RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 SLC19A1P41440 591 aa6.77□□□□□ -1.33
R3HDM1-216ENST00000483065 TSHZ1Q6ZSZ6 1077 aa6.77□□□□□ -1.33
R3HDM1-216ENST00000483065 MTRQ99707 1265 aa6.77□□□□□ -1.33
R3HDM1-216ENST00000483065 HSP90AA1P07900 732 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-216ENST00000483065 TBX4P57082 545 aa6.76□□□□□ -1.33
R3HDM1-216ENST00000483065 CHMP4BP1P59074 171 aa6.76□□□□□ -1.33
R3HDM1-216ENST00000483065 HDAC1Q13547 482 aaPredicted RBP6.76□□□□□ -1.33
R3HDM1-216ENST00000483065 PDXDC2PQ6P474 469 aa6.76□□□□□ -1.33
R3HDM1-216ENST00000483065 LRP10Q7Z4F1 713 aa6.76□□□□□ -1.33
R3HDM1-216ENST00000483065 ZNF598Q86UK7 904 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-216ENST00000483065 JDP2Q8WYK2 163 aa6.76□□□□□ -1.33
R3HDM1-216ENST00000483065 C8orf48Q96LL4 319 aa6.76□□□□□ -1.33
R3HDM1-216ENST00000483065 ADAM33Q9BZ11 813 aa6.76□□□□□ -1.33
R3HDM1-216ENST00000483065 BSDC1Q9NW68 430 aaPredicted RBP6.76□□□□□ -1.33
R3HDM1-216ENST00000483065 ZBTB7BO15156 539 aaPredicted RBP6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 ZBTB24O43167 697 aaPredicted RBP6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 GDF9O60383 454 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 ATF4P18848 351 aaPredicted RBP6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 GGCXP38435 758 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 GJA8P48165 433 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 PTPN12Q05209 780 aaKnown RBP6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 MTMR3Q13615 1198 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 NBPF14Q5TI25 921 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 SPRYD7Q5W111 196 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 FMNL3Q8IVF7 1028 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 EMID1Q96A84 441 aaPredicted RBP6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 SRPK1Q96SB4 655 aaKnown RBP6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 TRIM55Q9BYV6 548 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 G3BP2Q9UN86 482 aaKnown RBP6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 SPG7Q9UQ90 795 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 EMILIN1Q9Y6C2 1016 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 COMMD10Q9Y6G5 202 aa6.75□□□□□ -1.33
R3HDM1-216ENST00000483065 SFI1A8K8P3 1242 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 TRIM6-TRIM34B2RNG4 842 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 CDC45O75419 566 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 GDF11O95390 407 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 PDGFRBP09619 1106 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 USP5P45974 858 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 USP4Q13107 963 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 PROX2Q3B8N5 592 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 C4orf46Q504U0 113 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 OXLD1Q5BKU9 147 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 ZNF516Q92618 1163 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 HLA-CQ95604 372 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 SEC16BQ96JE7 1060 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 GABBR1Q9UBS5 961 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 FAM198AQ9UFP1 575 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 TSKSQ9UJT2 592 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 R3HCC1Q9Y3T6 440 aaKnown RBP6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 AK5Q9Y6K8 562 aa6.74□□□□□ -1.33
R3HDM1-216ENST00000483065 KIF3BO15066 747 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 DKK1O94907 266 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 IGFBP4P22692 258 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 RHBDL3P58872 404 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 FKBP5Q13451 457 aaPredicted RBP6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 SAFB2Q14151 953 aaKnown RBP eCLIP6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 ENOX2Q16206 610 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 ODR4Q5SWX8 454 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 ZFYVE27Q5T4F4 411 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 GAS2L2Q8NHY3 880 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 APPBP2Q92624 585 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 GPRASP2Q96D09 838 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 RPS6KC1Q96S38 1066 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 FAM129BQ96TA1 746 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 GGT7Q9UJ14 662 aa6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 LAS1LQ9Y4W2 734 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-216ENST00000483065 TNFRSF10AO00220 468 aa6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 NR1I2O75469 434 aa6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 EIF4BP23588 611 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 MPSTP25325 297 aa6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 IRX6P78412 446 aaPredicted RBP6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 FUT2Q10981 343 aa6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 FERMT3Q86UX7 667 aa6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 HOMER1Q86YM7 354 aa6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 RPUSD2Q8IZ73 545 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 ABTB2Q8N961 1025 aa6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 TRIM52Q96A61 297 aa6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 STRIP2Q9ULQ0 834 aa6.72□□□□□ -1.33
R3HDM1-216ENST00000483065 GIPC1O14908 333 aa6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 APLP1P51693 650 aa6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 SERINC3Q13530 473 aa6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 HLTFQ14527 1009 aaKnown RBP eCLIP6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 NAA30Q147X3 362 aaPredicted RBP6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 ZRSR2Q15696 482 aaKnown RBP6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 KMT5BQ4FZB7 885 aa6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 ZNF394Q53GI3 561 aa6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 NKX2-3Q8TAU0 364 aa6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 LRCH3Q96II8 777 aa6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 SCYL1Q96KG9 808 aa6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 RNPC3Q96LT9 517 aaKnown RBP6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 NAP1L4Q99733 375 aaKnown RBP6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 KIAA1024Q9UPX6 916 aa6.71□□□□□ -1.34
R3HDM1-216ENST00000483065 PNMA6FA0A0J9YX94 578 aa6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 AXIN1O15169 862 aa6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 CAND2O75155 1236 aa6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 GIGYF1O75420 1035 aaPredicted RBP6.7□□□□□ -1.34
R3HDM1-216ENST00000483065 SNRPBP14678 240 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms