q6ZT98 887 aa17.86■□□□□ 0.45
PTPN13-206ENST00000507902 LRP10Q7Z4F1 713 aa17.86■□□□□ 0.45
PTPN13-206ENST00000507902 C8orf58Q8NAV2 365 aa17.86■□□□□ 0.45
PTPN13-206ENST00000507902 STK31Q9BXU1 1019 aa17.86■□□□□ 0.45
PTPN13-206ENST00000507902 NYXQ9GZU5 481 aa17.86■□□□□ 0.45
PTPN13-206ENST00000507902 ZBTB3Q9H5J0 574 aa17.86■□□□□ 0.45
PTPN13-206ENST00000507902 IBTKQ9P2D0 1353 aaPredicted RBP17.86■□□□□ 0.45
PTPN13-206ENST00000507902 ELL2O00472 640 aaPredicted RBP17.85■□□□□ 0.45
PTPN13-206ENST00000507902 PDE6BP35913 854 aa17.85■□□□□ 0.45
PTPN13-206ENST00000507902 TWISTNBQ3B726 338 aaPredicted RBP17.85■□□□□ 0.45
PTPN13-206ENST00000507902 GIGYF2Q6Y7W6 1299 aaKnown RBP17.85■□□□□ 0.45
PTPN13-206ENST00000507902 COPS6Q7L5N1 327 aa17.85■□□□□ 0.45
PTPN13-206ENST00000507902 N4BP2Q86UW6 1770 aaPredicted RBP17.85■□□□□ 0.45
PTPN13-206ENST00000507902 MIER1Q8N108 512 aa17.85■□□□□ 0.45
PTPN13-206ENST00000507902 XAGE3Q8WTP9 111 aa17.85■□□□□ 0.45
PTPN13-206ENST00000507902 ANKRD36CQ5JPF3 1778 aa17.84■□□□□ 0.45
PTPN13-206ENST00000507902 GOLGB1Q14789 3259 aaKnown RBP17.84■□□□□ 0.45
PTPN13-206ENST00000507902 ZNF521Q96K83 1311 aa17.84■□□□□ 0.45
PTPN13-206ENST00000507902 ANXA1P04083 346 aa17.84■□□□□ 0.45
PTPN13-206ENST00000507902 AIMP1Q12904 312 aaKnown RBP17.84■□□□□ 0.45
PTPN13-206ENST00000507902 HLFQ16534 295 aa17.84■□□□□ 0.45
PTPN13-206ENST00000507902 PARP10Q53GL7 1025 aa17.84■□□□□ 0.45
PTPN13-206ENST00000507902 PRR5LQ6MZQ0 368 aa17.84■□□□□ 0.45
PTPN13-206ENST00000507902 BRIP1Q9BX63 1249 aa17.84■□□□□ 0.45
PTPN13-206ENST00000507902 DLEC1Q9Y238 1755 aa17.84■□□□□ 0.45
PTPN13-206ENST00000507902 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.44
PTPN13-206ENST00000507902 PIM2Q9P1W9 311 aa17.83■□□□□ 0.44
PTPN13-206ENST00000507902 BRCA1P38398 1863 aaKnown RBP17.83■□□□□ 0.44
PTPN13-206ENST00000507902 RNF123Q5XPI4 1314 aa17.82■□□□□ 0.44
PTPN13-206ENST00000507902 A0A0G2JLW4 131 aa17.82■□□□□ 0.44
PTPN13-206ENST00000507902 E9PSI1 815 aa17.82■□□□□ 0.44
PTPN13-206ENST00000507902 H0YIN7 160 aa17.82■□□□□ 0.44
PTPN13-206ENST00000507902 DDX58O95786 925 aaKnown RBP17.82■□□□□ 0.44
PTPN13-206ENST00000507902 DPEP1P16444 411 aa17.82■□□□□ 0.44
PTPN13-206ENST00000507902 PLBD2Q8NHP8 589 aa17.82■□□□□ 0.44
PTPN13-206ENST00000507902 ANKRD13DQ6ZTN6 518 aa17.81■□□□□ 0.44
PTPN13-206ENST00000507902 PPP1R42Q7Z4L9 355 aa17.81■□□□□ 0.44
PTPN13-206ENST00000507902 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
PTPN13-206ENST00000507902 UTRNP46939 3433 aa17.81■□□□□ 0.44
PTPN13-206ENST00000507902 DALRD3Q5D0E6 543 aaKnown RBP17.8■□□□□ 0.44
PTPN13-206ENST00000507902 ZNF34Q8IZ26 560 aa17.8■□□□□ 0.44
PTPN13-206ENST00000507902 CACNA1FO60840 1977 aa17.8■□□□□ 0.44
PTPN13-206ENST00000507902 CHD4Q14839 1912 aa17.8■□□□□ 0.44
PTPN13-206ENST00000507902 ANKRD31Q8N7Z5 1873 aa17.8■□□□□ 0.44
PTPN13-206ENST00000507902 ARFGEF2Q9Y6D5 1785 aa17.79■□□□□ 0.44
PTPN13-206ENST00000507902 YBX3P16989 372 aaKnown RBP eCLIP17.79■□□□□ 0.44
PTPN13-206ENST00000507902 GPTP24298 496 aa17.79■□□□□ 0.44
PTPN13-206ENST00000507902 C2CD5Q86YS7 1000 aa17.79■□□□□ 0.44
PTPN13-206ENST00000507902 BCS1LQ9Y276 419 aa17.79■□□□□ 0.44
PTPN13-206ENST00000507902 RIC1Q4ADV7 1423 aa17.79■□□□□ 0.44
PTPN13-206ENST00000507902 ARFGEF1Q9Y6D6 1849 aa17.79■□□□□ 0.44
PTPN13-206ENST00000507902 CHRNA5P30532 468 aa17.78■□□□□ 0.44
PTPN13-206ENST00000507902 EXOSC9Q06265 439 aaKnown RBP17.78■□□□□ 0.44
PTPN13-206ENST00000507902 TCIRG1Q13488 830 aa17.78■□□□□ 0.44
PTPN13-206ENST00000507902 RIC3Q7Z5B4 369 aa17.78■□□□□ 0.44
PTPN13-206ENST00000507902 UBN2Q6ZU65 1347 aa17.77■□□□□ 0.44
PTPN13-206ENST00000507902 FAM177BA6PVY3 158 aa17.77■□□□□ 0.44
PTPN13-206ENST00000507902 KCNA3P22001 575 aa17.77■□□□□ 0.44
PTPN13-206ENST00000507902 UTP14AQ9BVJ6 771 aaKnown RBP17.77■□□□□ 0.44
PTPN13-206ENST00000507902 COL11A2P13942 1736 aaPredicted RBP17.76■□□□□ 0.43
PTPN13-206ENST00000507902 TTLL6Q8N841 843 aa17.76■□□□□ 0.43
PTPN13-206ENST00000507902 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
PTPN13-206ENST00000507902 VAMP4O75379 141 aa17.75■□□□□ 0.43
PTPN13-206ENST00000507902 SUSD4Q5VX71 490 aa17.75■□□□□ 0.43
PTPN13-206ENST00000507902 STYK1Q6J9G0 422 aa17.75■□□□□ 0.43
PTPN13-206ENST00000507902 CNKSR1Q969H4 720 aa17.75■□□□□ 0.43
PTPN13-206ENST00000507902 ZNF428Q96B54 188 aa17.75■□□□□ 0.43
PTPN13-206ENST00000507902 MASTLQ96GX5 879 aa17.75■□□□□ 0.43
PTPN13-206ENST00000507902 WWC3Q9ULE0 1092 aa17.75■□□□□ 0.43
PTPN13-206ENST00000507902 NTSR2O95665 410 aa17.74■□□□□ 0.43
PTPN13-206ENST00000507902 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
PTPN13-206ENST00000507902 SRGNP10124 158 aa17.74■□□□□ 0.43
PTPN13-206ENST00000507902 HSP90B1P14625 803 aaKnown RBP17.74■□□□□ 0.43
PTPN13-206ENST00000507902 NLRP10Q86W26 655 aa17.74■□□□□ 0.43
PTPN13-206ENST00000507902 ZNF622Q969S3 477 aaKnown RBP eCLIP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms