RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 KRT24Q2M2I5 525 aa21.65■■□□□ 1.06
TSPO-205ENST00000472378 CCDC30Q5VVM6 783 aa21.65■■□□□ 1.06
TSPO-205ENST00000472378 PDZRN3Q9UPQ7 1066 aa21.65■■□□□ 1.06
TSPO-205ENST00000472378 GRIN3BO60391 1043 aa21.64■■□□□ 1.05
TSPO-205ENST00000472378 GOLGA2Q08379 1002 aa21.64■■□□□ 1.05
TSPO-205ENST00000472378 PDIA6Q15084 440 aa21.64■■□□□ 1.05
TSPO-205ENST00000472378 NECTIN2Q92692 538 aa21.64■■□□□ 1.05
TSPO-205ENST00000472378 SENP3-EIF4A1A0A087X0R7 540 aa21.63■■□□□ 1.05
TSPO-205ENST00000472378 TPTE2Q6XPS3 522 aa21.63■■□□□ 1.05
TSPO-205ENST00000472378 PELP1Q8IZL8 1130 aaKnown RBP21.63■■□□□ 1.05
TSPO-205ENST00000472378 CNBD1Q8NA66 436 aa21.63■■□□□ 1.05
TSPO-205ENST00000472378 NIP7Q9Y221 180 aaKnown RBP eCLIP21.63■■□□□ 1.05
TSPO-205ENST00000472378 ST5P78524 1137 aa21.62■■□□□ 1.05
TSPO-205ENST00000472378 HSP90AB3PQ58FF7 597 aa21.62■■□□□ 1.05
TSPO-205ENST00000472378 NBPF5PQ86XG9 351 aaPredicted RBP21.62■■□□□ 1.05
TSPO-205ENST00000472378 MIER1Q8N108 512 aa21.62■■□□□ 1.05
TSPO-205ENST00000472378 TSR2Q969E8 191 aaKnown RBP21.62■■□□□ 1.05
TSPO-205ENST00000472378 CHPF2Q9P2E5 772 aa21.62■■□□□ 1.05
TSPO-205ENST00000472378 ELL2O00472 640 aaPredicted RBP21.61■■□□□ 1.05
TSPO-205ENST00000472378 GIGYF2Q6Y7W6 1299 aaKnown RBP21.61■■□□□ 1.05
TSPO-205ENST00000472378 COPS6Q7L5N1 327 aa21.61■■□□□ 1.05
TSPO-205ENST00000472378 C8orf58Q8NAV2 365 aa21.61■■□□□ 1.05
TSPO-205ENST00000472378 STK31Q9BXU1 1019 aa21.61■■□□□ 1.05
TSPO-205ENST00000472378 NYXQ9GZU5 481 aa21.61■■□□□ 1.05
TSPO-205ENST00000472378 NRXN2Q9P2S2 1712 aa21.6■■□□□ 1.05
TSPO-205ENST00000472378 AFDNP55196 1824 aaKnown RBP21.6■■□□□ 1.05
TSPO-205ENST00000472378 PDE6BP35913 854 aa21.6■■□□□ 1.05
TSPO-205ENST00000472378 TWISTNBQ3B726 338 aaPredicted RBP21.6■■□□□ 1.05
TSPO-205ENST00000472378 TTLL7Q6ZT98 887 aa21.6■■□□□ 1.05
TSPO-205ENST00000472378 LRP10Q7Z4F1 713 aa21.6■■□□□ 1.05
TSPO-205ENST00000472378 BRIP1Q9BX63 1249 aa21.6■■□□□ 1.05
TSPO-205ENST00000472378 ZBTB3Q9H5J0 574 aa21.6■■□□□ 1.05
TSPO-205ENST00000472378 FANCIQ9NVI1 1328 aa21.59■■□□□ 1.05
TSPO-205ENST00000472378 GTF2E1P29083 439 aaPredicted RBP21.59■■□□□ 1.05
TSPO-205ENST00000472378 AIMP1Q12904 312 aaKnown RBP21.59■■□□□ 1.05
TSPO-205ENST00000472378 PROSER3Q2NL68 480 aa21.59■■□□□ 1.05
TSPO-205ENST00000472378 XAGE3Q8WTP9 111 aa21.59■■□□□ 1.05
TSPO-205ENST00000472378 ATP10DQ9P241 1426 aa21.59■■□□□ 1.05
TSPO-205ENST00000472378 NUP98P52948 1817 aa21.59■■□□□ 1.05
TSPO-205ENST00000472378 PXDNLA1KZ92 1463 aa21.58■■□□□ 1.05
TSPO-205ENST00000472378 A0A0G2JLW4 131 aa21.58■■□□□ 1.05
TSPO-205ENST00000472378 HLFQ16534 295 aa21.58■■□□□ 1.05
TSPO-205ENST00000472378 PARP10Q53GL7 1025 aa21.58■■□□□ 1.05
TSPO-205ENST00000472378 PIM2Q9P1W9 311 aa21.58■■□□□ 1.05
TSPO-205ENST00000472378 H0YIN7 160 aa21.57■■□□□ 1.04
TSPO-205ENST00000472378 DDX58O95786 925 aaKnown RBP21.57■■□□□ 1.04
TSPO-205ENST00000472378 ANXA1P04083 346 aa21.57■■□□□ 1.04
TSPO-205ENST00000472378 DPEP1P16444 411 aa21.57■■□□□ 1.04
TSPO-205ENST00000472378 PRR5LQ6MZQ0 368 aa21.57■■□□□ 1.04
TSPO-205ENST00000472378 ANKRD13DQ6ZTN6 518 aa21.57■■□□□ 1.04
TSPO-205ENST00000472378 PLBD2Q8NHP8 589 aa21.57■■□□□ 1.04
TSPO-205ENST00000472378 E9PSI1 815 aa21.56■■□□□ 1.04
TSPO-205ENST00000472378 PPP1R42Q7Z4L9 355 aa21.56■■□□□ 1.04
TSPO-205ENST00000472378 ZNF521Q96K83 1311 aa21.55■■□□□ 1.04
TSPO-205ENST00000472378 TSPYL6Q8N831 410 aa21.55■■□□□ 1.04
TSPO-205ENST00000472378 IBTKQ9P2D0 1353 aaPredicted RBP21.55■■□□□ 1.04
TSPO-205ENST00000472378 CACNA1FO60840 1977 aa21.54■■□□□ 1.04
TSPO-205ENST00000472378 ZNF34Q8IZ26 560 aa21.54■■□□□ 1.04
TSPO-205ENST00000472378 RNF123Q5XPI4 1314 aa21.54■■□□□ 1.04
TSPO-205ENST00000472378 N4BP2Q86UW6 1770 aaPredicted RBP21.53■■□□□ 1.04
TSPO-205ENST00000472378 TCIRG1Q13488 830 aa21.53■■□□□ 1.04
TSPO-205ENST00000472378 DALRD3Q5D0E6 543 aaKnown RBP21.53■■□□□ 1.04
TSPO-205ENST00000472378 C2CD5Q86YS7 1000 aa21.53■■□□□ 1.04
TSPO-205ENST00000472378 BCS1LQ9Y276 419 aa21.53■■□□□ 1.04
TSPO-205ENST00000472378 GPTP24298 496 aa21.52■■□□□ 1.04
TSPO-205ENST00000472378 EXOSC9Q06265 439 aaKnown RBP21.52■■□□□ 1.04
TSPO-205ENST00000472378 RIC3Q7Z5B4 369 aa21.52■■□□□ 1.04
TSPO-205ENST00000472378 CHD4Q14839 1912 aa21.51■■□□□ 1.03
TSPO-205ENST00000472378 YBX3P16989 372 aaKnown RBP eCLIP21.51■■□□□ 1.03
TSPO-205ENST00000472378 KIAA1551Q9HCM1 1747 aa21.5■■□□□ 1.03
TSPO-205ENST00000472378 FAM177BA6PVY3 158 aa21.5■■□□□ 1.03
TSPO-205ENST00000472378 VAMP4O75379 141 aa21.5■■□□□ 1.03
TSPO-205ENST00000472378 KCNA3P22001 575 aa21.5■■□□□ 1.03
TSPO-205ENST00000472378 CHRNA5P30532 468 aa21.5■■□□□ 1.03
TSPO-205ENST00000472378 TTLL6Q8N841 843 aa21.5■■□□□ 1.03
TSPO-205ENST00000472378 UTP14AQ9BVJ6 771 aaKnown RBP21.5■■□□□ 1.03
TSPO-205ENST00000472378 SLC4A2P04920 1241 aa21.49■■□□□ 1.03
TSPO-205ENST00000472378 CNKSR1Q969H4 720 aa21.49■■□□□ 1.03
TSPO-205ENST00000472378 BRCA1P38398 1863 aaKnown RBP21.48■■□□□ 1.03
TSPO-205ENST00000472378 STYK1Q6J9G0 422 aa21.48■■□□□ 1.03
TSPO-205ENST00000472378 SPINK5Q9NQ38 1064 aaPredicted RBP21.48■■□□□ 1.03
TSPO-205ENST00000472378 ANKRD36CQ5JPF3 1778 aa21.48■■□□□ 1.03
TSPO-205ENST00000472378 HSP90B1P14625 803 aaKnown RBP21.47■■□□□ 1.03
TSPO-205ENST00000472378 SUSD4Q5VX71 490 aa21.47■■□□□ 1.03
TSPO-205ENST00000472378 ZNF622Q969S3 477 aaKnown RBP eCLIP21.47■■□□□ 1.03
TSPO-205ENST00000472378 ZNF428Q96B54 188 aa21.47■■□□□ 1.03
TSPO-205ENST00000472378 MASTLQ96GX5 879 aa21.47■■□□□ 1.03
TSPO-205ENST00000472378 PHAXQ9H814 394 aaKnown RBP21.47■■□□□ 1.03
TSPO-205ENST00000472378 UBN2Q6ZU65 1347 aa21.47■■□□□ 1.03
TSPO-205ENST00000472378 RIC1Q4ADV7 1423 aa21.46■■□□□ 1.03
TSPO-205ENST00000472378 ANKRD31Q8N7Z5 1873 aa21.46■■□□□ 1.03
TSPO-205ENST00000472378 KLRG2A4D1S0 409 aaPredicted RBP21.46■■□□□ 1.03
TSPO-205ENST00000472378 SRGNP10124 158 aa21.46■■□□□ 1.03
TSPO-205ENST00000472378 NPR1P16066 1061 aa21.46■■□□□ 1.03
TSPO-205ENST00000472378 SLFN5Q08AF3 891 aa21.46■■□□□ 1.03
TSPO-205ENST00000472378 NEXNQ0ZGT2 675 aa21.46■■□□□ 1.03
TSPO-205ENST00000472378 TRIM28Q13263 835 aaKnown RBP21.46■■□□□ 1.03
TSPO-205ENST00000472378 KSR2Q6VAB6 950 aa21.46■■□□□ 1.03
TSPO-205ENST00000472378 NLRP10Q86W26 655 aa21.46■■□□□ 1.03
TSPO-205ENST00000472378 WWC3Q9ULE0 1092 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms