RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SERTM1A2A2V5 107 aa8.07□□□□□ -1.12
COL9A1-206ENST00000470652 K7ELQ4 463 aaPredicted RBP8.07□□□□□ -1.12
COL9A1-206ENST00000470652 SUPT5HO00267 1087 aaKnown RBP8.07□□□□□ -1.12
COL9A1-206ENST00000470652 TATP17735 454 aaPredicted RBP8.07□□□□□ -1.12
COL9A1-206ENST00000470652 KLRG1Q96E93 195 aa8.07□□□□□ -1.12
COL9A1-206ENST00000470652 CRISPLD1Q9H336 500 aa8.07□□□□□ -1.12
COL9A1-206ENST00000470652 MKL2Q9ULH7 1088 aa8.07□□□□□ -1.12
COL9A1-206ENST00000470652 ZNF232Q9UNY5 417 aa8.07□□□□□ -1.12
COL9A1-206ENST00000470652 PARP3Q9Y6F1 533 aa8.07□□□□□ -1.12
COL9A1-206ENST00000470652 ATAD2Q6PL18 1390 aa8.07□□□□□ -1.12
COL9A1-206ENST00000470652 KRBA1A5PL33 1030 aa8.06□□□□□ -1.12
COL9A1-206ENST00000470652 SHISA8B8ZZ34 492 aa8.06□□□□□ -1.12
COL9A1-206ENST00000470652 PPP1R15AO75807 674 aaPredicted RBP8.06□□□□□ -1.12
COL9A1-206ENST00000470652 EFHC2Q5JST6 749 aa8.06□□□□□ -1.12
COL9A1-206ENST00000470652 STAG2Q8N3U4 1231 aa8.06□□□□□ -1.12
COL9A1-206ENST00000470652 ZDHHC1Q8WTX9 485 aa8.06□□□□□ -1.12
COL9A1-206ENST00000470652 PHF24Q9UPV7 400 aa8.06□□□□□ -1.12
COL9A1-206ENST00000470652 C21orf2O43822 256 aa8.05□□□□□ -1.12
COL9A1-206ENST00000470652 PPP1R12BO60237 982 aaPredicted RBP8.05□□□□□ -1.12
COL9A1-206ENST00000470652 THBS1P07996 1170 aa8.05□□□□□ -1.12
COL9A1-206ENST00000470652 ATP4AP20648 1035 aa8.05□□□□□ -1.12
COL9A1-206ENST00000470652 BAG6P46379 1132 aa8.05□□□□□ -1.12
COL9A1-206ENST00000470652 SWI5Q1ZZU3 235 aa8.05□□□□□ -1.12
COL9A1-206ENST00000470652 POTEAQ6S8J7 498 aa8.05□□□□□ -1.12
COL9A1-206ENST00000470652 C1orf229Q6ZS94 237 aaPredicted RBP8.05□□□□□ -1.12
COL9A1-206ENST00000470652 EDARADDQ8WWZ3 215 aa8.05□□□□□ -1.12
COL9A1-206ENST00000470652 SCG3Q8WXD2 468 aaKnown RBP8.05□□□□□ -1.12
COL9A1-206ENST00000470652 RUBCNLQ9H714 662 aa8.05□□□□□ -1.12
COL9A1-206ENST00000470652 ACIN1Q9UKV3 1341 aaKnown RBP8.04□□□□□ -1.12
COL9A1-206ENST00000470652 EML1O00423 815 aa8.04□□□□□ -1.12
COL9A1-206ENST00000470652 HIRAP54198 1017 aaPredicted RBP8.04□□□□□ -1.12
COL9A1-206ENST00000470652 ARSJQ5FYB0 599 aaPredicted RBP8.04□□□□□ -1.12
COL9A1-206ENST00000470652 ZMIZ1Q9ULJ6 1067 aa8.04□□□□□ -1.12
COL9A1-206ENST00000470652 FURINP09958 794 aa8.03□□□□□ -1.12
COL9A1-206ENST00000470652 IGFBP4P22692 258 aa8.03□□□□□ -1.12
COL9A1-206ENST00000470652 FIGNL1Q6PIW4 674 aa8.03□□□□□ -1.12
COL9A1-206ENST00000470652 NLRP8Q86W28 1048 aa8.03□□□□□ -1.12
COL9A1-206ENST00000470652 CHMP7Q8WUX9 453 aaPredicted RBP8.03□□□□□ -1.12
COL9A1-206ENST00000470652 C2orf49Q9BVC5 232 aaPredicted RBP8.03□□□□□ -1.12
COL9A1-206ENST00000470652 GDF2Q9UK05 429 aaPredicted RBP8.03□□□□□ -1.12
COL9A1-206ENST00000470652 GPC6Q9Y625 555 aaPredicted RBP8.03□□□□□ -1.12
COL9A1-206ENST00000470652 A0A1W2PNR3 127 aa8.02□□□□□ -1.13
COL9A1-206ENST00000470652 AMPD1P23109 780 aa8.02□□□□□ -1.13
COL9A1-206ENST00000470652 COL8A1P27658 744 aa8.02□□□□□ -1.13
COL9A1-206ENST00000470652 WEE1P30291 646 aa8.02□□□□□ -1.13
COL9A1-206ENST00000470652 TXLNAP40222 546 aa8.02□□□□□ -1.13
COL9A1-206ENST00000470652 C1orf53Q5VUE5 145 aa8.02□□□□□ -1.13
COL9A1-206ENST00000470652 BICDL1Q6ZP65 573 aa8.02□□□□□ -1.13
COL9A1-206ENST00000470652 ZIC5Q96T25 663 aa8.02□□□□□ -1.13
COL9A1-206ENST00000470652 LGR5O75473 907 aa8.01□□□□□ -1.13
COL9A1-206ENST00000470652 SH3PXD2AQ5TCZ1 1133 aa8.01□□□□□ -1.13
COL9A1-206ENST00000470652 ALYREFQ86V81 257 aaKnown RBP8.01□□□□□ -1.13
COL9A1-206ENST00000470652 STK32AQ8WU08 396 aa8.01□□□□□ -1.13
COL9A1-206ENST00000470652 HCN4Q9Y3Q4 1203 aa8.01□□□□□ -1.13
COL9A1-206ENST00000470652 BMP4P12644 408 aa8□□□□□ -1.13
COL9A1-206ENST00000470652 FAM69CQ0P6D2 419 aa8□□□□□ -1.13
COL9A1-206ENST00000470652 UBAP2LQ14157 1087 aaKnown RBP8□□□□□ -1.13
COL9A1-206ENST00000470652 GRIN2CQ14957 1233 aa8□□□□□ -1.13
COL9A1-206ENST00000470652 GOLGA6L1Q8N7Z2 621 aa8□□□□□ -1.13
COL9A1-206ENST00000470652 ZCCHC2Q9C0B9 1178 aaKnown RBP8□□□□□ -1.13
COL9A1-206ENST00000470652 GJA3Q9Y6H8 435 aa8□□□□□ -1.13
COL9A1-206ENST00000470652 C2CD2LO14523 706 aa7.99□□□□□ -1.13
COL9A1-206ENST00000470652 FOXO3O43524 673 aa7.99□□□□□ -1.13
COL9A1-206ENST00000470652 TMEM164Q5U3C3 297 aa7.99□□□□□ -1.13
COL9A1-206ENST00000470652 C7orf43Q8WVR3 580 aa7.99□□□□□ -1.13
COL9A1-206ENST00000470652 ABHD17AQ96GS6 310 aa7.99□□□□□ -1.13
COL9A1-206ENST00000470652 PHACTR1Q9C0D0 580 aa7.99□□□□□ -1.13
COL9A1-206ENST00000470652 NEUROD4Q9HD90 331 aa7.99□□□□□ -1.13
COL9A1-206ENST00000470652 PCDHGC4Q9Y5F7 938 aa7.99□□□□□ -1.13
COL9A1-206ENST00000470652 CTBSQ01459 385 aa7.98□□□□□ -1.13
COL9A1-206ENST00000470652 LINC00114Q6XXX2 140 aa7.98□□□□□ -1.13
COL9A1-206ENST00000470652 ALDH16A1Q8IZ83 802 aa7.98□□□□□ -1.13
COL9A1-206ENST00000470652 RHPN1Q8TCX5 695 aa7.98□□□□□ -1.13
COL9A1-206ENST00000470652 ARID3AQ99856 593 aa7.98□□□□□ -1.13
COL9A1-206ENST00000470652 SUV39H2Q9H5I1 410 aa7.98□□□□□ -1.13
COL9A1-206ENST00000470652 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.98□□□□□ -1.13
COL9A1-206ENST00000470652 ANKIB1Q9P2G1 1089 aa7.98□□□□□ -1.13
COL9A1-206ENST00000470652 GGA1Q9UJY5 639 aa7.98□□□□□ -1.13
COL9A1-206ENST00000470652 ATXN7L1Q9ULK2 861 aaPredicted RBP7.98□□□□□ -1.13
COL9A1-206ENST00000470652 ATXN7O15265 892 aaPredicted RBP7.97□□□□□ -1.13
COL9A1-206ENST00000470652 BNIP3LO60238 219 aa7.97□□□□□ -1.13
COL9A1-206ENST00000470652 HIF1AQ16665 826 aa7.97□□□□□ -1.13
COL9A1-206ENST00000470652 Q8N3U1 123 aa7.97□□□□□ -1.13
COL9A1-206ENST00000470652 CLP1Q92989 425 aaKnown RBP7.97□□□□□ -1.13
COL9A1-206ENST00000470652 VTI1AQ96AJ9 217 aa7.97□□□□□ -1.13
COL9A1-206ENST00000470652 NDFIP2Q9NV92 336 aa7.97□□□□□ -1.13
COL9A1-206ENST00000470652 PRMT3O60678 531 aa7.96□□□□□ -1.14
COL9A1-206ENST00000470652 HOXB4P17483 251 aaPredicted RBP7.96□□□□□ -1.14
COL9A1-206ENST00000470652 FGFR3P22607 806 aa7.96□□□□□ -1.14
COL9A1-206ENST00000470652 SAMD5Q5TGI4 173 aa7.96□□□□□ -1.14
COL9A1-206ENST00000470652 NGLY1Q96IV0 654 aa7.96□□□□□ -1.14
COL9A1-206ENST00000470652 BTBD6Q96KE9 485 aa7.96□□□□□ -1.14
COL9A1-206ENST00000470652 PRIMPOLQ96LW4 560 aa7.96□□□□□ -1.14
COL9A1-206ENST00000470652 C1QTNF9BB2RNN3 333 aa7.95□□□□□ -1.14
COL9A1-206ENST00000470652 PIK3R2O00459 728 aa7.95□□□□□ -1.14
COL9A1-206ENST00000470652 OCLNQ16625 522 aa7.95□□□□□ -1.14
COL9A1-206ENST00000470652 RTN1Q16799 776 aa7.95□□□□□ -1.14
COL9A1-206ENST00000470652 LRRC69Q6ZNQ3 347 aa7.95□□□□□ -1.14
COL9A1-206ENST00000470652 GNB5O14775 395 aa7.94□□□□□ -1.14
COL9A1-206ENST00000470652 FAM157BP0CG42 384 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms