RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 TSGA10IPQ3SY00 556 aa6.06□□□□□ -1.44
R3HDM1-219ENST00000488035 CHIC2Q9UKJ5 165 aa6.06□□□□□ -1.44
R3HDM1-219ENST00000488035 C9orf172C9J069 976 aa6.05□□□□□ -1.44
R3HDM1-219ENST00000488035 M0R082 166 aa6.05□□□□□ -1.44
R3HDM1-219ENST00000488035 NEUROD1Q13562 356 aa6.05□□□□□ -1.44
R3HDM1-219ENST00000488035 ZNF295-AS1Q8N0V1 137 aa6.05□□□□□ -1.44
R3HDM1-219ENST00000488035 ZNF417Q8TAU3 575 aa6.05□□□□□ -1.44
R3HDM1-219ENST00000488035 SLC4A9Q96Q91 983 aa6.05□□□□□ -1.44
R3HDM1-219ENST00000488035 ZNF587Q96SQ5 575 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-219ENST00000488035 CABP1Q9NZU7 370 aa6.05□□□□□ -1.44
R3HDM1-219ENST00000488035 A6NJY4 79 aa6.04□□□□□ -1.44
R3HDM1-219ENST00000488035 TXKP42681 527 aa6.04□□□□□ -1.44
R3HDM1-219ENST00000488035 STRN4Q9NRL3 753 aa6.04□□□□□ -1.44
R3HDM1-219ENST00000488035 NID1P14543 1247 aa6.03□□□□□ -1.44
R3HDM1-219ENST00000488035 YBX3P16989 372 aaKnown RBP eCLIP6.03□□□□□ -1.44
R3HDM1-219ENST00000488035 MBTPS1Q14703 1052 aa6.03□□□□□ -1.44
R3HDM1-219ENST00000488035 MTFR1Q15390 333 aa6.03□□□□□ -1.44
R3HDM1-219ENST00000488035 TNFRSF25Q93038 417 aa6.03□□□□□ -1.44
R3HDM1-219ENST00000488035 SSBP4Q9BWG4 385 aaPredicted RBP6.03□□□□□ -1.44
R3HDM1-219ENST00000488035 NEUROD4Q9HD90 331 aa6.03□□□□□ -1.44
R3HDM1-219ENST00000488035 SERTAD1Q9UHV2 236 aa6.03□□□□□ -1.44
R3HDM1-219ENST00000488035 IQSEC3Q9UPP2 1182 aaPredicted RBP6.03□□□□□ -1.44
R3HDM1-219ENST00000488035 STARD13Q9Y3M8 1113 aa6.03□□□□□ -1.44
R3HDM1-219ENST00000488035 FAM229AH3BQW9 127 aa6.02□□□□□ -1.45
R3HDM1-219ENST00000488035 BACH1O14867 736 aa6.02□□□□□ -1.45
R3HDM1-219ENST00000488035 MICALL1Q8N3F8 863 aa6.02□□□□□ -1.45
R3HDM1-219ENST00000488035 RNF112Q9ULX5 631 aa6.02□□□□□ -1.45
R3HDM1-219ENST00000488035 GPC6Q9Y625 555 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-219ENST00000488035 PAX4O43316 350 aa6.01□□□□□ -1.45
R3HDM1-219ENST00000488035 ELNP15502 786 aa6.01□□□□□ -1.45
R3HDM1-219ENST00000488035 NRG1Q02297 640 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-219ENST00000488035 TXNRD3Q86VQ6 643 aa6.01□□□□□ -1.45
R3HDM1-219ENST00000488035 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
R3HDM1-219ENST00000488035 SNRKQ9NRH2 765 aa6.01□□□□□ -1.45
R3HDM1-219ENST00000488035 SELPP16109 830 aa6□□□□□ -1.45
R3HDM1-219ENST00000488035 GRIK4Q16099 956 aa6□□□□□ -1.45
R3HDM1-219ENST00000488035 TRAPPC3LQ5T215 181 aa6□□□□□ -1.45
R3HDM1-219ENST00000488035 C20orf204Q6ZNR8 217 aa6□□□□□ -1.45
R3HDM1-219ENST00000488035 PLPP7Q8NBV4 271 aa6□□□□□ -1.45
R3HDM1-219ENST00000488035 LENG1Q96BZ8 264 aaPredicted RBP6□□□□□ -1.45
R3HDM1-219ENST00000488035 TMEM229AB2RXF0 380 aa5.99□□□□□ -1.45
R3HDM1-219ENST00000488035 LILRB5O75023 590 aa5.99□□□□□ -1.45
R3HDM1-219ENST00000488035 COBLO75128 1261 aa5.99□□□□□ -1.45
R3HDM1-219ENST00000488035 ALBP02768 609 aa5.99□□□□□ -1.45
R3HDM1-219ENST00000488035 ADH7P40394 386 aa5.99□□□□□ -1.45
R3HDM1-219ENST00000488035 LRRC69Q6ZNQ3 347 aa5.99□□□□□ -1.45
R3HDM1-219ENST00000488035 ILDR2Q71H61 639 aa5.99□□□□□ -1.45
R3HDM1-219ENST00000488035 RAC1P63000 192 aa5.98□□□□□ -1.45
R3HDM1-219ENST00000488035 SPEM2Q0P670 501 aa5.98□□□□□ -1.45
R3HDM1-219ENST00000488035 TEAD4Q15561 434 aa5.98□□□□□ -1.45
R3HDM1-219ENST00000488035 TBC1D2BQ9UPU7 963 aa5.98□□□□□ -1.45
R3HDM1-219ENST00000488035 PARP3Q9Y6F1 533 aa5.98□□□□□ -1.45
R3HDM1-219ENST00000488035 TXLNAP40222 546 aa5.97□□□□□ -1.45
R3HDM1-219ENST00000488035 C8orf86Q6ZUL3 223 aa5.97□□□□□ -1.45
R3HDM1-219ENST00000488035 C14orf37Q86TY3 774 aa5.97□□□□□ -1.45
R3HDM1-219ENST00000488035 L3MBTL2Q969R5 705 aa5.97□□□□□ -1.45
R3HDM1-219ENST00000488035 SCHIP1Q9P0W5 487 aaPredicted RBP5.97□□□□□ -1.45
R3HDM1-219ENST00000488035 USP3Q9Y6I4 520 aa5.97□□□□□ -1.45
R3HDM1-219ENST00000488035 EML1O00423 815 aa5.96□□□□□ -1.46
R3HDM1-219ENST00000488035 NOS2P35228 1153 aa5.96□□□□□ -1.46
R3HDM1-219ENST00000488035 SFSWAPQ12872 951 aaKnown RBP5.96□□□□□ -1.46
R3HDM1-219ENST00000488035 SEMA3FQ13275 785 aa5.96□□□□□ -1.46
R3HDM1-219ENST00000488035 SLC51AQ86UW1 340 aa5.96□□□□□ -1.46
R3HDM1-219ENST00000488035 SLC30A3Q99726 388 aa5.96□□□□□ -1.46
R3HDM1-219ENST00000488035 KRTAP4-2Q9BYR5 136 aa5.96□□□□□ -1.46
R3HDM1-219ENST00000488035 ZNF232Q9UNY5 417 aa5.96□□□□□ -1.46
R3HDM1-219ENST00000488035 A0A0A0MRY4 1105 aa5.95□□□□□ -1.46
R3HDM1-219ENST00000488035 SOX11P35716 441 aa5.95□□□□□ -1.46
R3HDM1-219ENST00000488035 IRF5Q13568 498 aa5.95□□□□□ -1.46
R3HDM1-219ENST00000488035 WASHC4Q2M389 1173 aa5.95□□□□□ -1.46
R3HDM1-219ENST00000488035 TP53INP1Q96A56 240 aa5.95□□□□□ -1.46
R3HDM1-219ENST00000488035 ANKIB1Q9P2G1 1089 aa5.95□□□□□ -1.46
R3HDM1-219ENST00000488035 PCDHGA11Q9Y5H2 935 aa5.95□□□□□ -1.46
R3HDM1-219ENST00000488035 LZTS3O60299 673 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-219ENST00000488035 KCNQ4P56696 695 aa5.94□□□□□ -1.46
R3HDM1-219ENST00000488035 VAC14Q08AM6 782 aa5.94□□□□□ -1.46
R3HDM1-219ENST00000488035 ZDHHC1Q8WTX9 485 aa5.94□□□□□ -1.46
R3HDM1-219ENST00000488035 USP21Q9UK80 565 aa5.94□□□□□ -1.46
R3HDM1-219ENST00000488035 NOD1Q9Y239 953 aa5.94□□□□□ -1.46
R3HDM1-219ENST00000488035 SERTM1A2A2V5 107 aa5.93□□□□□ -1.46
R3HDM1-219ENST00000488035 MCM6Q14566 821 aa5.93□□□□□ -1.46
R3HDM1-219ENST00000488035 EML3Q32P44 896 aa5.93□□□□□ -1.46
R3HDM1-219ENST00000488035 RHPN1Q8TCX5 695 aa5.93□□□□□ -1.46
R3HDM1-219ENST00000488035 CEP63Q96MT8 703 aa5.93□□□□□ -1.46
R3HDM1-219ENST00000488035 EFCC1Q9HA90 598 aa5.93□□□□□ -1.46
R3HDM1-219ENST00000488035 BRD7Q9NPI1 651 aa5.93□□□□□ -1.46
R3HDM1-219ENST00000488035 KCNH4Q9UQ05 1017 aa5.93□□□□□ -1.46
R3HDM1-219ENST00000488035 PSME1Q06323 249 aa5.92□□□□□ -1.46
R3HDM1-219ENST00000488035 FZD5Q13467 585 aa5.92□□□□□ -1.46
R3HDM1-219ENST00000488035 C1orf53Q5VUE5 145 aa5.92□□□□□ -1.46
R3HDM1-219ENST00000488035 SLC9A9Q8IVB4 645 aa5.92□□□□□ -1.46
R3HDM1-219ENST00000488035 C7orf43Q8WVR3 580 aa5.92□□□□□ -1.46
R3HDM1-219ENST00000488035 CHMP3Q9Y3E7 222 aa5.92□□□□□ -1.46
R3HDM1-219ENST00000488035 GTF2IP78347 998 aa5.91□□□□□ -1.46
R3HDM1-219ENST00000488035 RAB44Q7Z6P3 723 aaPredicted RBP5.91□□□□□ -1.46
R3HDM1-219ENST00000488035 UBE2OQ9C0C9 1292 aaKnown RBP5.91□□□□□ -1.46
R3HDM1-219ENST00000488035 JPH1Q9HDC5 661 aaPredicted RBP5.91□□□□□ -1.46
R3HDM1-219ENST00000488035 ZNF358Q9NW07 568 aa5.91□□□□□ -1.46
R3HDM1-219ENST00000488035 TBC1D8BQ0IIM8 1120 aa5.9□□□□□ -1.46
R3HDM1-219ENST00000488035 SHISA2Q6UWI4 295 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms