RNA–Protein interactions for RNA: ENST00000478462.5

MSL3-214, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-214ENST00000478462 EIF2S2P20042 333 aaKnown RBP9.85□□□□□ -0.83
MSL3-214ENST00000478462 CANXP27824 592 aaKnown RBP9.85□□□□□ -0.83
MSL3-214ENST00000478462 NPM2Q86SE8 214 aaKnown RBP9.85□□□□□ -0.83
MSL3-214ENST00000478462 KIF12Q96FN5 646 aa9.85□□□□□ -0.83
MSL3-214ENST00000478462 CCDC87Q9NVE4 849 aa9.85□□□□□ -0.83
MSL3-214ENST00000478462 RTCBQ9Y3I0 505 aaKnown RBP9.85□□□□□ -0.83
MSL3-214ENST00000478462 PCDHB13Q9Y5F0 798 aa9.85□□□□□ -0.83
MSL3-214ENST00000478462 LAMB4A4D0S4 1761 aa9.85□□□□□ -0.83
MSL3-214ENST00000478462 CICQ96RK0 1608 aaPredicted RBP9.85□□□□□ -0.83
MSL3-214ENST00000478462 E9PSI1 815 aa9.84□□□□□ -0.83
MSL3-214ENST00000478462 MAP3K13O43283 966 aa9.84□□□□□ -0.83
MSL3-214ENST00000478462 PHF14O94880 888 aa9.84□□□□□ -0.83
MSL3-214ENST00000478462 A1BGP04217 495 aa9.84□□□□□ -0.83
MSL3-214ENST00000478462 KRT24Q2M2I5 525 aa9.84□□□□□ -0.83
MSL3-214ENST00000478462 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
MSL3-214ENST00000478462 DUSP27Q5VZP5 1158 aa9.84□□□□□ -0.83
MSL3-214ENST00000478462 INTS5Q6P9B9 1019 aaKnown RBP9.84□□□□□ -0.83
MSL3-214ENST00000478462 FLAD1Q8NFF5 587 aa9.84□□□□□ -0.83
MSL3-214ENST00000478462 ZNF330Q9Y3S2 320 aaPredicted RBP9.84□□□□□ -0.83
MSL3-214ENST00000478462 QSER1Q2KHR3 1735 aa9.84□□□□□ -0.83
MSL3-214ENST00000478462 FANCIQ9NVI1 1328 aa9.83□□□□□ -0.84
MSL3-214ENST00000478462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.83□□□□□ -0.84
MSL3-214ENST00000478462 POTEMA6NI47 508 aa9.83□□□□□ -0.84
MSL3-214ENST00000478462 RPS6KA4O75676 772 aa9.83□□□□□ -0.84
MSL3-214ENST00000478462 SLFN5Q08AF3 891 aa9.83□□□□□ -0.84
MSL3-214ENST00000478462 ZNF467Q7Z7K2 595 aaPredicted RBP9.83□□□□□ -0.84
MSL3-214ENST00000478462 C8orf58Q8NAV2 365 aa9.83□□□□□ -0.84
MSL3-214ENST00000478462 NECTIN2Q92692 538 aa9.83□□□□□ -0.84
MSL3-214ENST00000478462 CDCA7LQ96GN5 454 aa9.83□□□□□ -0.84
MSL3-214ENST00000478462 ARXQ96QS3 562 aa9.83□□□□□ -0.84
MSL3-214ENST00000478462 CHMP4AQ9BY43 222 aa9.83□□□□□ -0.84
MSL3-214ENST00000478462 ZBTB1Q9Y2K1 713 aa9.83□□□□□ -0.84
MSL3-214ENST00000478462 HOXB7P09629 217 aa9.82□□□□□ -0.84
MSL3-214ENST00000478462 SSFA2P28290 1259 aa9.82□□□□□ -0.84
MSL3-214ENST00000478462 RFC4P35249 363 aa9.82□□□□□ -0.84
MSL3-214ENST00000478462 EXOSC9Q06265 439 aaKnown RBP9.82□□□□□ -0.84
MSL3-214ENST00000478462 HDGFL1Q5TGJ6 251 aa9.82□□□□□ -0.84
MSL3-214ENST00000478462 SMIM5Q71RC9 77 aa9.82□□□□□ -0.84
MSL3-214ENST00000478462 YTHDC1Q96MU7 727 aaKnown RBP9.82□□□□□ -0.84
MSL3-214ENST00000478462 ZBED9Q6R2W3 1325 aa9.82□□□□□ -0.84
MSL3-214ENST00000478462 PNPLA7Q6ZV29 1317 aa9.82□□□□□ -0.84
MSL3-214ENST00000478462 A0A087WZG4 1122 aa9.81□□□□□ -0.84
MSL3-214ENST00000478462 IL6STP40189 918 aaPredicted RBP9.81□□□□□ -0.84
MSL3-214ENST00000478462 PIP4K2AP48426 406 aaPredicted RBP9.81□□□□□ -0.84
MSL3-214ENST00000478462 TWISTNBQ3B726 338 aaPredicted RBP9.81□□□□□ -0.84
MSL3-214ENST00000478462 COL23A1Q86Y22 540 aaPredicted RBP9.81□□□□□ -0.84
MSL3-214ENST00000478462 TSPYL6Q8N831 410 aa9.81□□□□□ -0.84
MSL3-214ENST00000478462 ARHGEF1Q92888 912 aaKnown RBP9.81□□□□□ -0.84
MSL3-214ENST00000478462 SGIP1Q9BQI5 828 aa9.81□□□□□ -0.84
MSL3-214ENST00000478462 PCDHB8Q9UN66 801 aa9.81□□□□□ -0.84
MSL3-214ENST00000478462 SOS1Q07889 1333 aaPredicted RBP9.81□□□□□ -0.84
MSL3-214ENST00000478462 NBPF26B4DH59 902 aa9.8□□□□□ -0.84
MSL3-214ENST00000478462 POTEB2H3BUK9 544 aa9.8□□□□□ -0.84
MSL3-214ENST00000478462 ZPR1O75312 459 aa9.8□□□□□ -0.84
MSL3-214ENST00000478462 MYL6BP14649 208 aa9.8□□□□□ -0.84
MSL3-214ENST00000478462 EIF5P55010 431 aaKnown RBP9.8□□□□□ -0.84
MSL3-214ENST00000478462 CCDC30Q5VVM6 783 aa9.8□□□□□ -0.84
MSL3-214ENST00000478462 NBPF10Q6P3W6 841 aaKnown RBP9.8□□□□□ -0.84
MSL3-214ENST00000478462 AMIGO3Q86WK7 504 aa9.8□□□□□ -0.84
MSL3-214ENST00000478462 NBPF15Q8N660 670 aa9.8□□□□□ -0.84
MSL3-214ENST00000478462 PDGFDQ9GZP0 370 aaPredicted RBP9.8□□□□□ -0.84
MSL3-214ENST00000478462 ERBB4Q15303 1308 aa9.8□□□□□ -0.84
MSL3-214ENST00000478462 ZBTB7AO95365 584 aa9.79□□□□□ -0.84
MSL3-214ENST00000478462 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
MSL3-214ENST00000478462 SLC16A10Q8TF71 515 aa9.79□□□□□ -0.84
MSL3-214ENST00000478462 STK31Q9BXU1 1019 aa9.79□□□□□ -0.84
MSL3-214ENST00000478462 DDX21Q9NR30 783 aaKnown RBP eCLIP9.79□□□□□ -0.84
MSL3-214ENST00000478462 CHPF2Q9P2E5 772 aa9.79□□□□□ -0.84
MSL3-214ENST00000478462 DBF4Q9UBU7 674 aaPredicted RBP9.79□□□□□ -0.84
MSL3-214ENST00000478462 TBC1D2BQ9UPU7 963 aa9.79□□□□□ -0.84
MSL3-214ENST00000478462 C4AP0C0L4 1744 aa9.79□□□□□ -0.84
MSL3-214ENST00000478462 CASZ1Q86V15 1759 aa9.78□□□□□ -0.84
MSL3-214ENST00000478462 COL15A1P39059 1388 aa9.78□□□□□ -0.84
MSL3-214ENST00000478462 STK25O00506 426 aa9.78□□□□□ -0.84
MSL3-214ENST00000478462 VAMP4O75379 141 aa9.78□□□□□ -0.84
MSL3-214ENST00000478462 ANXA1P04083 346 aa9.78□□□□□ -0.84
MSL3-214ENST00000478462 IFNL1Q8IU54 200 aa9.78□□□□□ -0.84
MSL3-214ENST00000478462 TRMT2AQ8IZ69 625 aaKnown RBP9.78□□□□□ -0.84
MSL3-214ENST00000478462 HYPKQ9NX55 129 aa9.78□□□□□ -0.84
MSL3-214ENST00000478462 NUP98P52948 1817 aa9.77□□□□□ -0.84
MSL3-214ENST00000478462 TCERG1O14776 1098 aaKnown RBP9.77□□□□□ -0.85
MSL3-214ENST00000478462 AIMP1Q12904 312 aaKnown RBP9.77□□□□□ -0.85
MSL3-214ENST00000478462 PDIA6Q15084 440 aa9.77□□□□□ -0.85
MSL3-214ENST00000478462 PROSER3Q2NL68 480 aa9.77□□□□□ -0.85
MSL3-214ENST00000478462 KIF6Q6ZMV9 814 aa9.77□□□□□ -0.85
MSL3-214ENST00000478462 DZIP3Q86Y13 1208 aaKnown RBP9.77□□□□□ -0.85
MSL3-214ENST00000478462 MTFR1LQ9H019 292 aa9.77□□□□□ -0.85
MSL3-214ENST00000478462 SRP68Q9UHB9 627 aaKnown RBP9.77□□□□□ -0.85
MSL3-214ENST00000478462 NARFQ9UHQ1 456 aa9.77□□□□□ -0.85
MSL3-214ENST00000478462 USPL1Q5W0Q7 1092 aa9.76□□□□□ -0.85
MSL3-214ENST00000478462 MSL1Q68DK7 614 aa9.76□□□□□ -0.85
MSL3-214ENST00000478462 COPS6Q7L5N1 327 aa9.76□□□□□ -0.85
MSL3-214ENST00000478462 NLGN1Q8N2Q7 840 aa9.76□□□□□ -0.85
MSL3-214ENST00000478462 XAGE3Q8WTP9 111 aa9.76□□□□□ -0.85
MSL3-214ENST00000478462 SPON1Q9HCB6 807 aa9.76□□□□□ -0.85
MSL3-214ENST00000478462 PCDH10Q9P2E7 1040 aa9.76□□□□□ -0.85
MSL3-214ENST00000478462 USP42Q9H9J4 1324 aaKnown RBP9.76□□□□□ -0.85
MSL3-214ENST00000478462 CT47B1P0C2W7 299 aaPredicted RBP9.75□□□□□ -0.85
MSL3-214ENST00000478462 GYS1P13807 737 aa9.75□□□□□ -0.85
MSL3-214ENST00000478462 POLD1P28340 1107 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms