RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 SPOCK2Q92563 424 aa14.75□□□□□ -0.05
ERCC8-208ENST00000497892 TEX13AQ9BXU3 409 aaPredicted RBP14.75□□□□□ -0.05
ERCC8-208ENST00000497892 SCUBE2Q9NQ36 999 aa14.75□□□□□ -0.05
ERCC8-208ENST00000497892 MIS18AQ9NYP9 233 aa14.75□□□□□ -0.05
ERCC8-208ENST00000497892 STARD3NLO95772 234 aa14.74□□□□□ -0.05
ERCC8-208ENST00000497892 BABAM1Q9NWV8 329 aa14.74□□□□□ -0.05
ERCC8-208ENST00000497892 SOS1Q07889 1333 aaPredicted RBP14.73□□□□□ -0.05
ERCC8-208ENST00000497892 SNRPA1P09661 255 aaKnown RBP14.73□□□□□ -0.05
ERCC8-208ENST00000497892 CHRM1P11229 460 aaPredicted RBP14.73□□□□□ -0.05
ERCC8-208ENST00000497892 TRAPPC3LQ5T215 181 aa14.73□□□□□ -0.05
ERCC8-208ENST00000497892 ZBTB1Q9Y2K1 713 aa14.73□□□□□ -0.05
ERCC8-208ENST00000497892 COL15A1P39059 1388 aa14.73□□□□□ -0.05
ERCC8-208ENST00000497892 SCN7AQ01118 1682 aa14.72□□□□□ -0.05
ERCC8-208ENST00000497892 ARHGEF1Q92888 912 aaKnown RBP14.72□□□□□ -0.05
ERCC8-208ENST00000497892 PPP1R1BQ9UD71 204 aaPredicted RBP14.72□□□□□ -0.05
ERCC8-208ENST00000497892 TSPYL4Q9UJ04 414 aa14.72□□□□□ -0.05
ERCC8-208ENST00000497892 PRAMEF22A3QJZ6 481 aa14.71□□□□□ -0.05
ERCC8-208ENST00000497892 POLD1P28340 1107 aa14.71□□□□□ -0.05
ERCC8-208ENST00000497892 EIF4A1P60842 406 aaKnown RBP14.71□□□□□ -0.05
ERCC8-208ENST00000497892 MSL1Q68DK7 614 aa14.71□□□□□ -0.05
ERCC8-208ENST00000497892 USP42Q9H9J4 1324 aaKnown RBP14.7□□□□□ -0.06
ERCC8-208ENST00000497892 CHL1O00533 1208 aa14.7□□□□□ -0.06
ERCC8-208ENST00000497892 RFC4P35249 363 aa14.7□□□□□ -0.06
ERCC8-208ENST00000497892 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
ERCC8-208ENST00000497892 BCORQ6W2J9 1755 aa14.7□□□□□ -0.06
ERCC8-208ENST00000497892 CCER2I3L3R5 266 aa14.69□□□□□ -0.06
ERCC8-208ENST00000497892 GIGYF1O75420 1035 aaPredicted RBP14.69□□□□□ -0.06
ERCC8-208ENST00000497892 CANXP27824 592 aaKnown RBP14.69□□□□□ -0.06
ERCC8-208ENST00000497892 EIF5P55010 431 aaKnown RBP14.69□□□□□ -0.06
ERCC8-208ENST00000497892 CALD1Q05682 793 aaKnown RBP14.69□□□□□ -0.06
ERCC8-208ENST00000497892 CCDC27Q2M243 656 aa14.69□□□□□ -0.06
ERCC8-208ENST00000497892 FAM9BQ8IZU0 186 aa14.69□□□□□ -0.06
ERCC8-208ENST00000497892 ARXQ96QS3 562 aa14.69□□□□□ -0.06
ERCC8-208ENST00000497892 USP16Q9Y5T5 823 aa14.69□□□□□ -0.06
ERCC8-208ENST00000497892 A1BGP04217 495 aa14.68□□□□□ -0.06
ERCC8-208ENST00000497892 GYS1P13807 737 aa14.68□□□□□ -0.06
ERCC8-208ENST00000497892 IL6STP40189 918 aaPredicted RBP14.68□□□□□ -0.06
ERCC8-208ENST00000497892 DIEXFQ68CQ4 756 aaKnown RBP14.68□□□□□ -0.06
ERCC8-208ENST00000497892 CFAP44Q96MT7 982 aa14.68□□□□□ -0.06
ERCC8-208ENST00000497892 IRX5P78411 483 aaPredicted RBP14.67□□□□□ -0.06
ERCC8-208ENST00000497892 NLGN1Q8N2Q7 840 aa14.67□□□□□ -0.06
ERCC8-208ENST00000497892 IFT57Q9NWB7 429 aa14.67□□□□□ -0.06
ERCC8-208ENST00000497892 SRP68Q9UHB9 627 aaKnown RBP14.67□□□□□ -0.06
ERCC8-208ENST00000497892 ZNF853P0CG23 659 aa14.66□□□□□ -0.06
ERCC8-208ENST00000497892 WWC1Q8IX03 1113 aa14.66□□□□□ -0.06
ERCC8-208ENST00000497892 FHDC1Q9C0D6 1143 aaPredicted RBP14.66□□□□□ -0.06
ERCC8-208ENST00000497892 NARFQ9UHQ1 456 aa14.66□□□□□ -0.06
ERCC8-208ENST00000497892 LAS1LQ9Y4W2 734 aaKnown RBP14.66□□□□□ -0.06
ERCC8-208ENST00000497892 KIF13BQ9NQT8 1826 aa14.66□□□□□ -0.06
ERCC8-208ENST00000497892 A0A087WZG4 1122 aa14.65□□□□□ -0.06
ERCC8-208ENST00000497892 SENP3-EIF4A1A0A087X0R7 540 aa14.65□□□□□ -0.06
ERCC8-208ENST00000497892 NBPF26B4DH59 902 aa14.65□□□□□ -0.06
ERCC8-208ENST00000497892 PLCG2P16885 1265 aa14.65□□□□□ -0.06
ERCC8-208ENST00000497892 GNAI1P63096 354 aa14.65□□□□□ -0.06
ERCC8-208ENST00000497892 NBPF10Q6P3W6 841 aaKnown RBP14.65□□□□□ -0.06
ERCC8-208ENST00000497892 NBPF15Q8N660 670 aa14.65□□□□□ -0.06
ERCC8-208ENST00000497892 MBIPQ9NS73 344 aa14.65□□□□□ -0.06
ERCC8-208ENST00000497892 ZPR1O75312 459 aa14.64□□□□□ -0.07
ERCC8-208ENST00000497892 MMP10P09238 476 aa14.64□□□□□ -0.07
ERCC8-208ENST00000497892 PIP4K2AP48426 406 aaPredicted RBP14.64□□□□□ -0.07
ERCC8-208ENST00000497892 USPL1Q5W0Q7 1092 aa14.64□□□□□ -0.07
ERCC8-208ENST00000497892 ZNF330Q9Y3S2 320 aaPredicted RBP14.64□□□□□ -0.07
ERCC8-208ENST00000497892 ERBB4Q15303 1308 aa14.64□□□□□ -0.07
ERCC8-208ENST00000497892 NRXN2Q9P2S2 1712 aa14.63□□□□□ -0.07
ERCC8-208ENST00000497892 NGEFQ8N5V2 710 aa14.63□□□□□ -0.07
ERCC8-208ENST00000497892 SYT17Q9BSW7 474 aa14.63□□□□□ -0.07
ERCC8-208ENST00000497892 BCL2L12Q9HB09 334 aa14.63□□□□□ -0.07
ERCC8-208ENST00000497892 IL16Q14005 1332 aa14.63□□□□□ -0.07
ERCC8-208ENST00000497892 AFDNP55196 1824 aaKnown RBP14.62□□□□□ -0.07
ERCC8-208ENST00000497892 HOXB7P09629 217 aa14.62□□□□□ -0.07
ERCC8-208ENST00000497892 KRT24Q2M2I5 525 aa14.62□□□□□ -0.07
ERCC8-208ENST00000497892 NPM2Q86SE8 214 aaKnown RBP14.62□□□□□ -0.07
ERCC8-208ENST00000497892 CIZ1Q9ULV3 898 aaPredicted RBP14.62□□□□□ -0.07
ERCC8-208ENST00000497892 KIAA1551Q9HCM1 1747 aa14.61□□□□□ -0.07
ERCC8-208ENST00000497892 C10orf71Q711Q0 1435 aa14.61□□□□□ -0.07
ERCC8-208ENST00000497892 DZIP3Q86Y13 1208 aaKnown RBP14.61□□□□□ -0.07
ERCC8-208ENST00000497892 TBC1D2BQ9UPU7 963 aa14.61□□□□□ -0.07
ERCC8-208ENST00000497892 CAMTA2O94983 1202 aa14.6□□□□□ -0.07
ERCC8-208ENST00000497892 DDR1Q08345 913 aa14.6□□□□□ -0.07
ERCC8-208ENST00000497892 CD2APQ9Y5K6 639 aa14.6□□□□□ -0.07
ERCC8-208ENST00000497892 RGL2O15211 777 aa14.59□□□□□ -0.07
ERCC8-208ENST00000497892 TM4SF1P30408 202 aa14.59□□□□□ -0.07
ERCC8-208ENST00000497892 NFIXQ14938 502 aa14.59□□□□□ -0.07
ERCC8-208ENST00000497892 PDIA6Q15084 440 aa14.59□□□□□ -0.07
ERCC8-208ENST00000497892 WDR63Q8IWG1 891 aa14.59□□□□□ -0.07
ERCC8-208ENST00000497892 OCEL1Q9H607 264 aa14.59□□□□□ -0.07
ERCC8-208ENST00000497892 SALL2Q9Y467 1007 aaPredicted RBP14.59□□□□□ -0.07
ERCC8-208ENST00000497892 PARP3Q9Y6F1 533 aa14.59□□□□□ -0.07
ERCC8-208ENST00000497892 NUP98P52948 1817 aa14.58□□□□□ -0.08
ERCC8-208ENST00000497892 POLRMTO00411 1230 aaKnown RBP14.58□□□□□ -0.08
ERCC8-208ENST00000497892 MYL6BP14649 208 aa14.58□□□□□ -0.08
ERCC8-208ENST00000497892 EIF2S2P20042 333 aaKnown RBP14.58□□□□□ -0.08
ERCC8-208ENST00000497892 DUSP27Q5VZP5 1158 aa14.58□□□□□ -0.08
ERCC8-208ENST00000497892 LRP10Q7Z4F1 713 aa14.58□□□□□ -0.08
ERCC8-208ENST00000497892 NLGN2Q8NFZ4 835 aa14.58□□□□□ -0.08
ERCC8-208ENST00000497892 TSR2Q969E8 191 aaKnown RBP14.58□□□□□ -0.08
ERCC8-208ENST00000497892 ZNF521Q96K83 1311 aa14.58□□□□□ -0.08
ERCC8-208ENST00000497892 PSEN1P49768 467 aa14.57□□□□□ -0.08
ERCC8-208ENST00000497892 HDGFL1Q5TGJ6 251 aa14.57□□□□□ -0.08
ERCC8-208ENST00000497892 ZNF652Q9Y2D9 606 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms