RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 PDE3BQ13370 1112 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 ENOX2Q16206 610 aaKnown RBP5.07□□□□□ -1.6
GPNMB-212ENST00000487890 CYB5RLQ6IPT4 315 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 POTEAQ6S8J7 498 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 ETFBKMTQ8IXQ9 262 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 GJD3Q8N144 294 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 MPNDQ8N594 471 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 ABTB2Q8N961 1025 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 KDF1Q8NAX2 398 aaPredicted RBP5.07□□□□□ -1.6
GPNMB-212ENST00000487890 ZDHHC1Q8WTX9 485 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 CNKSR1Q969H4 720 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 MRS2Q9HD23 443 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 SYNJ1O43426 1573 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 GAPVD1Q14C86 1478 aa5.07□□□□□ -1.6
GPNMB-212ENST00000487890 PNMA6FA0A0J9YX94 578 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 SERTM1A2A2V5 107 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 ADH1CP00326 375 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 MZF1P28698 734 aaPredicted RBP5.06□□□□□ -1.6
GPNMB-212ENST00000487890 NOS2P35228 1153 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 FANCCQ00597 558 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 KCNC4Q03721 635 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 DNM1Q05193 864 aaKnown RBP5.06□□□□□ -1.6
GPNMB-212ENST00000487890 NR5A1Q13285 461 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 TLR1Q15399 786 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 TEAD4Q15561 434 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 C11orf91Q3C1V1 193 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 ZNF295-AS1Q8N0V1 137 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 UBXN4Q92575 508 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 EDEM1Q92611 657 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 TRIM52Q96A61 297 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 CFHR5Q9BXR6 569 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 KLK14Q9P0G3 267 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 VTI1BQ9UEU0 232 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 PARP3Q9Y6F1 533 aa5.06□□□□□ -1.6
GPNMB-212ENST00000487890 WRNQ14191 1432 aaPredicted RBP eCLIP5.06□□□□□ -1.6
GPNMB-212ENST00000487890 TOP2BQ02880 1626 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 ABCA5Q8WWZ7 1642 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 BIVM-ERCC5R4GMW8 1640 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 CD2BP2O95400 341 aaKnown RBP5.05□□□□□ -1.6
GPNMB-212ENST00000487890 PDGFAP04085 211 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 FGD1P98174 961 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 ATP2B2Q01814 1243 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 DGKZQ13574 1117 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 SF3A1Q15459 793 aaKnown RBP5.05□□□□□ -1.6
GPNMB-212ENST00000487890 LIAT1Q6ZQX7 453 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 ALDH16A1Q8IZ83 802 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 RNF34Q969K3 372 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 EMID1Q96A84 441 aaPredicted RBP5.05□□□□□ -1.6
GPNMB-212ENST00000487890 IFT43Q96FT9 208 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 ESYT1Q9BSJ8 1104 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 ABCA10Q8WWZ4 1543 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 SYNJ2O15056 1496 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 ARAP1Q96P48 1450 aa5.05□□□□□ -1.6
GPNMB-212ENST00000487890 SMARCA5O60264 1052 aaPredicted RBP5.04□□□□□ -1.6
GPNMB-212ENST00000487890 HSP90B1P14625 803 aaKnown RBP5.04□□□□□ -1.6
GPNMB-212ENST00000487890 ZAP70P43403 619 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 HIRAP54198 1017 aaPredicted RBP5.04□□□□□ -1.6
GPNMB-212ENST00000487890 CENPCQ03188 943 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 CBLBQ13191 982 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 RTN1Q16799 776 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 ALG1LQ6GMV1 187 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 PPP1R18Q6NYC8 613 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 CDAN1Q8IWY9 1227 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 L3MBTL2Q969R5 705 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 TINF2Q9BSI4 451 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 FHDC1Q9C0D6 1143 aaPredicted RBP5.04□□□□□ -1.6
GPNMB-212ENST00000487890 TGIF2Q9GZN2 237 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 GGNBP2Q9H3C7 697 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.04□□□□□ -1.6
GPNMB-212ENST00000487890 METTL5Q9NRN9 209 aaKnown RBP5.04□□□□□ -1.6
GPNMB-212ENST00000487890 PGPEP1Q9NXJ5 209 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 CABP1Q9NZU7 370 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 ZNF232Q9UNY5 417 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 CHMP3Q9Y3E7 222 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 EMILIN1Q9Y6C2 1016 aa5.04□□□□□ -1.6
GPNMB-212ENST00000487890 CLASP1Q7Z460 1538 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 A6NHS1 94 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 ITGBL1O95965 494 aaPredicted RBP5.03□□□□□ -1.6
GPNMB-212ENST00000487890 ADH1AP07327 375 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 CTSHP09668 335 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 ZNF76P36508 570 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 GGCXP38435 758 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 CLN3Q13286 438 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 ORC1Q13415 861 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 GPR152Q8TDT2 470 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 MRGPRX2Q96LB1 330 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 CSRNP1Q96S65 589 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 PHACTR1Q9C0D0 580 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 ACBD3Q9H3P7 528 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 CAPN10Q9HC96 672 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 ADAMTS12P58397 1594 aa5.03□□□□□ -1.6
GPNMB-212ENST00000487890 HMGB1P09429 215 aaKnown RBP5.02□□□□□ -1.61
GPNMB-212ENST00000487890 GNA15P30679 374 aa5.02□□□□□ -1.61
GPNMB-212ENST00000487890 PTGIRP43119 386 aa5.02□□□□□ -1.61
GPNMB-212ENST00000487890 USP5P45974 858 aa5.02□□□□□ -1.61
GPNMB-212ENST00000487890 TNNI2P48788 182 aa5.02□□□□□ -1.61
GPNMB-212ENST00000487890 TREML1Q86YW5 311 aa5.02□□□□□ -1.61
GPNMB-212ENST00000487890 SLC43A3Q8NBI5 491 aa5.02□□□□□ -1.61
GPNMB-212ENST00000487890 NUDT16Q96DE0 195 aaKnown RBP5.02□□□□□ -1.61
GPNMB-212ENST00000487890 AGBL1Q96MI9 1066 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms