RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 KIDINS220Q9ULH0 1771 aa9.86□□□□□ -0.83
CRNDE-201ENST00000501177 PHKA2P46019 1235 aa9.86□□□□□ -0.83
CRNDE-201ENST00000501177 TROQ12816 1431 aaPredicted RBP9.86□□□□□ -0.83
CRNDE-201ENST00000501177 WDR44Q5JSH3 913 aa9.86□□□□□ -0.83
CRNDE-201ENST00000501177 XAGE2Q96GT9 111 aa9.86□□□□□ -0.83
CRNDE-201ENST00000501177 FHDC1Q9C0D6 1143 aaPredicted RBP9.86□□□□□ -0.83
CRNDE-201ENST00000501177 MBIPQ9NS73 344 aa9.86□□□□□ -0.83
CRNDE-201ENST00000501177 GDF11O95390 407 aa9.85□□□□□ -0.83
CRNDE-201ENST00000501177 MYCP01106 439 aaPredicted RBP9.85□□□□□ -0.83
CRNDE-201ENST00000501177 UBAP1LF5GYI3 381 aa9.84□□□□□ -0.83
CRNDE-201ENST00000501177 EIF4G2P78344 907 aaKnown RBP eCLIP9.84□□□□□ -0.83
CRNDE-201ENST00000501177 TMEM151AQ8N4L1 468 aa9.84□□□□□ -0.83
CRNDE-201ENST00000501177 AFAP1Q8N556 730 aa9.84□□□□□ -0.83
CRNDE-201ENST00000501177 CHIC2Q9UKJ5 165 aa9.84□□□□□ -0.83
CRNDE-201ENST00000501177 DOLKQ9UPQ8 538 aa9.84□□□□□ -0.83
CRNDE-201ENST00000501177 TCOF1Q13428 1488 aaKnown RBP9.84□□□□□ -0.83
CRNDE-201ENST00000501177 CEP170BQ9Y4F5 1589 aaPredicted RBP9.84□□□□□ -0.83
CRNDE-201ENST00000501177 H7C1W4 665 aa9.83□□□□□ -0.84
CRNDE-201ENST00000501177 F11P03951 625 aa9.83□□□□□ -0.84
CRNDE-201ENST00000501177 IRS1P35568 1242 aa9.83□□□□□ -0.84
CRNDE-201ENST00000501177 RANGAP1P46060 587 aaPredicted RBP9.83□□□□□ -0.84
CRNDE-201ENST00000501177 RNF135Q8IUD6 432 aa9.83□□□□□ -0.84
CRNDE-201ENST00000501177 ETNK1Q9HBU6 452 aa9.83□□□□□ -0.84
CRNDE-201ENST00000501177 GPAMQ9HCL2 828 aa9.83□□□□□ -0.84
CRNDE-201ENST00000501177 POLR1AO95602 1720 aaPredicted RBP9.82□□□□□ -0.84
CRNDE-201ENST00000501177 PRKCSHP14314 528 aaPredicted RBP9.82□□□□□ -0.84
CRNDE-201ENST00000501177 ABL2P42684 1182 aa9.82□□□□□ -0.84
CRNDE-201ENST00000501177 FOXR1Q6PIV2 292 aa9.82□□□□□ -0.84
CRNDE-201ENST00000501177 ACDQ96AP0 544 aa9.82□□□□□ -0.84
CRNDE-201ENST00000501177 ZSCAN10Q96SZ4 725 aaPredicted RBP9.82□□□□□ -0.84
CRNDE-201ENST00000501177 NUCKS1Q9H1E3 243 aaKnown RBP9.82□□□□□ -0.84
CRNDE-201ENST00000501177 CPS1P31327 1500 aa9.82□□□□□ -0.84
CRNDE-201ENST00000501177 ZNF335Q9H4Z2 1342 aaPredicted RBP9.82□□□□□ -0.84
CRNDE-201ENST00000501177 CLTCQ00610 1675 aaKnown RBP9.81□□□□□ -0.84
CRNDE-201ENST00000501177 RNF225M0QZC1 329 aaPredicted RBP9.81□□□□□ -0.84
CRNDE-201ENST00000501177 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
CRNDE-201ENST00000501177 C4orf17Q53FE4 359 aa9.81□□□□□ -0.84
CRNDE-201ENST00000501177 OXLD1Q5BKU9 147 aa9.81□□□□□ -0.84
CRNDE-201ENST00000501177 CDC42BPAQ5VT25 1732 aa9.81□□□□□ -0.84
CRNDE-201ENST00000501177 LRRIQ1Q96JM4 1722 aa9.81□□□□□ -0.84
CRNDE-201ENST00000501177 MARSP56192 900 aaKnown RBP9.8□□□□□ -0.84
CRNDE-201ENST00000501177 MCM6Q14566 821 aa9.8□□□□□ -0.84
CRNDE-201ENST00000501177 PRM3Q9NNZ6 103 aa9.8□□□□□ -0.84
CRNDE-201ENST00000501177 PLXNC1O60486 1568 aa9.8□□□□□ -0.84
CRNDE-201ENST00000501177 SAMD9LQ8IVG5 1584 aa9.8□□□□□ -0.84
CRNDE-201ENST00000501177 CCDC18Q5T9S5 1454 aa9.79□□□□□ -0.84
CRNDE-201ENST00000501177 ZMYM3Q14202 1370 aa9.79□□□□□ -0.84
CRNDE-201ENST00000501177 MAP3K10Q02779 954 aa9.79□□□□□ -0.84
CRNDE-201ENST00000501177 USP4Q13107 963 aa9.79□□□□□ -0.84
CRNDE-201ENST00000501177 UBAP2LQ14157 1087 aaKnown RBP9.79□□□□□ -0.84
CRNDE-201ENST00000501177 TRERF1Q96PN7 1200 aa9.79□□□□□ -0.84
CRNDE-201ENST00000501177 SCNN1DP51172 638 aa9.78□□□□□ -0.84
CRNDE-201ENST00000501177 TMEM214Q6NUQ4 689 aaKnown RBP9.78□□□□□ -0.84
CRNDE-201ENST00000501177 INO80Q9ULG1 1556 aaPredicted RBP9.77□□□□□ -0.85
CRNDE-201ENST00000501177 PTPRKQ15262 1439 aa9.77□□□□□ -0.85
CRNDE-201ENST00000501177 A0A1B0GTH6 734 aa9.77□□□□□ -0.85
CRNDE-201ENST00000501177 TOM1O60784 492 aa9.77□□□□□ -0.85
CRNDE-201ENST00000501177 MX2P20592 715 aa9.77□□□□□ -0.85
CRNDE-201ENST00000501177 ESCO1Q5FWF5 840 aa9.77□□□□□ -0.85
CRNDE-201ENST00000501177 RUBCNLQ9H714 662 aa9.77□□□□□ -0.85
CRNDE-201ENST00000501177 ARHGAP35Q9NRY4 1499 aa9.77□□□□□ -0.85
CRNDE-201ENST00000501177 ADGBQ8N7X0 1667 aa9.77□□□□□ -0.85
CRNDE-201ENST00000501177 ATP7AQ04656 1500 aa9.77□□□□□ -0.85
CRNDE-201ENST00000501177 DNMT1P26358 1616 aaKnown RBP9.76□□□□□ -0.85
CRNDE-201ENST00000501177 BCRP11274 1271 aa9.76□□□□□ -0.85
CRNDE-201ENST00000501177 MSX1P28360 303 aa9.76□□□□□ -0.85
CRNDE-201ENST00000501177 TLR1Q15399 786 aa9.76□□□□□ -0.85
CRNDE-201ENST00000501177 GNASQ5JWF2 1037 aa9.76□□□□□ -0.85
CRNDE-201ENST00000501177 A2ML1A8K2U0 1454 aa9.76□□□□□ -0.85
CRNDE-201ENST00000501177 PIK3CDO00329 1044 aa9.75□□□□□ -0.85
CRNDE-201ENST00000501177 PPARGC1BQ86YN6 1023 aaKnown RBP9.75□□□□□ -0.85
CRNDE-201ENST00000501177 PLPP7Q8NBV4 271 aa9.75□□□□□ -0.85
CRNDE-201ENST00000501177 SCARF2Q96GP6 870 aaPredicted RBP9.75□□□□□ -0.85
CRNDE-201ENST00000501177 SYCP2Q9BX26 1530 aa9.75□□□□□ -0.85
CRNDE-201ENST00000501177 FAM135AQ9P2D6 1515 aa9.75□□□□□ -0.85
CRNDE-201ENST00000501177 CNTNAP5Q8WYK1 1306 aa9.75□□□□□ -0.85
CRNDE-201ENST00000501177 PLEKHH2Q8IVE3 1493 aa9.74□□□□□ -0.85
CRNDE-201ENST00000501177 HSPA1LP34931 641 aa9.74□□□□□ -0.85
CRNDE-201ENST00000501177 GDF10P55107 478 aa9.74□□□□□ -0.85
CRNDE-201ENST00000501177 NEURL4Q96JN8 1562 aa9.74□□□□□ -0.85
CRNDE-201ENST00000501177 A2MP01023 1474 aa9.73□□□□□ -0.85
CRNDE-201ENST00000501177 SHANK2Q9UPX8 1470 aa9.73□□□□□ -0.85
CRNDE-201ENST00000501177 SYNMO15061 1565 aa9.73□□□□□ -0.85
CRNDE-201ENST00000501177 WASHC4Q2M389 1173 aa9.73□□□□□ -0.85
CRNDE-201ENST00000501177 RHBDD1Q8TEB9 315 aa9.73□□□□□ -0.85
CRNDE-201ENST00000501177 CFHR5Q9BXR6 569 aa9.73□□□□□ -0.85
CRNDE-201ENST00000501177 COG6Q9Y2V7 657 aa9.73□□□□□ -0.85
CRNDE-201ENST00000501177 DNMT3AQ9Y6K1 912 aaPredicted RBP9.73□□□□□ -0.85
CRNDE-201ENST00000501177 RNF17Q9BXT8 1623 aaKnown RBP9.72□□□□□ -0.85
CRNDE-201ENST00000501177 INHAP05111 366 aa9.72□□□□□ -0.85
CRNDE-201ENST00000501177 KANK3Q6NY19 840 aa9.72□□□□□ -0.85
CRNDE-201ENST00000501177 C1orf229Q6ZS94 237 aaPredicted RBP9.72□□□□□ -0.85
CRNDE-201ENST00000501177 ENAMQ9NRM1 1142 aa9.72□□□□□ -0.85
CRNDE-201ENST00000501177 SPAG9O60271 1321 aaKnown RBP9.72□□□□□ -0.85
CRNDE-201ENST00000501177 KIAA1107Q9UPP5 1409 aa9.72□□□□□ -0.85
CRNDE-201ENST00000501177 DEPDC5O75140 1603 aa9.71□□□□□ -0.85
CRNDE-201ENST00000501177 GTF2E1P29083 439 aaPredicted RBP9.71□□□□□ -0.86
CRNDE-201ENST00000501177 PLA2G4AP47712 749 aa9.71□□□□□ -0.86
CRNDE-201ENST00000501177 PIP4K2BP78356 416 aa9.71□□□□□ -0.86
CRNDE-201ENST00000501177 SEMA3FQ13275 785 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms