RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 BICDL1Q6ZP65 573 aa11.36□□□□□ -0.59
SNX4-205ENST00000482965 ZNF652Q9Y2D9 606 aa11.36□□□□□ -0.59
SNX4-205ENST00000482965 NUP98P52948 1817 aa11.35□□□□□ -0.59
SNX4-205ENST00000482965 KIF13BQ9NQT8 1826 aa11.35□□□□□ -0.59
SNX4-205ENST00000482965 ELL2O00472 640 aaPredicted RBP11.35□□□□□ -0.59
SNX4-205ENST00000482965 ANXA1P04083 346 aa11.35□□□□□ -0.59
SNX4-205ENST00000482965 TM4SF1P30408 202 aa11.35□□□□□ -0.59
SNX4-205ENST00000482965 KIF6Q6ZMV9 814 aa11.35□□□□□ -0.59
SNX4-205ENST00000482965 C8orf58Q8NAV2 365 aa11.35□□□□□ -0.59
SNX4-205ENST00000482965 CD2APQ9Y5K6 639 aa11.35□□□□□ -0.59
SNX4-205ENST00000482965 POLRMTO00411 1230 aaKnown RBP11.34□□□□□ -0.59
SNX4-205ENST00000482965 ATXN8OSP0DMR3 200 aa11.34□□□□□ -0.59
SNX4-205ENST00000482965 PDIA6Q15084 440 aa11.34□□□□□ -0.59
SNX4-205ENST00000482965 PROSER3Q2NL68 480 aa11.34□□□□□ -0.59
SNX4-205ENST00000482965 TBC1D9BQ66K14 1250 aa11.34□□□□□ -0.59
SNX4-205ENST00000482965 TTLL7Q6ZT98 887 aa11.34□□□□□ -0.59
SNX4-205ENST00000482965 NLGN2Q8NFZ4 835 aa11.34□□□□□ -0.59
SNX4-205ENST00000482965 DDX21Q9NR30 783 aaKnown RBP eCLIP11.34□□□□□ -0.59
SNX4-205ENST00000482965 CHPF2Q9P2E5 772 aa11.34□□□□□ -0.59
SNX4-205ENST00000482965 C10orf71Q711Q0 1435 aa11.34□□□□□ -0.59
SNX4-205ENST00000482965 MAP3K15Q6ZN16 1313 aa11.34□□□□□ -0.59
SNX4-205ENST00000482965 FANCIQ9NVI1 1328 aa11.34□□□□□ -0.59
SNX4-205ENST00000482965 NRXN2Q9P2S2 1712 aa11.33□□□□□ -0.6
SNX4-205ENST00000482965 SRCAPQ6ZRS2 3230 aa11.33□□□□□ -0.6
SNX4-205ENST00000482965 SERPINB2P05120 415 aa11.33□□□□□ -0.6
SNX4-205ENST00000482965 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
SNX4-205ENST00000482965 CLEC4GQ6UXB4 293 aa11.33□□□□□ -0.6
SNX4-205ENST00000482965 SETDB2Q96T68 719 aa11.33□□□□□ -0.6
SNX4-205ENST00000482965 CHMP4AQ9BY43 222 aa11.33□□□□□ -0.6
SNX4-205ENST00000482965 MYH16Q9H6N6 1097 aa11.33□□□□□ -0.6
SNX4-205ENST00000482965 DBF4Q9UBU7 674 aaPredicted RBP11.33□□□□□ -0.6
SNX4-205ENST00000482965 CARMIL3Q8ND23 1372 aa11.32□□□□□ -0.6
SNX4-205ENST00000482965 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
SNX4-205ENST00000482965 ERVV-1B6SEH8 477 aa11.32□□□□□ -0.6
SNX4-205ENST00000482965 RGL2O15211 777 aa11.32□□□□□ -0.6
SNX4-205ENST00000482965 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
SNX4-205ENST00000482965 HLFQ16534 295 aa11.32□□□□□ -0.6
SNX4-205ENST00000482965 TWISTNBQ3B726 338 aaPredicted RBP11.32□□□□□ -0.6
SNX4-205ENST00000482965 LRP10Q7Z4F1 713 aa11.32□□□□□ -0.6
SNX4-205ENST00000482965 TSPYL6Q8N831 410 aa11.32□□□□□ -0.6
SNX4-205ENST00000482965 XAGE3Q8WTP9 111 aa11.32□□□□□ -0.6
SNX4-205ENST00000482965 ZBTB3Q9H5J0 574 aa11.32□□□□□ -0.6
SNX4-205ENST00000482965 CACNA1FO60840 1977 aa11.32□□□□□ -0.6
SNX4-205ENST00000482965 ZNF521Q96K83 1311 aa11.32□□□□□ -0.6
SNX4-205ENST00000482965 NPHP1O15259 732 aa11.31□□□□□ -0.6
SNX4-205ENST00000482965 CCDC30Q5VVM6 783 aa11.31□□□□□ -0.6
SNX4-205ENST00000482965 COPS6Q7L5N1 327 aa11.31□□□□□ -0.6
SNX4-205ENST00000482965 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
SNX4-205ENST00000482965 HYPKQ9NX55 129 aa11.31□□□□□ -0.6
SNX4-205ENST00000482965 NIP7Q9Y221 180 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNX4-205ENST00000482965 ANKRD36CQ5JPF3 1778 aa11.31□□□□□ -0.6
SNX4-205ENST00000482965 KIAA1551Q9HCM1 1747 aa11.3□□□□□ -0.6
SNX4-205ENST00000482965 TGFB2P61812 414 aa11.3□□□□□ -0.6
SNX4-205ENST00000482965 EXOSC9Q06265 439 aaKnown RBP11.3□□□□□ -0.6
SNX4-205ENST00000482965 ATP10DQ9P241 1426 aa11.29□□□□□ -0.6
SNX4-205ENST00000482965 E9PSI1 815 aa11.29□□□□□ -0.6
SNX4-205ENST00000482965 GPR162Q16538 588 aa11.29□□□□□ -0.6
SNX4-205ENST00000482965 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
SNX4-205ENST00000482965 NBPF5PQ86XG9 351 aaPredicted RBP11.29□□□□□ -0.6
SNX4-205ENST00000482965 CNBD1Q8NA66 436 aa11.29□□□□□ -0.6
SNX4-205ENST00000482965 STK31Q9BXU1 1019 aa11.29□□□□□ -0.6
SNX4-205ENST00000482965 PXDNLA1KZ92 1463 aa11.29□□□□□ -0.6
SNX4-205ENST00000482965 ANKRD31Q8N7Z5 1873 aa11.29□□□□□ -0.6
SNX4-205ENST00000482965 A0A0G2JLW4 131 aa11.28□□□□□ -0.6
SNX4-205ENST00000482965 FAM177BA6PVY3 158 aa11.28□□□□□ -0.6
SNX4-205ENST00000482965 TCERG1O14776 1098 aaKnown RBP11.28□□□□□ -0.6
SNX4-205ENST00000482965 DPEP1P16444 411 aa11.28□□□□□ -0.6
SNX4-205ENST00000482965 GPTP24298 496 aa11.28□□□□□ -0.6
SNX4-205ENST00000482965 ST5P78524 1137 aa11.28□□□□□ -0.6
SNX4-205ENST00000482965 HSP90AB3PQ58FF7 597 aa11.28□□□□□ -0.6
SNX4-205ENST00000482965 PRR5LQ6MZQ0 368 aa11.28□□□□□ -0.6
SNX4-205ENST00000482965 CCDC24Q8N4L8 307 aa11.28□□□□□ -0.6
SNX4-205ENST00000482965 WWC3Q9ULE0 1092 aa11.28□□□□□ -0.6
SNX4-205ENST00000482965 ARFGEF2Q9Y6D5 1785 aa11.28□□□□□ -0.6
SNX4-205ENST00000482965 BRCA1P38398 1863 aaKnown RBP11.27□□□□□ -0.6
SNX4-205ENST00000482965 VAMP4O75379 141 aa11.27□□□□□ -0.61
SNX4-205ENST00000482965 GTF2E1P29083 439 aaPredicted RBP11.27□□□□□ -0.61
SNX4-205ENST00000482965 HNRNPUQ00839 825 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNX4-205ENST00000482965 SLFN5Q08AF3 891 aa11.27□□□□□ -0.61
SNX4-205ENST00000482965 TPTE2Q6XPS3 522 aa11.27□□□□□ -0.61
SNX4-205ENST00000482965 ANKRD13DQ6ZTN6 518 aa11.27□□□□□ -0.61
SNX4-205ENST00000482965 PLBD2Q8NHP8 589 aa11.27□□□□□ -0.61
SNX4-205ENST00000482965 PHAXQ9H814 394 aaKnown RBP11.27□□□□□ -0.61
SNX4-205ENST00000482965 DLEC1Q9Y238 1755 aa11.26□□□□□ -0.61
SNX4-205ENST00000482965 DDX58O95786 925 aaKnown RBP11.26□□□□□ -0.61
SNX4-205ENST00000482965 CHRNA5P30532 468 aa11.26□□□□□ -0.61
SNX4-205ENST00000482965 PARP10Q53GL7 1025 aa11.26□□□□□ -0.61
SNX4-205ENST00000482965 RIC3Q7Z5B4 369 aa11.26□□□□□ -0.61
SNX4-205ENST00000482965 ZNF34Q8IZ26 560 aa11.26□□□□□ -0.61
SNX4-205ENST00000482965 CDCA7LQ96GN5 454 aa11.26□□□□□ -0.61
SNX4-205ENST00000482965 BRIP1Q9BX63 1249 aa11.26□□□□□ -0.61
SNX4-205ENST00000482965 NYXQ9GZU5 481 aa11.26□□□□□ -0.61
SNX4-205ENST00000482965 UBN2Q6ZU65 1347 aa11.26□□□□□ -0.61
SNX4-205ENST00000482965 CHD4Q14839 1912 aa11.25□□□□□ -0.61
SNX4-205ENST00000482965 YBX3P16989 372 aaKnown RBP eCLIP11.25□□□□□ -0.61
SNX4-205ENST00000482965 PDE6BP35913 854 aa11.25□□□□□ -0.61
SNX4-205ENST00000482965 TCIRG1Q13488 830 aa11.25□□□□□ -0.61
SNX4-205ENST00000482965 PPP1R42Q7Z4L9 355 aa11.25□□□□□ -0.61
SNX4-205ENST00000482965 C2CD5Q86YS7 1000 aa11.25□□□□□ -0.61
SNX4-205ENST00000482965 PIM2Q9P1W9 311 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms