RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.82□□□□□ -0.84
RBM39-233ENST00000482563 CDC45O75419 566 aa9.81□□□□□ -0.84
RBM39-233ENST00000482563 ANKS3Q6ZW76 656 aa9.81□□□□□ -0.84
RBM39-233ENST00000482563 SH3RF1Q7Z6J0 888 aa9.81□□□□□ -0.84
RBM39-233ENST00000482563 DEPDC7Q96QD5 511 aa9.81□□□□□ -0.84
RBM39-233ENST00000482563 PSDA5PKW4 1024 aaPredicted RBP9.8□□□□□ -0.84
RBM39-233ENST00000482563 RNF40O75150 1001 aa9.8□□□□□ -0.84
RBM39-233ENST00000482563 GYS2P54840 703 aa9.8□□□□□ -0.84
RBM39-233ENST00000482563 KIAA0907Q7Z7F0 614 aaPredicted RBP9.8□□□□□ -0.84
RBM39-233ENST00000482563 CCAR1Q8IX12 1150 aaKnown RBP9.8□□□□□ -0.84
RBM39-233ENST00000482563 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
RBM39-233ENST00000482563 QTRT2Q9H974 415 aaKnown RBP9.8□□□□□ -0.84
RBM39-233ENST00000482563 RABGEF1Q9UJ41 708 aa9.8□□□□□ -0.84
RBM39-233ENST00000482563 PRC1O43663 620 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 RAB33AQ14088 237 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 FAM98CQ17RN3 349 aaKnown RBP9.79□□□□□ -0.84
RBM39-233ENST00000482563 NBPF20Q3BBV1 942 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 LILRB2Q8N423 598 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 SEC16BQ96JE7 1060 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 NUDT12Q9BQG2 462 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 OSBPL7Q9BZF2 842 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 UBA5Q9GZZ9 404 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 MRVI1Q9Y6F6 885 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 EIF1AYO14602 144 aaKnown RBP9.79□□□□□ -0.84
RBM39-233ENST00000482563 SSBP05455 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
RBM39-233ENST00000482563 PAX3P23760 479 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 SCNN1DP51172 638 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 ERFEQ4G0M1 354 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 TSHZ1Q6ZSZ6 1077 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 RPS6KC1Q96S38 1066 aa9.79□□□□□ -0.84
RBM39-233ENST00000482563 ESYT3A0FGR9 886 aa9.78□□□□□ -0.84
RBM39-233ENST00000482563 SCTRP47872 440 aa9.78□□□□□ -0.84
RBM39-233ENST00000482563 NFX1Q12986 1120 aaKnown RBP9.78□□□□□ -0.84
RBM39-233ENST00000482563 ZSWIM6Q9HCJ5 1215 aa9.78□□□□□ -0.84
RBM39-233ENST00000482563 TERF2IPQ9NYB0 399 aa9.78□□□□□ -0.84
RBM39-233ENST00000482563 SPG7Q9UQ90 795 aa9.78□□□□□ -0.84
RBM39-233ENST00000482563 MAGEB6P1A0A0J9YX57 407 aa9.77□□□□□ -0.85
RBM39-233ENST00000482563 DXOO77932 396 aaKnown RBP9.77□□□□□ -0.85
RBM39-233ENST00000482563 NASPP49321 788 aaPredicted RBP9.77□□□□□ -0.85
RBM39-233ENST00000482563 BIRC2Q13490 618 aa9.77□□□□□ -0.85
RBM39-233ENST00000482563 PI16Q6UXB8 463 aa9.77□□□□□ -0.85
RBM39-233ENST00000482563 PGBD3Q8N328 593 aa9.77□□□□□ -0.85
RBM39-233ENST00000482563 HNRNPLLQ8WVV9 542 aaKnown RBP9.77□□□□□ -0.85
RBM39-233ENST00000482563 MASP1P48740 699 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 APLP1P51693 650 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 CHMP4BP1P59074 171 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 TAF1CQ15572 869 aaPredicted RBP9.76□□□□□ -0.85
RBM39-233ENST00000482563 FOXD4L6Q3SYB3 417 aaPredicted RBP9.76□□□□□ -0.85
RBM39-233ENST00000482563 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.76□□□□□ -0.85
RBM39-233ENST00000482563 C4orf46Q504U0 113 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 FOXD4L3Q6VB84 417 aaPredicted RBP9.76□□□□□ -0.85
RBM39-233ENST00000482563 SCUBE3Q8IX30 993 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 C8orf48Q96LL4 319 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 CNTN3Q9P232 1028 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 PDGFAP04085 211 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 DNM1Q05193 864 aaKnown RBP9.76□□□□□ -0.85
RBM39-233ENST00000482563 DOK7Q18PE1 504 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 MAP9Q49MG5 647 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 FERMT3Q86UX7 667 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 TSR2Q969E8 191 aaKnown RBP9.76□□□□□ -0.85
RBM39-233ENST00000482563 C2orf49Q9BVC5 232 aaPredicted RBP9.76□□□□□ -0.85
RBM39-233ENST00000482563 SLKQ9H2G2 1235 aaPredicted RBP9.76□□□□□ -0.85
RBM39-233ENST00000482563 EID1Q9Y6B2 187 aa9.76□□□□□ -0.85
RBM39-233ENST00000482563 C4orf48Q5BLP8 95 aa9.75□□□□□ -0.85
RBM39-233ENST00000482563 SLC39A7Q92504 469 aa9.75□□□□□ -0.85
RBM39-233ENST00000482563 EDEM1Q92611 657 aa9.75□□□□□ -0.85
RBM39-233ENST00000482563 TBCELQ5QJ74 424 aa9.74□□□□□ -0.85
RBM39-233ENST00000482563 PTCRAQ6ISU1 281 aaPredicted RBP9.74□□□□□ -0.85
RBM39-233ENST00000482563 ETFBKMTQ8IXQ9 262 aa9.74□□□□□ -0.85
RBM39-233ENST00000482563 ABTB2Q8N961 1025 aa9.74□□□□□ -0.85
RBM39-233ENST00000482563 APPBP2Q92624 585 aa9.74□□□□□ -0.85
RBM39-233ENST00000482563 TRIM55Q9BYV6 548 aa9.74□□□□□ -0.85
RBM39-233ENST00000482563 KBTBD4Q9NVX7 518 aa9.74□□□□□ -0.85
RBM39-233ENST00000482563 PPP1R12BO60237 982 aaPredicted RBP9.73□□□□□ -0.85
RBM39-233ENST00000482563 HCLS1P14317 486 aaPredicted RBP9.73□□□□□ -0.85
RBM39-233ENST00000482563 EVA1CP58658 441 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 ARSHQ5FYA8 562 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 NME8Q8N427 588 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 GEMIN8Q9NWZ8 242 aaKnown RBP9.73□□□□□ -0.85
RBM39-233ENST00000482563 CCDC85CA6NKD9 419 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 ST13P50502 369 aaKnown RBP9.73□□□□□ -0.85
RBM39-233ENST00000482563 TKFCQ3LXA3 575 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 LRP10Q7Z4F1 713 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 FAM160A2Q8N612 972 aaPredicted RBP9.73□□□□□ -0.85
RBM39-233ENST00000482563 SLC39A13Q96H72 371 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 DNAJC7Q99615 494 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 MAF1Q9H063 256 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 UNC93B1Q9H1C4 597 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 TMX1Q9H3N1 280 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 ADAMTS1Q9UHI8 967 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 EFR3BQ9Y2G0 817 aa9.73□□□□□ -0.85
RBM39-233ENST00000482563 VIL1P09327 827 aaKnown RBP9.72□□□□□ -0.85
RBM39-233ENST00000482563 FOXK2Q01167 660 aa9.72□□□□□ -0.85
RBM39-233ENST00000482563 SQSTM1Q13501 440 aa9.72□□□□□ -0.85
RBM39-233ENST00000482563 FAM50AQ14320 339 aaKnown RBP9.72□□□□□ -0.85
RBM39-233ENST00000482563 MYO19Q96H55 970 aa9.72□□□□□ -0.85
RBM39-233ENST00000482563 SPON2Q9BUD6 331 aa9.72□□□□□ -0.85
RBM39-233ENST00000482563 FAM126AQ9BYI3 521 aaPredicted RBP9.72□□□□□ -0.85
RBM39-233ENST00000482563 PRDM9Q9NQV7 894 aa9.72□□□□□ -0.85
RBM39-233ENST00000482563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms