RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 DDR1Q08345 913 aa16.11■□□□□ 0.17
MRPL55-233ENST00000495899 NFIXQ14938 502 aa16.11■□□□□ 0.17
MRPL55-233ENST00000495899 CLEC4GQ6UXB4 293 aa16.11■□□□□ 0.17
MRPL55-233ENST00000495899 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
MRPL55-233ENST00000495899 CAMTA2O94983 1202 aa16.1■□□□□ 0.17
MRPL55-233ENST00000495899 HOXB7P09629 217 aa16.1■□□□□ 0.17
MRPL55-233ENST00000495899 PIP4K2AP48426 406 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-233ENST00000495899 NGEFQ8N5V2 710 aa16.1■□□□□ 0.17
MRPL55-233ENST00000495899 WWC1Q8IX03 1113 aa16.09■□□□□ 0.17
MRPL55-233ENST00000495899 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
MRPL55-233ENST00000495899 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
MRPL55-233ENST00000495899 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
MRPL55-233ENST00000495899 GPR162Q16538 588 aa16.08■□□□□ 0.16
MRPL55-233ENST00000495899 C10orf71Q711Q0 1435 aa16.08■□□□□ 0.16
MRPL55-233ENST00000495899 ERVV-1B6SEH8 477 aa16.07■□□□□ 0.16
MRPL55-233ENST00000495899 CCER2I3L3R5 266 aa16.07■□□□□ 0.16
MRPL55-233ENST00000495899 SERPINB2P05120 415 aa16.07■□□□□ 0.16
MRPL55-233ENST00000495899 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
MRPL55-233ENST00000495899 TBC1D9BQ66K14 1250 aa16.07■□□□□ 0.16
MRPL55-233ENST00000495899 SETDB2Q96T68 719 aa16.07■□□□□ 0.16
MRPL55-233ENST00000495899 IL16Q14005 1332 aa16.06■□□□□ 0.16
MRPL55-233ENST00000495899 PDIA6Q15084 440 aa16.06■□□□□ 0.16
MRPL55-233ENST00000495899 CHMP4AQ9BY43 222 aa16.06■□□□□ 0.16
MRPL55-233ENST00000495899 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
MRPL55-233ENST00000495899 MYL6BP14649 208 aa16.05■□□□□ 0.16
MRPL55-233ENST00000495899 BICDL1Q6ZP65 573 aa16.05■□□□□ 0.16
MRPL55-233ENST00000495899 WDR63Q8IWG1 891 aa16.05■□□□□ 0.16
MRPL55-233ENST00000495899 CARMIL3Q8ND23 1372 aa16.04■□□□□ 0.16
MRPL55-233ENST00000495899 KRT24Q2M2I5 525 aa16.04■□□□□ 0.16
MRPL55-233ENST00000495899 DUSP27Q5VZP5 1158 aa16.04■□□□□ 0.16
MRPL55-233ENST00000495899 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
MRPL55-233ENST00000495899 LRP10Q7Z4F1 713 aa16.04■□□□□ 0.16
MRPL55-233ENST00000495899 DDX21Q9NR30 783 aaKnown RBP eCLIP16.04■□□□□ 0.16
MRPL55-233ENST00000495899 LAMB4A4D0S4 1761 aa16.04■□□□□ 0.16
MRPL55-233ENST00000495899 MAP3K15Q6ZN16 1313 aa16.03■□□□□ 0.16
MRPL55-233ENST00000495899 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
MRPL55-233ENST00000495899 HDGFL1Q5TGJ6 251 aa16.03■□□□□ 0.16
MRPL55-233ENST00000495899 PELP1Q8IZL8 1130 aaKnown RBP16.03■□□□□ 0.16
MRPL55-233ENST00000495899 DBF4Q9UBU7 674 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-233ENST00000495899 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
MRPL55-233ENST00000495899 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
MRPL55-233ENST00000495899 PRR29P0C7W0 189 aa16.02■□□□□ 0.16
MRPL55-233ENST00000495899 DPEP1P16444 411 aa16.02■□□□□ 0.16
MRPL55-233ENST00000495899 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.16
MRPL55-233ENST00000495899 TTLL7Q6ZT98 887 aa16.02■□□□□ 0.16
MRPL55-233ENST00000495899 SCN7AQ01118 1682 aa16.02■□□□□ 0.15
MRPL55-233ENST00000495899 KCNA3P22001 575 aa16.01■□□□□ 0.15
MRPL55-233ENST00000495899 HLFQ16534 295 aa16.01■□□□□ 0.15
MRPL55-233ENST00000495899 BRIP1Q9BX63 1249 aa16.01■□□□□ 0.15
MRPL55-233ENST00000495899 PDZRN3Q9UPQ7 1066 aa16.01■□□□□ 0.15
MRPL55-233ENST00000495899 NIP7Q9Y221 180 aaKnown RBP eCLIP16.01■□□□□ 0.15
MRPL55-233ENST00000495899 SENP3-EIF4A1A0A087X0R7 540 aa16■□□□□ 0.15
MRPL55-233ENST00000495899 PROSER3Q2NL68 480 aa16■□□□□ 0.15
MRPL55-233ENST00000495899 DIEXFQ68CQ4 756 aaKnown RBP16■□□□□ 0.15
MRPL55-233ENST00000495899 PRR5LQ6MZQ0 368 aa16■□□□□ 0.15
MRPL55-233ENST00000495899 TPTE2Q6XPS3 522 aa16■□□□□ 0.15
MRPL55-233ENST00000495899 GIGYF2Q6Y7W6 1299 aaKnown RBP16■□□□□ 0.15
MRPL55-233ENST00000495899 CNBD1Q8NA66 436 aa16■□□□□ 0.15
MRPL55-233ENST00000495899 C8orf58Q8NAV2 365 aa16■□□□□ 0.15
MRPL55-233ENST00000495899 NECTIN2Q92692 538 aa16■□□□□ 0.15
MRPL55-233ENST00000495899 HYPKQ9NX55 129 aa16■□□□□ 0.15
MRPL55-233ENST00000495899 PIM2Q9P1W9 311 aa16■□□□□ 0.15
MRPL55-233ENST00000495899 KIF13BQ9NQT8 1826 aa16■□□□□ 0.15
MRPL55-233ENST00000495899 PDE6BP35913 854 aa15.99■□□□□ 0.15
MRPL55-233ENST00000495899 COPS6Q7L5N1 327 aa15.99■□□□□ 0.15
MRPL55-233ENST00000495899 NBPF5PQ86XG9 351 aaPredicted RBP15.99■□□□□ 0.15
MRPL55-233ENST00000495899 ZBTB3Q9H5J0 574 aa15.99■□□□□ 0.15
MRPL55-233ENST00000495899 CHPF2Q9P2E5 772 aa15.99■□□□□ 0.15
MRPL55-233ENST00000495899 H0YIN7 160 aa15.98■□□□□ 0.15
MRPL55-233ENST00000495899 ELL2O00472 640 aaPredicted RBP15.98■□□□□ 0.15
MRPL55-233ENST00000495899 NPHP1O15259 732 aa15.98■□□□□ 0.15
MRPL55-233ENST00000495899 ANXA1P04083 346 aa15.98■□□□□ 0.15
MRPL55-233ENST00000495899 ST5P78524 1137 aa15.98■□□□□ 0.15
MRPL55-233ENST00000495899 XAGE3Q8WTP9 111 aa15.98■□□□□ 0.15
MRPL55-233ENST00000495899 TSR2Q969E8 191 aaKnown RBP15.98■□□□□ 0.15
MRPL55-233ENST00000495899 ATP10DQ9P241 1426 aa15.98■□□□□ 0.15
MRPL55-233ENST00000495899 NRXN2Q9P2S2 1712 aa15.98■□□□□ 0.15
MRPL55-233ENST00000495899 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
MRPL55-233ENST00000495899 CCDC30Q5VVM6 783 aa15.97■□□□□ 0.15
MRPL55-233ENST00000495899 ZNF34Q8IZ26 560 aa15.97■□□□□ 0.15
MRPL55-233ENST00000495899 SPOCK2Q92563 424 aa15.97■□□□□ 0.15
MRPL55-233ENST00000495899 NYXQ9GZU5 481 aa15.97■□□□□ 0.15
MRPL55-233ENST00000495899 ZBTB47Q9UFB7 747 aaPredicted RBP15.97■□□□□ 0.15
MRPL55-233ENST00000495899 BCORQ6W2J9 1755 aa15.97■□□□□ 0.15
MRPL55-233ENST00000495899 GOLGB1Q14789 3259 aaKnown RBP15.96■□□□□ 0.15
MRPL55-233ENST00000495899 YY1P25490 414 aa15.96■□□□□ 0.15
MRPL55-233ENST00000495899 CHRNA5P30532 468 aa15.96■□□□□ 0.15
MRPL55-233ENST00000495899 AIMP1Q12904 312 aaKnown RBP15.96■□□□□ 0.15
MRPL55-233ENST00000495899 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
MRPL55-233ENST00000495899 DALRD3Q5D0E6 543 aaKnown RBP15.96■□□□□ 0.15
MRPL55-233ENST00000495899 C2CD5Q86YS7 1000 aa15.96■□□□□ 0.15
MRPL55-233ENST00000495899 MYH16Q9H6N6 1097 aa15.96■□□□□ 0.15
MRPL55-233ENST00000495899 BCS1LQ9Y276 419 aa15.96■□□□□ 0.15
MRPL55-233ENST00000495899 GOLGA2Q08379 1002 aa15.95■□□□□ 0.14
MRPL55-233ENST00000495899 PARP10Q53GL7 1025 aa15.95■□□□□ 0.14
MRPL55-233ENST00000495899 ANKRD13DQ6ZTN6 518 aa15.95■□□□□ 0.14
MRPL55-233ENST00000495899 TSPYL6Q8N831 410 aa15.95■□□□□ 0.14
MRPL55-233ENST00000495899 PLBD2Q8NHP8 589 aa15.95■□□□□ 0.14
MRPL55-233ENST00000495899 ZNF521Q96K83 1311 aa15.94■□□□□ 0.14
MRPL55-233ENST00000495899 FANCIQ9NVI1 1328 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms