RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 PRAMEF22A3QJZ6 481 aa16.28■□□□□ 0.2
LINC00888-202ENST00000471496 SEC24BO95487 1268 aa16.28■□□□□ 0.2
LINC00888-202ENST00000471496 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
LINC00888-202ENST00000471496 ZBTB1Q9Y2K1 713 aa16.27■□□□□ 0.19
LINC00888-202ENST00000471496 SOS1Q07889 1333 aaPredicted RBP16.26■□□□□ 0.19
LINC00888-202ENST00000471496 TRAPPC3LQ5T215 181 aa16.26■□□□□ 0.19
LINC00888-202ENST00000471496 MSL1Q68DK7 614 aa16.26■□□□□ 0.19
LINC00888-202ENST00000471496 USP16Q9Y5T5 823 aa16.26■□□□□ 0.19
LINC00888-202ENST00000471496 EIF4A1P60842 406 aaKnown RBP16.25■□□□□ 0.19
LINC00888-202ENST00000471496 TEX13AQ9BXU3 409 aaPredicted RBP16.25■□□□□ 0.19
LINC00888-202ENST00000471496 STARD3NLO95772 234 aa16.24■□□□□ 0.19
LINC00888-202ENST00000471496 SNRPA1P09661 255 aaKnown RBP16.24■□□□□ 0.19
LINC00888-202ENST00000471496 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
LINC00888-202ENST00000471496 CHL1O00533 1208 aa16.23■□□□□ 0.19
LINC00888-202ENST00000471496 GIGYF1O75420 1035 aaPredicted RBP16.22■□□□□ 0.19
LINC00888-202ENST00000471496 A1BGP04217 495 aa16.22■□□□□ 0.19
LINC00888-202ENST00000471496 GYS1P13807 737 aa16.22■□□□□ 0.19
LINC00888-202ENST00000471496 EIF5P55010 431 aaKnown RBP16.22■□□□□ 0.19
LINC00888-202ENST00000471496 OTUD5Q96G74 571 aa16.22■□□□□ 0.19
LINC00888-202ENST00000471496 ARXQ96QS3 562 aa16.22■□□□□ 0.19
LINC00888-202ENST00000471496 TSPYL4Q9UJ04 414 aa16.22■□□□□ 0.19
LINC00888-202ENST00000471496 COL15A1P39059 1388 aa16.22■□□□□ 0.19
LINC00888-202ENST00000471496 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
LINC00888-202ENST00000471496 SENP3-EIF4A1A0A087X0R7 540 aa16.22■□□□□ 0.19
LINC00888-202ENST00000471496 CANXP27824 592 aaKnown RBP16.22■□□□□ 0.19
LINC00888-202ENST00000471496 PPP1R1BQ9UD71 204 aaPredicted RBP16.22■□□□□ 0.19
LINC00888-202ENST00000471496 SRP68Q9UHB9 627 aaKnown RBP16.22■□□□□ 0.19
LINC00888-202ENST00000471496 ZNF853P0CG23 659 aa16.21■□□□□ 0.19
LINC00888-202ENST00000471496 RFC4P35249 363 aa16.21■□□□□ 0.19
LINC00888-202ENST00000471496 SCN7AQ01118 1682 aa16.21■□□□□ 0.18
LINC00888-202ENST00000471496 BCORQ6W2J9 1755 aa16.2■□□□□ 0.18
LINC00888-202ENST00000471496 POTEFA5A3E0 1075 aa16.2■□□□□ 0.18
LINC00888-202ENST00000471496 NBPF26B4DH59 902 aa16.2■□□□□ 0.18
LINC00888-202ENST00000471496 POLD1P28340 1107 aa16.2■□□□□ 0.18
LINC00888-202ENST00000471496 PDAP1Q13442 181 aaKnown RBP16.2■□□□□ 0.18
LINC00888-202ENST00000471496 CCDC27Q2M243 656 aa16.2■□□□□ 0.18
LINC00888-202ENST00000471496 NBPF10Q6P3W6 841 aaKnown RBP16.2■□□□□ 0.18
LINC00888-202ENST00000471496 FAM9BQ8IZU0 186 aa16.2■□□□□ 0.18
LINC00888-202ENST00000471496 NBPF15Q8N660 670 aa16.2■□□□□ 0.18
LINC00888-202ENST00000471496 FHDC1Q9C0D6 1143 aaPredicted RBP16.2■□□□□ 0.18
LINC00888-202ENST00000471496 IL6STP40189 918 aaPredicted RBP16.19■□□□□ 0.18
LINC00888-202ENST00000471496 PIP4K2AP48426 406 aaPredicted RBP16.19■□□□□ 0.18
LINC00888-202ENST00000471496 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
LINC00888-202ENST00000471496 KIF13BQ9NQT8 1826 aa16.18■□□□□ 0.18
LINC00888-202ENST00000471496 PSEN1P49768 467 aa16.18■□□□□ 0.18
LINC00888-202ENST00000471496 KRT24Q2M2I5 525 aa16.18■□□□□ 0.18
LINC00888-202ENST00000471496 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
LINC00888-202ENST00000471496 BCL2L12Q9HB09 334 aa16.18■□□□□ 0.18
LINC00888-202ENST00000471496 NARFQ9UHQ1 456 aa16.18■□□□□ 0.18
LINC00888-202ENST00000471496 CCER2I3L3R5 266 aa16.17■□□□□ 0.18
LINC00888-202ENST00000471496 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
LINC00888-202ENST00000471496 WWC1Q8IX03 1113 aa16.17■□□□□ 0.18
LINC00888-202ENST00000471496 NLGN1Q8N2Q7 840 aa16.17■□□□□ 0.18
LINC00888-202ENST00000471496 SYT17Q9BSW7 474 aa16.17■□□□□ 0.18
LINC00888-202ENST00000471496 MBIPQ9NS73 344 aa16.17■□□□□ 0.18
LINC00888-202ENST00000471496 LAS1LQ9Y4W2 734 aaKnown RBP16.17■□□□□ 0.18
LINC00888-202ENST00000471496 AFDNP55196 1824 aaKnown RBP16.17■□□□□ 0.18
LINC00888-202ENST00000471496 MMP10P09238 476 aa16.16■□□□□ 0.18
LINC00888-202ENST00000471496 SCUBE2Q9NQ36 999 aa16.16■□□□□ 0.18
LINC00888-202ENST00000471496 IFT57Q9NWB7 429 aa16.16■□□□□ 0.18
LINC00888-202ENST00000471496 COLQQ9Y215 455 aaPredicted RBP16.16■□□□□ 0.18
LINC00888-202ENST00000471496 KIAA1551Q9HCM1 1747 aa16.16■□□□□ 0.18
LINC00888-202ENST00000471496 PLCG2P16885 1265 aa16.16■□□□□ 0.18
LINC00888-202ENST00000471496 GOLGA2Q08379 1002 aa16.16■□□□□ 0.18
LINC00888-202ENST00000471496 NRXN2Q9P2S2 1712 aa16.15■□□□□ 0.18
LINC00888-202ENST00000471496 TM4SF1P30408 202 aa16.15■□□□□ 0.18
LINC00888-202ENST00000471496 TBC1D2BQ9UPU7 963 aa16.15■□□□□ 0.18
LINC00888-202ENST00000471496 A0A087WZG4 1122 aa16.14■□□□□ 0.17
LINC00888-202ENST00000471496 ZPR1O75312 459 aa16.14■□□□□ 0.17
LINC00888-202ENST00000471496 CALD1Q05682 793 aaKnown RBP16.14■□□□□ 0.17
LINC00888-202ENST00000471496 DDR1Q08345 913 aa16.14■□□□□ 0.17
LINC00888-202ENST00000471496 LRP10Q7Z4F1 713 aa16.14■□□□□ 0.17
LINC00888-202ENST00000471496 CAMTA2O94983 1202 aa16.13■□□□□ 0.17
LINC00888-202ENST00000471496 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
LINC00888-202ENST00000471496 GNAI1P63096 354 aa16.13■□□□□ 0.17
LINC00888-202ENST00000471496 PDIA6Q15084 440 aa16.13■□□□□ 0.17
LINC00888-202ENST00000471496 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
LINC00888-202ENST00000471496 NUP98P52948 1817 aa16.12■□□□□ 0.17
LINC00888-202ENST00000471496 IRX5P78411 483 aaPredicted RBP16.12■□□□□ 0.17
LINC00888-202ENST00000471496 NFIXQ14938 502 aa16.12■□□□□ 0.17
LINC00888-202ENST00000471496 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
LINC00888-202ENST00000471496 SALL2Q9Y467 1007 aaPredicted RBP16.12■□□□□ 0.17
LINC00888-202ENST00000471496 ERBB4Q15303 1308 aa16.12■□□□□ 0.17
LINC00888-202ENST00000471496 GOLGB1Q14789 3259 aaKnown RBP16.11■□□□□ 0.17
LINC00888-202ENST00000471496 POLRMTO00411 1230 aaKnown RBP16.11■□□□□ 0.17
LINC00888-202ENST00000471496 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
LINC00888-202ENST00000471496 OCEL1Q9H607 264 aa16.11■□□□□ 0.17
LINC00888-202ENST00000471496 IL16Q14005 1332 aa16.11■□□□□ 0.17
LINC00888-202ENST00000471496 C10orf71Q711Q0 1435 aa16.11■□□□□ 0.17
LINC00888-202ENST00000471496 EIF2S2P20042 333 aaKnown RBP16.1■□□□□ 0.17
LINC00888-202ENST00000471496 PROSER3Q2NL68 480 aa16.1■□□□□ 0.17
LINC00888-202ENST00000471496 CD2APQ9Y5K6 639 aa16.1■□□□□ 0.17
LINC00888-202ENST00000471496 ZNF521Q96K83 1311 aa16.1■□□□□ 0.17
LINC00888-202ENST00000471496 N4BP2Q86UW6 1770 aaPredicted RBP16.1■□□□□ 0.17
LINC00888-202ENST00000471496 HOXB7P09629 217 aa16.1■□□□□ 0.17
LINC00888-202ENST00000471496 MKRN3Q13064 507 aaKnown RBP16.1■□□□□ 0.17
LINC00888-202ENST00000471496 DUSP27Q5VZP5 1158 aa16.1■□□□□ 0.17
LINC00888-202ENST00000471496 TBC1D9BQ66K14 1250 aa16.1■□□□□ 0.17
LINC00888-202ENST00000471496 WDR63Q8IWG1 891 aa16.1■□□□□ 0.17
LINC00888-202ENST00000471496 C8orf58Q8NAV2 365 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms