RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 ZPR1O75312 459 aa10.03□□□□□ -0.8
TRIM59-204ENST00000471396 USP16Q9Y5T5 823 aa10.03□□□□□ -0.8
TRIM59-204ENST00000471396 C10orf71Q711Q0 1435 aa10.02□□□□□ -0.81
TRIM59-204ENST00000471396 BCORQ6W2J9 1755 aa10.02□□□□□ -0.81
TRIM59-204ENST00000471396 GIGYF1O75420 1035 aaPredicted RBP10.02□□□□□ -0.81
TRIM59-204ENST00000471396 USPL1Q5W0Q7 1092 aa10.02□□□□□ -0.81
TRIM59-204ENST00000471396 NPM2Q86SE8 214 aaKnown RBP10.02□□□□□ -0.81
TRIM59-204ENST00000471396 ZNF330Q9Y3S2 320 aaPredicted RBP10.02□□□□□ -0.81
TRIM59-204ENST00000471396 CD2APQ9Y5K6 639 aa10.02□□□□□ -0.81
TRIM59-204ENST00000471396 KIF13BQ9NQT8 1826 aa10.02□□□□□ -0.81
TRIM59-204ENST00000471396 CHL1O00533 1208 aa10.01□□□□□ -0.81
TRIM59-204ENST00000471396 CALD1Q05682 793 aaKnown RBP10.01□□□□□ -0.81
TRIM59-204ENST00000471396 NLGN2Q8NFZ4 835 aa10.01□□□□□ -0.81
TRIM59-204ENST00000471396 TSPYL2Q9H2G4 693 aaPredicted RBP10.01□□□□□ -0.81
TRIM59-204ENST00000471396 BCL2L12Q9HB09 334 aa10.01□□□□□ -0.81
TRIM59-204ENST00000471396 PARP3Q9Y6F1 533 aa10.01□□□□□ -0.81
TRIM59-204ENST00000471396 NBPF26B4DH59 902 aa10□□□□□ -0.81
TRIM59-204ENST00000471396 PIP4K2AP48426 406 aaPredicted RBP10□□□□□ -0.81
TRIM59-204ENST00000471396 DDR1Q08345 913 aa10□□□□□ -0.81
TRIM59-204ENST00000471396 NBPF10Q6P3W6 841 aaKnown RBP10□□□□□ -0.81
TRIM59-204ENST00000471396 NBPF15Q8N660 670 aa10□□□□□ -0.81
TRIM59-204ENST00000471396 RNF25Q96BH1 459 aaPredicted RBP10□□□□□ -0.81
TRIM59-204ENST00000471396 CFAP44Q96MT7 982 aa10□□□□□ -0.81
TRIM59-204ENST00000471396 LAS1LQ9Y4W2 734 aaKnown RBP10□□□□□ -0.81
TRIM59-204ENST00000471396 ERBB4Q15303 1308 aa10□□□□□ -0.81
TRIM59-204ENST00000471396 POLRMTO00411 1230 aaKnown RBP9.99□□□□□ -0.81
TRIM59-204ENST00000471396 NFIXQ14938 502 aa9.99□□□□□ -0.81
TRIM59-204ENST00000471396 CCDC27Q2M243 656 aa9.99□□□□□ -0.81
TRIM59-204ENST00000471396 DZIP3Q86Y13 1208 aaKnown RBP9.99□□□□□ -0.81
TRIM59-204ENST00000471396 IFT57Q9NWB7 429 aa9.99□□□□□ -0.81
TRIM59-204ENST00000471396 TBC1D2BQ9UPU7 963 aa9.99□□□□□ -0.81
TRIM59-204ENST00000471396 KIAA1551Q9HCM1 1747 aa9.99□□□□□ -0.81
TRIM59-204ENST00000471396 NRXN2Q9P2S2 1712 aa9.99□□□□□ -0.81
TRIM59-204ENST00000471396 PXDNLA1KZ92 1463 aa9.98□□□□□ -0.81
TRIM59-204ENST00000471396 AFDNP55196 1824 aaKnown RBP9.98□□□□□ -0.81
TRIM59-204ENST00000471396 CAMTA2O94983 1202 aa9.98□□□□□ -0.81
TRIM59-204ENST00000471396 ZNF853P0CG23 659 aa9.98□□□□□ -0.81
TRIM59-204ENST00000471396 TM4SF1P30408 202 aa9.98□□□□□ -0.81
TRIM59-204ENST00000471396 GNAI1P63096 354 aa9.98□□□□□ -0.81
TRIM59-204ENST00000471396 HOXB7P09629 217 aa9.97□□□□□ -0.81
TRIM59-204ENST00000471396 PYGBP11216 843 aa9.97□□□□□ -0.81
TRIM59-204ENST00000471396 KRT24Q2M2I5 525 aa9.97□□□□□ -0.81
TRIM59-204ENST00000471396 FAM9BQ8IZU0 186 aa9.97□□□□□ -0.81
TRIM59-204ENST00000471396 MBIPQ9NS73 344 aa9.97□□□□□ -0.81
TRIM59-204ENST00000471396 ZNF652Q9Y2D9 606 aa9.97□□□□□ -0.81
TRIM59-204ENST00000471396 CARMIL3Q8ND23 1372 aa9.97□□□□□ -0.81
TRIM59-204ENST00000471396 UTRNP46939 3433 aa9.96□□□□□ -0.81
TRIM59-204ENST00000471396 CHRM1P11229 460 aaPredicted RBP9.96□□□□□ -0.82
TRIM59-204ENST00000471396 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
TRIM59-204ENST00000471396 EIF2S2P20042 333 aaKnown RBP9.96□□□□□ -0.82
TRIM59-204ENST00000471396 TBC1D9BQ66K14 1250 aa9.96□□□□□ -0.82
TRIM59-204ENST00000471396 WWC1Q8IX03 1113 aa9.96□□□□□ -0.82
TRIM59-204ENST00000471396 N4BP2Q86UW6 1770 aaPredicted RBP9.96□□□□□ -0.82
TRIM59-204ENST00000471396 SENP3-EIF4A1A0A087X0R7 540 aa9.95□□□□□ -0.82
TRIM59-204ENST00000471396 CCER2I3L3R5 266 aa9.95□□□□□ -0.82
TRIM59-204ENST00000471396 SERPINB2P05120 415 aa9.95□□□□□ -0.82
TRIM59-204ENST00000471396 MYL6BP14649 208 aa9.95□□□□□ -0.82
TRIM59-204ENST00000471396 TGFB2P61812 414 aa9.95□□□□□ -0.82
TRIM59-204ENST00000471396 PDIA6Q15084 440 aa9.95□□□□□ -0.82
TRIM59-204ENST00000471396 GPR162Q16538 588 aa9.95□□□□□ -0.82
TRIM59-204ENST00000471396 CLEC4GQ6UXB4 293 aa9.95□□□□□ -0.82
TRIM59-204ENST00000471396 KIF6Q6ZMV9 814 aa9.95□□□□□ -0.82
TRIM59-204ENST00000471396 BICDL1Q6ZP65 573 aa9.95□□□□□ -0.82
TRIM59-204ENST00000471396 PELP1Q8IZL8 1130 aaKnown RBP9.95□□□□□ -0.82
TRIM59-204ENST00000471396 IL16Q14005 1332 aa9.95□□□□□ -0.82
TRIM59-204ENST00000471396 BRCA1P38398 1863 aaKnown RBP9.95□□□□□ -0.82
TRIM59-204ENST00000471396 GOLGB1Q14789 3259 aaKnown RBP9.94□□□□□ -0.82
TRIM59-204ENST00000471396 CHD4Q14839 1912 aa9.94□□□□□ -0.82
TRIM59-204ENST00000471396 ATP10DQ9P241 1426 aa9.94□□□□□ -0.82
TRIM59-204ENST00000471396 MAP3K15Q6ZN16 1313 aa9.94□□□□□ -0.82
TRIM59-204ENST00000471396 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
TRIM59-204ENST00000471396 YBX3P16989 372 aaKnown RBP eCLIP9.94□□□□□ -0.82
TRIM59-204ENST00000471396 PROSER3Q2NL68 480 aa9.94□□□□□ -0.82
TRIM59-204ENST00000471396 HDGFL1Q5TGJ6 251 aa9.94□□□□□ -0.82
TRIM59-204ENST00000471396 DUSP27Q5VZP5 1158 aa9.94□□□□□ -0.82
TRIM59-204ENST00000471396 TTLL7Q6ZT98 887 aa9.94□□□□□ -0.82
TRIM59-204ENST00000471396 LRP10Q7Z4F1 713 aa9.94□□□□□ -0.82
TRIM59-204ENST00000471396 NGEFQ8N5V2 710 aa9.94□□□□□ -0.82
TRIM59-204ENST00000471396 SETDB2Q96T68 719 aa9.94□□□□□ -0.82
TRIM59-204ENST00000471396 DDX21Q9NR30 783 aaKnown RBP eCLIP9.94□□□□□ -0.82
TRIM59-204ENST00000471396 NUP98P52948 1817 aa9.93□□□□□ -0.82
TRIM59-204ENST00000471396 ERVV-1B6SEH8 477 aa9.93□□□□□ -0.82
TRIM59-204ENST00000471396 GRIN3BO60391 1043 aa9.93□□□□□ -0.82
TRIM59-204ENST00000471396 ANXA1P04083 346 aa9.93□□□□□ -0.82
TRIM59-204ENST00000471396 DPEP1P16444 411 aa9.93□□□□□ -0.82
TRIM59-204ENST00000471396 CNBD1Q8NA66 436 aa9.93□□□□□ -0.82
TRIM59-204ENST00000471396 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
TRIM59-204ENST00000471396 TSR2Q969E8 191 aaKnown RBP9.93□□□□□ -0.82
TRIM59-204ENST00000471396 CHPF2Q9P2E5 772 aa9.93□□□□□ -0.82
TRIM59-204ENST00000471396 NIP7Q9Y221 180 aaKnown RBP eCLIP9.93□□□□□ -0.82
TRIM59-204ENST00000471396 ANKRD31Q8N7Z5 1873 aa9.93□□□□□ -0.82
TRIM59-204ENST00000471396 DLEC1Q9Y238 1755 aa9.93□□□□□ -0.82
TRIM59-204ENST00000471396 A0A0G2JLW4 131 aa9.92□□□□□ -0.82
TRIM59-204ENST00000471396 PLCB2Q00722 1185 aa9.92□□□□□ -0.82
TRIM59-204ENST00000471396 HLFQ16534 295 aa9.92□□□□□ -0.82
TRIM59-204ENST00000471396 PRR5LQ6MZQ0 368 aa9.92□□□□□ -0.82
TRIM59-204ENST00000471396 WDR63Q8IWG1 891 aa9.92□□□□□ -0.82
TRIM59-204ENST00000471396 BBXQ8WY36 941 aaPredicted RBP9.92□□□□□ -0.82
TRIM59-204ENST00000471396 ZBTB3Q9H5J0 574 aa9.92□□□□□ -0.82
TRIM59-204ENST00000471396 DBF4Q9UBU7 674 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms