RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 PTSQ03393 145 aa9.1□□□□□ -0.95
CCDC171-207ENST00000478913 POTEAQ6S8J7 498 aa9.1□□□□□ -0.95
CCDC171-207ENST00000478913 NGLY1Q96IV0 654 aa9.1□□□□□ -0.95
CCDC171-207ENST00000478913 TATP17735 454 aaPredicted RBP9.09□□□□□ -0.95
CCDC171-207ENST00000478913 TXLNAP40222 546 aa9.09□□□□□ -0.95
CCDC171-207ENST00000478913 IRF7Q92985 503 aa9.09□□□□□ -0.95
CCDC171-207ENST00000478913 COL26A1Q96A83 441 aa9.09□□□□□ -0.95
CCDC171-207ENST00000478913 ZDHHC3Q9NYG2 299 aa9.09□□□□□ -0.95
CCDC171-207ENST00000478913 MTMR7Q9Y216 660 aa9.09□□□□□ -0.95
CCDC171-207ENST00000478913 HCN4Q9Y3Q4 1203 aa9.09□□□□□ -0.95
CCDC171-207ENST00000478913 DYRK1BQ9Y463 629 aa9.09□□□□□ -0.95
CCDC171-207ENST00000478913 SENP3-EIF4A1A0A087X0R7 540 aa9.08□□□□□ -0.96
CCDC171-207ENST00000478913 SCNN1AP37088 669 aa9.08□□□□□ -0.96
CCDC171-207ENST00000478913 AEBP1Q8IUX7 1158 aa9.08□□□□□ -0.96
CCDC171-207ENST00000478913 GAS2L1Q99501 681 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-207ENST00000478913 PHACTR1Q9C0D0 580 aa9.08□□□□□ -0.96
CCDC171-207ENST00000478913 MSX1P28360 303 aa9.07□□□□□ -0.96
CCDC171-207ENST00000478913 ARID4AP29374 1257 aaPredicted RBP9.07□□□□□ -0.96
CCDC171-207ENST00000478913 KCNA1Q09470 495 aa9.07□□□□□ -0.96
CCDC171-207ENST00000478913 ALDH16A1Q8IZ83 802 aa9.07□□□□□ -0.96
CCDC171-207ENST00000478913 GPAMQ9HCL2 828 aa9.07□□□□□ -0.96
CCDC171-207ENST00000478913 SLC35F4A4IF30 521 aa9.06□□□□□ -0.96
CCDC171-207ENST00000478913 PATL2C9JE40 543 aaKnown RBP9.06□□□□□ -0.96
CCDC171-207ENST00000478913 ATP4AP20648 1035 aa9.06□□□□□ -0.96
CCDC171-207ENST00000478913 C1orf53Q5VUE5 145 aa9.06□□□□□ -0.96
CCDC171-207ENST00000478913 CAPN12Q6ZSI9 719 aa9.06□□□□□ -0.96
CCDC171-207ENST00000478913 KDM6BO15054 1643 aa9.05□□□□□ -0.96
CCDC171-207ENST00000478913 F11P03951 625 aa9.05□□□□□ -0.96
CCDC171-207ENST00000478913 NAA30Q147X3 362 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-207ENST00000478913 ARSJQ5FYB0 599 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-207ENST00000478913 BICDL1Q6ZP65 573 aa9.05□□□□□ -0.96
CCDC171-207ENST00000478913 PGBD3Q8N328 593 aa9.05□□□□□ -0.96
CCDC171-207ENST00000478913 CCDC155Q8N6L0 562 aa9.05□□□□□ -0.96
CCDC171-207ENST00000478913 RHPN1Q8TCX5 695 aa9.05□□□□□ -0.96
CCDC171-207ENST00000478913 QTRT2Q9H974 415 aaKnown RBP9.05□□□□□ -0.96
CCDC171-207ENST00000478913 SEPT3Q9UH03 358 aa9.05□□□□□ -0.96
CCDC171-207ENST00000478913 KCNMA1Q12791 1236 aa9.04□□□□□ -0.96
CCDC171-207ENST00000478913 RTN1Q16799 776 aa9.04□□□□□ -0.96
CCDC171-207ENST00000478913 C16orf46Q6P387 395 aa9.04□□□□□ -0.96
CCDC171-207ENST00000478913 RIPOR1Q6ZS17 1223 aa9.04□□□□□ -0.96
CCDC171-207ENST00000478913 NPAS3Q8IXF0 933 aa9.04□□□□□ -0.96
CCDC171-207ENST00000478913 CCER1Q8TC90 406 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-207ENST00000478913 ZNF608Q9ULD9 1512 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-207ENST00000478913 MYO19Q96H55 970 aa9.03□□□□□ -0.96
CCDC171-207ENST00000478913 RUBCNLQ9H714 662 aa9.03□□□□□ -0.96
CCDC171-207ENST00000478913 GPC6Q9Y625 555 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-207ENST00000478913 ATAD2BQ9ULI0 1458 aa9.02□□□□□ -0.96
CCDC171-207ENST00000478913 ABL1P00519 1130 aa9.02□□□□□ -0.97
CCDC171-207ENST00000478913 HIF1AQ16665 826 aa9.02□□□□□ -0.97
CCDC171-207ENST00000478913 TXNDC2Q86VQ3 553 aa9.02□□□□□ -0.97
CCDC171-207ENST00000478913 ITGA6P23229 1130 aa9.01□□□□□ -0.97
CCDC171-207ENST00000478913 SERPINB4P48594 390 aa9.01□□□□□ -0.97
CCDC171-207ENST00000478913 EFHC2Q5JST6 749 aa9.01□□□□□ -0.97
CCDC171-207ENST00000478913 COX20Q5RI15 118 aa9.01□□□□□ -0.97
CCDC171-207ENST00000478913 GTF3C2Q8WUA4 911 aaPredicted RBP9.01□□□□□ -0.97
CCDC171-207ENST00000478913 ZIC5Q96T25 663 aa9.01□□□□□ -0.97
CCDC171-207ENST00000478913 SAP130Q9H0E3 1048 aa9.01□□□□□ -0.97
CCDC171-207ENST00000478913 CRISPLD1Q9H336 500 aa9.01□□□□□ -0.97
CCDC171-207ENST00000478913 NEUROD4Q9HD90 331 aa9.01□□□□□ -0.97
CCDC171-207ENST00000478913 GNEQ9Y223 722 aaKnown RBP9.01□□□□□ -0.97
CCDC171-207ENST00000478913 GJA3Q9Y6H8 435 aa9.01□□□□□ -0.97
CCDC171-207ENST00000478913 IVNS1ABPQ9Y6Y0 642 aa9.01□□□□□ -0.97
CCDC171-207ENST00000478913 A0A1W2PNR3 127 aa9□□□□□ -0.97
CCDC171-207ENST00000478913 H7C1W4 665 aa9□□□□□ -0.97
CCDC171-207ENST00000478913 DGKZQ13574 1117 aa9□□□□□ -0.97
CCDC171-207ENST00000478913 HELQQ8TDG4 1101 aa9□□□□□ -0.97
CCDC171-207ENST00000478913 LRFN2Q9ULH4 789 aa9□□□□□ -0.97
CCDC171-207ENST00000478913 GAPVD1Q14C86 1478 aa9□□□□□ -0.97
CCDC171-207ENST00000478913 PPFIA3O75145 1194 aa8.99□□□□□ -0.97
CCDC171-207ENST00000478913 LBRQ14739 615 aaKnown RBP8.99□□□□□ -0.97
CCDC171-207ENST00000478913 C11orf91Q3C1V1 193 aa8.99□□□□□ -0.97
CCDC171-207ENST00000478913 C7orf43Q8WVR3 580 aa8.99□□□□□ -0.97
CCDC171-207ENST00000478913 NUCKS1Q9H1E3 243 aaKnown RBP8.99□□□□□ -0.97
CCDC171-207ENST00000478913 KLK14Q9P0G3 267 aa8.99□□□□□ -0.97
CCDC171-207ENST00000478913 DNMT3AQ9Y6K1 912 aaPredicted RBP8.99□□□□□ -0.97
CCDC171-207ENST00000478913 ZNF211Q13398 564 aaPredicted RBP8.98□□□□□ -0.97
CCDC171-207ENST00000478913 NLRP8Q86W28 1048 aa8.98□□□□□ -0.97
CCDC171-207ENST00000478913 TRIM22Q8IYM9 498 aa8.98□□□□□ -0.97
CCDC171-207ENST00000478913 HSH2DQ96JZ2 352 aa8.98□□□□□ -0.97
CCDC171-207ENST00000478913 SUSD3Q96L08 255 aa8.98□□□□□ -0.97
CCDC171-207ENST00000478913 ANKIB1Q9P2G1 1089 aa8.98□□□□□ -0.97
CCDC171-207ENST00000478913 EGFL7Q9UHF1 273 aa8.98□□□□□ -0.97
CCDC171-207ENST00000478913 ZBTB7CA1YPR0 619 aa8.97□□□□□ -0.97
CCDC171-207ENST00000478913 CDC14CA4D256 554 aa8.97□□□□□ -0.97
CCDC171-207ENST00000478913 LRRC69Q6ZNQ3 347 aa8.97□□□□□ -0.97
CCDC171-207ENST00000478913 GMCL1Q96IK5 515 aa8.97□□□□□ -0.97
CCDC171-207ENST00000478913 ANO2Q9NQ90 1003 aa8.97□□□□□ -0.97
CCDC171-207ENST00000478913 CUEDC1Q9NWM3 386 aaPredicted RBP8.97□□□□□ -0.97
CCDC171-207ENST00000478913 TNFRSF10BO14763 440 aa8.96□□□□□ -0.98
CCDC171-207ENST00000478913 BRD2P25440 801 aaKnown RBP8.96□□□□□ -0.98
CCDC171-207ENST00000478913 SF3B2Q13435 895 aaKnown RBP8.96□□□□□ -0.98
CCDC171-207ENST00000478913 MTMR3Q13615 1198 aa8.96□□□□□ -0.98
CCDC171-207ENST00000478913 DBN1Q16643 649 aa8.96□□□□□ -0.98
CCDC171-207ENST00000478913 ZNF280CQ8ND82 737 aa8.96□□□□□ -0.98
CCDC171-207ENST00000478913 KLRG1Q96E93 195 aa8.96□□□□□ -0.98
CCDC171-207ENST00000478913 STIM2Q9P246 746 aa8.96□□□□□ -0.98
CCDC171-207ENST00000478913 CADPSQ9ULU8 1353 aa8.96□□□□□ -0.98
CCDC171-207ENST00000478913 KIF13AQ9H1H9 1805 aa8.96□□□□□ -0.98
CCDC171-207ENST00000478913 H3BRB1 525 aa8.95□□□□□ -0.98
CCDC171-207ENST00000478913 TGFBR3LH3BV60 316 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms