RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 NPHP1O15259 732 aa27.55■■■□□ 2
TRAPPC11-203ENST00000504526 CNBD1Q8NA66 436 aa27.55■■■□□ 2
TRAPPC11-203ENST00000504526 MBIPQ9NS73 344 aa27.55■■■□□ 2
TRAPPC11-203ENST00000504526 MAP3K15Q6ZN16 1313 aa27.55■■■□□ 2
TRAPPC11-203ENST00000504526 CHRNA5P30532 468 aa27.54■■■□□ 2
TRAPPC11-203ENST00000504526 PRR5LQ6MZQ0 368 aa27.54■■■□□ 2
TRAPPC11-203ENST00000504526 BRIP1Q9BX63 1249 aa27.54■■■□□ 2
TRAPPC11-203ENST00000504526 DALRD3Q5D0E6 543 aaKnown RBP27.53■■■□□ 2
TRAPPC11-203ENST00000504526 NIP7Q9Y221 180 aaKnown RBP eCLIP27.53■■■□□ 2
TRAPPC11-203ENST00000504526 PDE6BP35913 854 aa27.52■■■□□ 2
TRAPPC11-203ENST00000504526 ST5P78524 1137 aa27.52■■■□□ 2
TRAPPC11-203ENST00000504526 PDIA6Q15084 440 aa27.52■■■□□ 2
TRAPPC11-203ENST00000504526 BRCA1P38398 1863 aaKnown RBP27.52■■■□□ 2
TRAPPC11-203ENST00000504526 HLFQ16534 295 aa27.51■■□□□ 1.99
TRAPPC11-203ENST00000504526 KRT24Q2M2I5 525 aa27.51■■□□□ 1.99
TRAPPC11-203ENST00000504526 TTLL7Q6ZT98 887 aa27.51■■□□□ 1.99
TRAPPC11-203ENST00000504526 NBPF5PQ86XG9 351 aaPredicted RBP27.51■■□□□ 1.99
TRAPPC11-203ENST00000504526 H0YIN7 160 aa27.5■■□□□ 1.99
TRAPPC11-203ENST00000504526 HDGFL1Q5TGJ6 251 aa27.5■■□□□ 1.99
TRAPPC11-203ENST00000504526 LRP10Q7Z4F1 713 aa27.5■■□□□ 1.99
TRAPPC11-203ENST00000504526 C2CD5Q86YS7 1000 aa27.5■■□□□ 1.99
TRAPPC11-203ENST00000504526 DDX21Q9NR30 783 aaKnown RBP eCLIP27.5■■□□□ 1.99
TRAPPC11-203ENST00000504526 TPTE2Q6XPS3 522 aa27.49■■□□□ 1.99
TRAPPC11-203ENST00000504526 ATP10DQ9P241 1426 aa27.49■■□□□ 1.99
TRAPPC11-203ENST00000504526 DUSP27Q5VZP5 1158 aa27.48■■□□□ 1.99
TRAPPC11-203ENST00000504526 WWC1Q8IX03 1113 aa27.48■■□□□ 1.99
TRAPPC11-203ENST00000504526 NECTIN2Q92692 538 aa27.48■■□□□ 1.99
TRAPPC11-203ENST00000504526 ZBTB3Q9H5J0 574 aa27.48■■□□□ 1.99
TRAPPC11-203ENST00000504526 PROSER3Q2NL68 480 aa27.47■■□□□ 1.99
TRAPPC11-203ENST00000504526 GIGYF2Q6Y7W6 1299 aaKnown RBP27.47■■□□□ 1.99
TRAPPC11-203ENST00000504526 CHMP4AQ9BY43 222 aa27.47■■□□□ 1.99
TRAPPC11-203ENST00000504526 ZNF784Q8NCA9 323 aaPredicted RBP27.46■■□□□ 1.99
TRAPPC11-203ENST00000504526 DBF4Q9UBU7 674 aaPredicted RBP27.46■■□□□ 1.99
TRAPPC11-203ENST00000504526 UTRNP46939 3433 aa27.45■■□□□ 1.99
TRAPPC11-203ENST00000504526 IL16Q14005 1332 aa27.45■■□□□ 1.99
TRAPPC11-203ENST00000504526 ANXA1P04083 346 aa27.45■■□□□ 1.98
TRAPPC11-203ENST00000504526 FAM9BQ8IZU0 186 aa27.45■■□□□ 1.98
TRAPPC11-203ENST00000504526 TTLL6Q8N841 843 aa27.45■■□□□ 1.98
TRAPPC11-203ENST00000504526 NYXQ9GZU5 481 aa27.45■■□□□ 1.98
TRAPPC11-203ENST00000504526 ARFGEF1Q9Y6D6 1849 aa27.45■■□□□ 1.98
TRAPPC11-203ENST00000504526 GOLGB1Q14789 3259 aaKnown RBP27.45■■□□□ 1.98
TRAPPC11-203ENST00000504526 ARHGAP27Q6ZUM4 889 aa27.44■■□□□ 1.98
TRAPPC11-203ENST00000504526 COPS6Q7L5N1 327 aa27.44■■□□□ 1.98
TRAPPC11-203ENST00000504526 CCDC24Q8N4L8 307 aa27.44■■□□□ 1.98
TRAPPC11-203ENST00000504526 CHPF2Q9P2E5 772 aa27.44■■□□□ 1.98
TRAPPC11-203ENST00000504526 DLEC1Q9Y238 1755 aa27.44■■□□□ 1.98
TRAPPC11-203ENST00000504526 ANKRD31Q8N7Z5 1873 aa27.43■■□□□ 1.98
TRAPPC11-203ENST00000504526 GTF2E1P29083 439 aaPredicted RBP27.43■■□□□ 1.98
TRAPPC11-203ENST00000504526 NUP98P52948 1817 aa27.43■■□□□ 1.98
TRAPPC11-203ENST00000504526 XAGE3Q8WTP9 111 aa27.42■■□□□ 1.98
TRAPPC11-203ENST00000504526 IBTKQ9P2D0 1353 aaPredicted RBP27.42■■□□□ 1.98
TRAPPC11-203ENST00000504526 HSP90AB3PQ58FF7 597 aa27.41■■□□□ 1.98
TRAPPC11-203ENST00000504526 ZNF34Q8IZ26 560 aa27.41■■□□□ 1.98
TRAPPC11-203ENST00000504526 HYPKQ9NX55 129 aa27.41■■□□□ 1.98
TRAPPC11-203ENST00000504526 FAM177BA6PVY3 158 aa27.4■■□□□ 1.98
TRAPPC11-203ENST00000504526 AIMP1Q12904 312 aaKnown RBP27.4■■□□□ 1.98
TRAPPC11-203ENST00000504526 PARP10Q53GL7 1025 aa27.4■■□□□ 1.98
TRAPPC11-203ENST00000504526 WDR63Q8IWG1 891 aa27.4■■□□□ 1.98
TRAPPC11-203ENST00000504526 ZNF622Q969S3 477 aaKnown RBP eCLIP27.4■■□□□ 1.98
TRAPPC11-203ENST00000504526 SENP3-EIF4A1A0A087X0R7 540 aa27.39■■□□□ 1.98
TRAPPC11-203ENST00000504526 SRGNP10124 158 aa27.39■■□□□ 1.98
TRAPPC11-203ENST00000504526 GPTP24298 496 aa27.39■■□□□ 1.98
TRAPPC11-203ENST00000504526 STYK1Q6J9G0 422 aa27.39■■□□□ 1.98
TRAPPC11-203ENST00000504526 MASTLQ96GX5 879 aa27.39■■□□□ 1.98
TRAPPC11-203ENST00000504526 KLRG2A4D1S0 409 aaPredicted RBP27.38■■□□□ 1.97
TRAPPC11-203ENST00000504526 PPP1R42Q7Z4L9 355 aa27.38■■□□□ 1.97
TRAPPC11-203ENST00000504526 CNKSR1Q969H4 720 aa27.38■■□□□ 1.97
TRAPPC11-203ENST00000504526 UBN2Q6ZU65 1347 aa27.38■■□□□ 1.97
TRAPPC11-203ENST00000504526 ADCY9O60503 1353 aa27.37■■□□□ 1.97
TRAPPC11-203ENST00000504526 ELL2O00472 640 aaPredicted RBP27.37■■□□□ 1.97
TRAPPC11-203ENST00000504526 C8orf58Q8NAV2 365 aa27.37■■□□□ 1.97
TRAPPC11-203ENST00000504526 SUSD4Q5VX71 490 aa27.36■■□□□ 1.97
TRAPPC11-203ENST00000504526 PLBD2Q8NHP8 589 aa27.36■■□□□ 1.97
TRAPPC11-203ENST00000504526 TSR2Q969E8 191 aaKnown RBP27.36■■□□□ 1.97
TRAPPC11-203ENST00000504526 NPR1P16066 1061 aa27.35■■□□□ 1.97
TRAPPC11-203ENST00000504526 CCDC30Q5VVM6 783 aa27.35■■□□□ 1.97
TRAPPC11-203ENST00000504526 SALL2Q9Y467 1007 aaPredicted RBP27.35■■□□□ 1.97
TRAPPC11-203ENST00000504526 COL11A2P13942 1736 aaPredicted RBP27.35■■□□□ 1.97
TRAPPC11-203ENST00000504526 RIC1Q4ADV7 1423 aa27.34■■□□□ 1.97
TRAPPC11-203ENST00000504526 TCIRG1Q13488 830 aa27.34■■□□□ 1.97
TRAPPC11-203ENST00000504526 ANKRD13DQ6ZTN6 518 aa27.34■■□□□ 1.97
TRAPPC11-203ENST00000504526 RNF123Q5XPI4 1314 aa27.34■■□□□ 1.97
TRAPPC11-203ENST00000504526 NTSR2O95665 410 aa27.33■■□□□ 1.97
TRAPPC11-203ENST00000504526 NUTM1Q86Y26 1132 aa27.33■■□□□ 1.97
TRAPPC11-203ENST00000504526 ERFEQ4G0M1 354 aa27.32■■□□□ 1.96
TRAPPC11-203ENST00000504526 UTP14AQ9BVJ6 771 aaKnown RBP27.32■■□□□ 1.96
TRAPPC11-203ENST00000504526 TSPYL6Q8N831 410 aa27.31■■□□□ 1.96
TRAPPC11-203ENST00000504526 ABCC12Q96J65 1359 aa27.31■■□□□ 1.96
TRAPPC11-203ENST00000504526 CCER2I3L3R5 266 aa27.3■■□□□ 1.96
TRAPPC11-203ENST00000504526 TWISTNBQ3B726 338 aaPredicted RBP27.3■■□□□ 1.96
TRAPPC11-203ENST00000504526 SOGA3Q5TF21 947 aa27.3■■□□□ 1.96
TRAPPC11-203ENST00000504526 PRPF40BQ6NWY9 871 aaKnown RBP27.3■■□□□ 1.96
TRAPPC11-203ENST00000504526 GOLGA2Q08379 1002 aa27.29■■□□□ 1.96
TRAPPC11-203ENST00000504526 CRY2Q49AN0 593 aa27.29■■□□□ 1.96
TRAPPC11-203ENST00000504526 C9orf131Q5VYM1 1079 aa27.29■■□□□ 1.96
TRAPPC11-203ENST00000504526 NLRP10Q86W26 655 aa27.29■■□□□ 1.96
TRAPPC11-203ENST00000504526 FANCIQ9NVI1 1328 aa27.29■■□□□ 1.96
TRAPPC11-203ENST00000504526 ANKRD36CQ5JPF3 1778 aa27.28■■□□□ 1.96
TRAPPC11-203ENST00000504526 C21orf2O43822 256 aa27.28■■□□□ 1.96
TRAPPC11-203ENST00000504526 ALDH1B1P30837 517 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms