RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 C3orf67Q6ZVT6 689 aa8.39□□□□□ -1.07
NUP35-208ENST00000472844 ANKMY2Q8IV38 441 aa8.39□□□□□ -1.07
NUP35-208ENST00000472844 FEZ2Q9UHY8 353 aaPredicted RBP8.39□□□□□ -1.07
NUP35-208ENST00000472844 KAT6BQ8WYB5 2073 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 USP17L5A8MUK1 530 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 SNPHO15079 494 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
NUP35-208ENST00000472844 BPNT1O95861 308 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 SKIP12755 728 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 CHMP4BP1P59074 171 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 ARHGAP4P98171 946 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 SERINC3Q13530 473 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 ARSHQ5FYA8 562 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 PRPF38BQ5VTL8 546 aaKnown RBP8.38□□□□□ -1.07
NUP35-208ENST00000472844 MSL3Q8N5Y2 521 aaKnown RBP8.38□□□□□ -1.07
NUP35-208ENST00000472844 CABLES1Q8TDN4 633 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
NUP35-208ENST00000472844 DUSP9Q99956 384 aaKnown RBP8.38□□□□□ -1.07
NUP35-208ENST00000472844 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 CHMP4BQ9H444 224 aaKnown RBP8.38□□□□□ -1.07
NUP35-208ENST00000472844 ARNT2Q9HBZ2 717 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 NPDC1Q9NQX5 325 aaPredicted RBP8.38□□□□□ -1.07
NUP35-208ENST00000472844 PCDHB15Q9Y5E8 787 aa8.38□□□□□ -1.07
NUP35-208ENST00000472844 CCDC163A0A0D9SF12 145 aa8.37□□□□□ -1.07
NUP35-208ENST00000472844 PIK3CDO00329 1044 aa8.37□□□□□ -1.07
NUP35-208ENST00000472844 TBX3O15119 743 aa8.37□□□□□ -1.07
NUP35-208ENST00000472844 LDHBP07195 334 aaKnown RBP8.37□□□□□ -1.07
NUP35-208ENST00000472844 PDE6BP35913 854 aa8.37□□□□□ -1.07
NUP35-208ENST00000472844 DAB2P98082 770 aa8.37□□□□□ -1.07
NUP35-208ENST00000472844 ECM1Q16610 540 aa8.37□□□□□ -1.07
NUP35-208ENST00000472844 AXDND1Q5T1B0 1012 aaPredicted RBP8.37□□□□□ -1.07
NUP35-208ENST00000472844 TAS1R3Q7RTX0 852 aa8.37□□□□□ -1.07
NUP35-208ENST00000472844 SNRNP27Q8WVK2 155 aaKnown RBP8.37□□□□□ -1.07
NUP35-208ENST00000472844 SRPK1Q96SB4 655 aaKnown RBP8.37□□□□□ -1.07
NUP35-208ENST00000472844 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.37□□□□□ -1.07
NUP35-208ENST00000472844 C12orf49Q9H741 205 aa8.37□□□□□ -1.07
NUP35-208ENST00000472844 CDHR5Q9HBB8 845 aa8.37□□□□□ -1.07
NUP35-208ENST00000472844 CEP126Q9P2H0 1117 aa8.37□□□□□ -1.07
NUP35-208ENST00000472844 DDX41Q9UJV9 622 aaKnown RBP8.37□□□□□ -1.07
NUP35-208ENST00000472844 CTDP1Q9Y5B0 961 aaPredicted RBP8.37□□□□□ -1.07
NUP35-208ENST00000472844 FMNL1O95466 1100 aaPredicted RBP8.36□□□□□ -1.07
NUP35-208ENST00000472844 TRAPPC10P48553 1259 aa8.36□□□□□ -1.07
NUP35-208ENST00000472844 EXOSC10Q01780 885 aaKnown RBP8.36□□□□□ -1.07
NUP35-208ENST00000472844 FKBP4Q02790 459 aaKnown RBP eCLIP8.36□□□□□ -1.07
NUP35-208ENST00000472844 SF3B2Q13435 895 aaKnown RBP8.36□□□□□ -1.07
NUP35-208ENST00000472844 HLTFQ14527 1009 aaKnown RBP eCLIP8.36□□□□□ -1.07
NUP35-208ENST00000472844 CHPFQ8IZ52 775 aa8.36□□□□□ -1.07
NUP35-208ENST00000472844 ZNF700Q9H0M5 742 aa8.36□□□□□ -1.07
NUP35-208ENST00000472844 NOL7Q9UMY1 257 aaKnown RBP8.36□□□□□ -1.07
NUP35-208ENST00000472844 ATP5J2-PTCD1G3V325 749 aa8.35□□□□□ -1.07
NUP35-208ENST00000472844 FAM163BP0C2L3 166 aa8.35□□□□□ -1.07
NUP35-208ENST00000472844 CDC27P30260 824 aa8.35□□□□□ -1.07
NUP35-208ENST00000472844 CTDSPL2Q05D32 466 aa8.35□□□□□ -1.07
NUP35-208ENST00000472844 FMR1Q06787 632 aaKnown RBP eCLIP8.35□□□□□ -1.07
NUP35-208ENST00000472844 CBLBQ13191 982 aa8.35□□□□□ -1.07
NUP35-208ENST00000472844 CCDC184Q52MB2 194 aa8.35□□□□□ -1.07
NUP35-208ENST00000472844 DPY19L2Q6NUT2 758 aa8.35□□□□□ -1.07
NUP35-208ENST00000472844 RAVER1Q8IY67 606 aaKnown RBP8.35□□□□□ -1.07
NUP35-208ENST00000472844 TEX19Q8NA77 164 aa8.35□□□□□ -1.07
NUP35-208ENST00000472844 PXYLP1Q8TE99 480 aa8.35□□□□□ -1.07
NUP35-208ENST00000472844 FANCLQ9NW38 375 aa8.35□□□□□ -1.07
NUP35-208ENST00000472844 CBFA2T2O43439 604 aa8.34□□□□□ -1.07
NUP35-208ENST00000472844 TSPAN6O43657 245 aa8.34□□□□□ -1.07
NUP35-208ENST00000472844 TMEM95Q3KNT9 176 aa8.34□□□□□ -1.07
NUP35-208ENST00000472844 TBC1D10BQ4KMP7 808 aaPredicted RBP8.34□□□□□ -1.07
NUP35-208ENST00000472844 C10orf62Q5T681 223 aaPredicted RBP8.34□□□□□ -1.07
NUP35-208ENST00000472844 CC2D1AQ6P1N0 951 aaPredicted RBP8.34□□□□□ -1.07
NUP35-208ENST00000472844 DDX46Q7L014 1031 aaKnown RBP8.34□□□□□ -1.07
NUP35-208ENST00000472844 TMC7Q7Z402 723 aa8.34□□□□□ -1.07
NUP35-208ENST00000472844 PLPP6Q8IY26 295 aa8.34□□□□□ -1.07
NUP35-208ENST00000472844 DEPDC4Q8N2C3 294 aa8.34□□□□□ -1.07
NUP35-208ENST00000472844 CCDC89Q8N998 374 aa8.34□□□□□ -1.07
NUP35-208ENST00000472844 GTF3C2Q8WUA4 911 aaPredicted RBP8.34□□□□□ -1.07
NUP35-208ENST00000472844 APPBP2Q92624 585 aa8.34□□□□□ -1.07
NUP35-208ENST00000472844 RBCK1Q9BYM8 510 aa8.34□□□□□ -1.07
NUP35-208ENST00000472844 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
NUP35-208ENST00000472844 CXXC1Q9P0U4 656 aaPredicted RBP8.34□□□□□ -1.07
NUP35-208ENST00000472844 SIRPGQ9P1W8 387 aa8.34□□□□□ -1.07
NUP35-208ENST00000472844 WIZO95785 1651 aa8.34□□□□□ -1.08
NUP35-208ENST00000472844 SCP2P22307 547 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 CASP2P42575 452 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 DPYDQ12882 1025 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 NFE2Q16621 373 aaPredicted RBP8.33□□□□□ -1.08
NUP35-208ENST00000472844 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 ZNF394Q53GI3 561 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 USP48Q86UV5 1035 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 TTC30BQ8N4P2 665 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 AS3MTQ9HBK9 375 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 CYLDQ9NQC7 956 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 CHST12Q9NRB3 414 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 INTUQ9ULD6 942 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 EMILIN1Q9Y6C2 1016 aa8.33□□□□□ -1.08
NUP35-208ENST00000472844 TREHO43280 583 aa8.32□□□□□ -1.08
NUP35-208ENST00000472844 FAM200BP0CF97 657 aa8.32□□□□□ -1.08
NUP35-208ENST00000472844 HCLS1P14317 486 aaPredicted RBP8.32□□□□□ -1.08
NUP35-208ENST00000472844 ATF4P18848 351 aaPredicted RBP8.32□□□□□ -1.08
NUP35-208ENST00000472844 CTHP32929 405 aa8.32□□□□□ -1.08
NUP35-208ENST00000472844 MAPK8P45983 427 aa8.32□□□□□ -1.08
NUP35-208ENST00000472844 MASP1P48740 699 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms