RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
ITGA6-210ENST00000475302 PCDHB15Q9Y5E8 787 aa12.34□□□□□ -0.43
ITGA6-210ENST00000475302 PARP4Q9UKK3 1724 aaKnown RBP12.34□□□□□ -0.43
ITGA6-210ENST00000475302 DPYSL4O14531 572 aa12.33□□□□□ -0.44
ITGA6-210ENST00000475302 IGHDP01880 384 aa12.33□□□□□ -0.44
ITGA6-210ENST00000475302 C1orf141Q5JVX7 400 aa12.33□□□□□ -0.44
ITGA6-210ENST00000475302 POTEEQ6S8J3 1075 aa12.33□□□□□ -0.44
ITGA6-210ENST00000475302 ZBTB40Q9NUA8 1239 aa12.33□□□□□ -0.44
ITGA6-210ENST00000475302 DISP2A7MBM2 1401 aa12.33□□□□□ -0.44
ITGA6-210ENST00000475302 ZBTB7BO15156 539 aaPredicted RBP12.32□□□□□ -0.44
ITGA6-210ENST00000475302 HOXB7P09629 217 aa12.32□□□□□ -0.44
ITGA6-210ENST00000475302 CENPQQ7L2Z9 268 aaPredicted RBP12.32□□□□□ -0.44
ITGA6-210ENST00000475302 IFNL2Q8IZJ0 200 aa12.32□□□□□ -0.44
ITGA6-210ENST00000475302 WDR70Q9NW82 654 aa12.32□□□□□ -0.44
ITGA6-210ENST00000475302 INTS3Q68E01 1043 aaKnown RBP12.31□□□□□ -0.44
ITGA6-210ENST00000475302 TOM1L2Q6ZVM7 507 aa12.31□□□□□ -0.44
ITGA6-210ENST00000475302 G2E3Q7L622 706 aa12.31□□□□□ -0.44
ITGA6-210ENST00000475302 DCAF5Q96JK2 942 aa12.31□□□□□ -0.44
ITGA6-210ENST00000475302 API5Q9BZZ5 524 aaKnown RBP12.31□□□□□ -0.44
ITGA6-210ENST00000475302 SLC52A2Q9HAB3 445 aa12.31□□□□□ -0.44
ITGA6-210ENST00000475302 ANO8Q9HCE9 1232 aaPredicted RBP12.31□□□□□ -0.44
ITGA6-210ENST00000475302 DDX19BQ9UMR2 479 aa12.31□□□□□ -0.44
ITGA6-210ENST00000475302 PTPRCP08575 1304 aa12.31□□□□□ -0.44
ITGA6-210ENST00000475302 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
ITGA6-210ENST00000475302 IL2RBP14784 551 aa12.3□□□□□ -0.44
ITGA6-210ENST00000475302 BTG4Q9NY30 223 aa12.3□□□□□ -0.44
ITGA6-210ENST00000475302 NRAPQ86VF7 1730 aa12.3□□□□□ -0.44
ITGA6-210ENST00000475302 GIGYF1O75420 1035 aaPredicted RBP12.29□□□□□ -0.44
ITGA6-210ENST00000475302 TEFQ10587 303 aa12.29□□□□□ -0.44
ITGA6-210ENST00000475302 E2F4Q16254 413 aa12.29□□□□□ -0.44
ITGA6-210ENST00000475302 FTSJ3Q8IY81 847 aaKnown RBP12.29□□□□□ -0.44
ITGA6-210ENST00000475302 ZCRB1Q8TBF4 217 aaKnown RBP12.29□□□□□ -0.44
ITGA6-210ENST00000475302 GLI3P10071 1580 aa12.29□□□□□ -0.44
ITGA6-210ENST00000475302 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
ITGA6-210ENST00000475302 SLIT2O94813 1529 aa12.28□□□□□ -0.44
ITGA6-210ENST00000475302 PSDA5PKW4 1024 aaPredicted RBP12.28□□□□□ -0.44
ITGA6-210ENST00000475302 HSP90AB1P08238 724 aaKnown RBP12.28□□□□□ -0.44
ITGA6-210ENST00000475302 CCDC30Q5VVM6 783 aa12.28□□□□□ -0.44
ITGA6-210ENST00000475302 ZNF454Q8N9F8 522 aa12.28□□□□□ -0.44
ITGA6-210ENST00000475302 CACNA1FO60840 1977 aa12.27□□□□□ -0.44
ITGA6-210ENST00000475302 EVA1CP58658 441 aa12.27□□□□□ -0.45
ITGA6-210ENST00000475302 HDAC1Q13547 482 aaPredicted RBP12.27□□□□□ -0.45
ITGA6-210ENST00000475302 SPNS2Q8IVW8 549 aa12.27□□□□□ -0.45
ITGA6-210ENST00000475302 ITPRIPQ8IWB1 547 aa12.27□□□□□ -0.45
ITGA6-210ENST00000475302 NFATC2IPQ8NCF5 419 aa12.27□□□□□ -0.45
ITGA6-210ENST00000475302 STRN4Q9NRL3 753 aa12.27□□□□□ -0.45
ITGA6-210ENST00000475302 PCDH11XQ9BZA7 1347 aa12.27□□□□□ -0.45
ITGA6-210ENST00000475302 PCDH11YQ9BZA8 1340 aa12.27□□□□□ -0.45
ITGA6-210ENST00000475302 UBAP1LF5GYI3 381 aa12.26□□□□□ -0.45
ITGA6-210ENST00000475302 PPP4R3BQ5MIZ7 849 aa12.26□□□□□ -0.45
ITGA6-210ENST00000475302 ZNF790Q6PG37 636 aa12.26□□□□□ -0.45
ITGA6-210ENST00000475302 CERKQ8TCT0 537 aa12.26□□□□□ -0.45
ITGA6-210ENST00000475302 TOGARAM1Q9Y4F4 1720 aa12.25□□□□□ -0.45
ITGA6-210ENST00000475302 ERVV-2B6SEH9 535 aa12.25□□□□□ -0.45
ITGA6-210ENST00000475302 FOSBP53539 338 aa12.25□□□□□ -0.45
ITGA6-210ENST00000475302 PIP4K2BP78356 416 aa12.25□□□□□ -0.45
ITGA6-210ENST00000475302 PAPPAQ13219 1627 aa12.25□□□□□ -0.45
ITGA6-210ENST00000475302 NWD2Q9ULI1 1742 aa12.25□□□□□ -0.45
ITGA6-210ENST00000475302 N4BP2Q86UW6 1770 aaPredicted RBP12.25□□□□□ -0.45
ITGA6-210ENST00000475302 WNK3Q9BYP7 1800 aa12.25□□□□□ -0.45
ITGA6-210ENST00000475302 PRAMEF22A3QJZ6 481 aa12.24□□□□□ -0.45
ITGA6-210ENST00000475302 FLIIQ13045 1269 aa12.24□□□□□ -0.45
ITGA6-210ENST00000475302 PDIA6Q15084 440 aa12.24□□□□□ -0.45
ITGA6-210ENST00000475302 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
ITGA6-210ENST00000475302 SKAP1Q86WV1 359 aa12.24□□□□□ -0.45
ITGA6-210ENST00000475302 SIRT2Q8IXJ6 389 aa12.24□□□□□ -0.45
ITGA6-210ENST00000475302 SMC5Q8IY18 1101 aa12.24□□□□□ -0.45
ITGA6-210ENST00000475302 UBR2Q8IWV8 1755 aa12.23□□□□□ -0.45
ITGA6-210ENST00000475302 C5P01031 1676 aa12.23□□□□□ -0.45
ITGA6-210ENST00000475302 TNS2Q63HR2 1409 aa12.23□□□□□ -0.45
ITGA6-210ENST00000475302 SPATA31A1Q5TZJ5 1347 aa12.23□□□□□ -0.45
ITGA6-210ENST00000475302 SLC39A6Q13433 755 aa12.23□□□□□ -0.45
ITGA6-210ENST00000475302 LRP10Q7Z4F1 713 aa12.23□□□□□ -0.45
ITGA6-210ENST00000475302 ZNF496Q96IT1 587 aaPredicted RBP12.23□□□□□ -0.45
ITGA6-210ENST00000475302 STK31Q9BXU1 1019 aa12.23□□□□□ -0.45
ITGA6-210ENST00000475302 CHMP4BQ9H444 224 aaKnown RBP12.23□□□□□ -0.45
ITGA6-210ENST00000475302 RWDD1Q9H446 243 aaPredicted RBP12.23□□□□□ -0.45
ITGA6-210ENST00000475302 LRP6O75581 1613 aa12.22□□□□□ -0.45
ITGA6-210ENST00000475302 KCPQ6ZWJ8 1503 aa12.22□□□□□ -0.45
ITGA6-210ENST00000475302 PXDNLA1KZ92 1463 aa12.22□□□□□ -0.45
ITGA6-210ENST00000475302 JCADQ9P266 1359 aa12.22□□□□□ -0.45
ITGA6-210ENST00000475302 F6X3S4 739 aa12.22□□□□□ -0.45
ITGA6-210ENST00000475302 PBX2P40425 430 aa12.22□□□□□ -0.45
ITGA6-210ENST00000475302 PSEN2P49810 448 aa12.22□□□□□ -0.45
ITGA6-210ENST00000475302 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
ITGA6-210ENST00000475302 PHAXQ9H814 394 aaKnown RBP12.22□□□□□ -0.45
ITGA6-210ENST00000475302 CHPF2Q9P2E5 772 aa12.22□□□□□ -0.45
ITGA6-210ENST00000475302 BCL9LQ86UU0 1499 aa12.21□□□□□ -0.45
ITGA6-210ENST00000475302 ATP10DQ9P241 1426 aa12.21□□□□□ -0.45
ITGA6-210ENST00000475302 SPATA31A5Q5VU36 1347 aa12.21□□□□□ -0.45
ITGA6-210ENST00000475302 SPATA31A7Q8IWB4 1347 aa12.21□□□□□ -0.45
ITGA6-210ENST00000475302 ADAMTS2O95450 1211 aa12.21□□□□□ -0.45
ITGA6-210ENST00000475302 CCT4P50991 539 aaKnown RBP12.21□□□□□ -0.45
ITGA6-210ENST00000475302 CABP4P57796 275 aa12.21□□□□□ -0.45
ITGA6-210ENST00000475302 LSM11P83369 360 aaKnown RBP eCLIP12.21□□□□□ -0.45
ITGA6-210ENST00000475302 PROSER3Q2NL68 480 aa12.21□□□□□ -0.45
ITGA6-210ENST00000475302 ANKRD13DQ6ZTN6 518 aa12.21□□□□□ -0.45
ITGA6-210ENST00000475302 NECTIN2Q92692 538 aa12.21□□□□□ -0.45
ITGA6-210ENST00000475302 THRAP3Q9Y2W1 955 aaKnown RBP12.21□□□□□ -0.45
ITGA6-210ENST00000475302 ARHGAP33O14559 1287 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms