RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 NBPF1Q3BBV0 1214 aa7.54□□□□□ -1.2
ECHDC1-215ENST00000475319 MAP7D1Q3KQU3 841 aa7.54□□□□□ -1.2
ECHDC1-215ENST00000475319 NBPF11Q86T75 865 aa7.54□□□□□ -1.2
ECHDC1-215ENST00000475319 DCAF5Q96JK2 942 aa7.54□□□□□ -1.2
ECHDC1-215ENST00000475319 COL25A1Q9BXS0 654 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-215ENST00000475319 DNAAF2Q9NVR5 837 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-215ENST00000475319 CCDC88BA6NC98 1476 aa7.54□□□□□ -1.2
ECHDC1-215ENST00000475319 TTC36A6NLP5 189 aa7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 MMP16P51512 607 aa7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 MCCD1P59942 119 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 HSP90AB3PQ58FF7 597 aa7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 CYB5RLQ6IPT4 315 aa7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 PDXDC2PQ6P474 469 aa7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 TRIM50Q86XT4 487 aa7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 GPR161Q8N6U8 529 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 DCAF11Q8TEB1 546 aa7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 TSPYL1Q9H0U9 437 aa7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 KIAA1024Q9UPX6 916 aa7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 TOPBP1Q92547 1522 aa7.53□□□□□ -1.2
ECHDC1-215ENST00000475319 H3BRB1 525 aa7.52□□□□□ -1.2
ECHDC1-215ENST00000475319 DKK1O94907 266 aa7.52□□□□□ -1.2
ECHDC1-215ENST00000475319 SLURP2P0DP57 97 aa7.52□□□□□ -1.2
ECHDC1-215ENST00000475319 ATP1A2P50993 1020 aa7.52□□□□□ -1.2
ECHDC1-215ENST00000475319 ZNF211Q13398 564 aaPredicted RBP7.52□□□□□ -1.2
ECHDC1-215ENST00000475319 EGFL6Q8IUX8 553 aa7.52□□□□□ -1.2
ECHDC1-215ENST00000475319 EHBP1Q8NDI1 1231 aa7.52□□□□□ -1.2
ECHDC1-215ENST00000475319 PRIMPOLQ96LW4 560 aa7.52□□□□□ -1.2
ECHDC1-215ENST00000475319 TUT1Q9H6E5 874 aaKnown RBP7.52□□□□□ -1.2
ECHDC1-215ENST00000475319 ANO2Q9NQ90 1003 aa7.52□□□□□ -1.2
ECHDC1-215ENST00000475319 NOD1Q9Y239 953 aa7.52□□□□□ -1.2
ECHDC1-215ENST00000475319 DNMBPQ6XZF7 1577 aa7.52□□□□□ -1.21
ECHDC1-215ENST00000475319 CCER2I3L3R5 266 aa7.52□□□□□ -1.21
ECHDC1-215ENST00000475319 NFKBIBQ15653 356 aa7.52□□□□□ -1.21
ECHDC1-215ENST00000475319 OCLNQ16625 522 aa7.52□□□□□ -1.21
ECHDC1-215ENST00000475319 LARGE2Q8N3Y3 721 aa7.52□□□□□ -1.21
ECHDC1-215ENST00000475319 ADAM32Q8TC27 787 aa7.52□□□□□ -1.21
ECHDC1-215ENST00000475319 WHAMMQ8TF30 809 aa7.52□□□□□ -1.21
ECHDC1-215ENST00000475319 RIMBP3CA6NJZ7 1639 aa7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 RIMBP3BA6NNM3 1639 aa7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 RIMBP3Q9UFD9 1639 aa7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 ZBTB7BO15156 539 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 CCNYL3P0C7X3 344 aa7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 TAGLNQ01995 201 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 TAS1R3Q7RTX0 852 aa7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 SIX5Q8N196 739 aa7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 CCDC24Q8N4L8 307 aa7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 ARMC2Q8NEN0 867 aa7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 CHMP7Q8WUX9 453 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 GPKOWQ92917 476 aaPredicted RBP eCLIP7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 CXXC1Q9P0U4 656 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 EGFL7Q9UHF1 273 aa7.51□□□□□ -1.21
ECHDC1-215ENST00000475319 ARHGEF11O15085 1522 aa7.5□□□□□ -1.21
ECHDC1-215ENST00000475319 OXLD1Q5BKU9 147 aa7.5□□□□□ -1.21
ECHDC1-215ENST00000475319 EVA1BQ9NVM1 165 aa7.5□□□□□ -1.21
ECHDC1-215ENST00000475319 DOLKQ9UPQ8 538 aa7.5□□□□□ -1.21
ECHDC1-215ENST00000475319 ZNF608Q9ULD9 1512 aaPredicted RBP7.49□□□□□ -1.21
ECHDC1-215ENST00000475319 ICMTO60725 284 aa7.49□□□□□ -1.21
ECHDC1-215ENST00000475319 LGR5O75473 907 aa7.49□□□□□ -1.21
ECHDC1-215ENST00000475319 ZSCAN20P17040 1043 aaPredicted RBP7.49□□□□□ -1.21
ECHDC1-215ENST00000475319 SEC13P55735 322 aa7.49□□□□□ -1.21
ECHDC1-215ENST00000475319 MAP3K10Q02779 954 aa7.49□□□□□ -1.21
ECHDC1-215ENST00000475319 NBPF14Q5TI25 921 aa7.49□□□□□ -1.21
ECHDC1-215ENST00000475319 FBXO33Q7Z6M2 555 aa7.49□□□□□ -1.21
ECHDC1-215ENST00000475319 GLYCTKQ8IVS8 523 aa7.49□□□□□ -1.21
ECHDC1-215ENST00000475319 CCDC85AQ96PX6 553 aaPredicted RBP7.49□□□□□ -1.21
ECHDC1-215ENST00000475319 ARHGAP9Q9BRR9 750 aa7.49□□□□□ -1.21
ECHDC1-215ENST00000475319 SFI1A8K8P3 1242 aa7.48□□□□□ -1.21
ECHDC1-215ENST00000475319 MAPK1P28482 360 aa7.48□□□□□ -1.21
ECHDC1-215ENST00000475319 BAG6P46379 1132 aa7.48□□□□□ -1.21
ECHDC1-215ENST00000475319 GTF2IP78347 998 aa7.48□□□□□ -1.21
ECHDC1-215ENST00000475319 NBPF9Q3BBW0 867 aa7.48□□□□□ -1.21
ECHDC1-215ENST00000475319 CCDC102BQ68D86 513 aa7.48□□□□□ -1.21
ECHDC1-215ENST00000475319 NUDT12Q9BQG2 462 aa7.48□□□□□ -1.21
ECHDC1-215ENST00000475319 ENAMQ9NRM1 1142 aa7.48□□□□□ -1.21
ECHDC1-215ENST00000475319 SOGA1O94964 1423 aa7.48□□□□□ -1.21
ECHDC1-215ENST00000475319 ITGB2P05107 769 aa7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 VAMP1P23763 118 aa7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 CASC1Q6TDU7 716 aa7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 ZBTB33Q86T24 672 aa7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 EIF4G3O43432 1585 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 DXOO77932 396 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 TPCN2Q8NHX9 752 aa7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 GTF3C2Q8WUA4 911 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 CCDC94Q9BW85 323 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 RAI14Q9P0K7 980 aa7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 SEPT3Q9UH03 358 aa7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 WDR97A6NE52 1622 aa7.47□□□□□ -1.21
ECHDC1-215ENST00000475319 AQRO60306 1485 aaKnown RBP eCLIP7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 ESPNB1AK53 854 aa7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 C21orf2O43822 256 aa7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 ECM1Q16610 540 aa7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 DZIP3Q86Y13 1208 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 ZNF526Q8TF50 670 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 ASB16Q96NS5 453 aa7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 MKNK1Q9BUB5 465 aa7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 EFCC1Q9HA90 598 aa7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 CWC22Q9HCG8 908 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 RBM28Q9NW13 759 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-215ENST00000475319 GIGYF1O75420 1035 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms