RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 LRP10Q7Z4F1 713 aa18.43■□□□□ 0.54
TOP3B-215ENST00000470338 ARFGEF1Q9Y6D6 1849 aa18.42■□□□□ 0.54
TOP3B-215ENST00000470338 ERVV-1B6SEH8 477 aa18.42■□□□□ 0.54
TOP3B-215ENST00000470338 HOXB7P09629 217 aa18.42■□□□□ 0.54
TOP3B-215ENST00000470338 NGEFQ8N5V2 710 aa18.42■□□□□ 0.54
TOP3B-215ENST00000470338 DLEC1Q9Y238 1755 aa18.42■□□□□ 0.54
TOP3B-215ENST00000470338 HLFQ16534 295 aa18.41■□□□□ 0.54
TOP3B-215ENST00000470338 TTLL7Q6ZT98 887 aa18.41■□□□□ 0.54
TOP3B-215ENST00000470338 WWC1Q8IX03 1113 aa18.41■□□□□ 0.54
TOP3B-215ENST00000470338 WWC3Q9ULE0 1092 aa18.41■□□□□ 0.54
TOP3B-215ENST00000470338 MAP3K15Q6ZN16 1313 aa18.41■□□□□ 0.54
TOP3B-215ENST00000470338 PRR5LQ6MZQ0 368 aa18.4■□□□□ 0.54
TOP3B-215ENST00000470338 PIM2Q9P1W9 311 aa18.4■□□□□ 0.54
TOP3B-215ENST00000470338 CHRNA5P30532 468 aa18.39■□□□□ 0.53
TOP3B-215ENST00000470338 PROSER3Q2NL68 480 aa18.39■□□□□ 0.53
TOP3B-215ENST00000470338 DUSP27Q5VZP5 1158 aa18.39■□□□□ 0.53
TOP3B-215ENST00000470338 KIF6Q6ZMV9 814 aa18.39■□□□□ 0.53
TOP3B-215ENST00000470338 FAM9BQ8IZU0 186 aa18.39■□□□□ 0.53
TOP3B-215ENST00000470338 DDX21Q9NR30 783 aaKnown RBP eCLIP18.39■□□□□ 0.53
TOP3B-215ENST00000470338 SENP3-EIF4A1A0A087X0R7 540 aa18.38■□□□□ 0.53
TOP3B-215ENST00000470338 NECTIN2Q92692 538 aa18.38■□□□□ 0.53
TOP3B-215ENST00000470338 BRIP1Q9BX63 1249 aa18.38■□□□□ 0.53
TOP3B-215ENST00000470338 NIP7Q9Y221 180 aaKnown RBP eCLIP18.38■□□□□ 0.53
TOP3B-215ENST00000470338 BCS1LQ9Y276 419 aa18.38■□□□□ 0.53
TOP3B-215ENST00000470338 ANXA1P04083 346 aa18.37■□□□□ 0.53
TOP3B-215ENST00000470338 CNBD1Q8NA66 436 aa18.37■□□□□ 0.53
TOP3B-215ENST00000470338 IL16Q14005 1332 aa18.37■□□□□ 0.53
TOP3B-215ENST00000470338 HDGFL1Q5TGJ6 251 aa18.36■□□□□ 0.53
TOP3B-215ENST00000470338 GIGYF2Q6Y7W6 1299 aaKnown RBP18.36■□□□□ 0.53
TOP3B-215ENST00000470338 NBPF5PQ86XG9 351 aaPredicted RBP18.36■□□□□ 0.53
TOP3B-215ENST00000470338 ZBTB3Q9H5J0 574 aa18.36■□□□□ 0.53
TOP3B-215ENST00000470338 ATP10DQ9P241 1426 aa18.36■□□□□ 0.53
TOP3B-215ENST00000470338 PDZRN3Q9UPQ7 1066 aa18.36■□□□□ 0.53
TOP3B-215ENST00000470338 H0YIN7 160 aa18.35■□□□□ 0.53
TOP3B-215ENST00000470338 PDE6BP35913 854 aa18.35■□□□□ 0.53
TOP3B-215ENST00000470338 DALRD3Q5D0E6 543 aaKnown RBP18.35■□□□□ 0.53
TOP3B-215ENST00000470338 TPTE2Q6XPS3 522 aa18.35■□□□□ 0.53
TOP3B-215ENST00000470338 COPS6Q7L5N1 327 aa18.35■□□□□ 0.53
TOP3B-215ENST00000470338 C2CD5Q86YS7 1000 aa18.35■□□□□ 0.53
TOP3B-215ENST00000470338 CCDC24Q8N4L8 307 aa18.35■□□□□ 0.53
TOP3B-215ENST00000470338 CHPF2Q9P2E5 772 aa18.35■□□□□ 0.53
TOP3B-215ENST00000470338 DBF4Q9UBU7 674 aaPredicted RBP18.35■□□□□ 0.53
TOP3B-215ENST00000470338 COL11A2P13942 1736 aaPredicted RBP18.35■□□□□ 0.53
TOP3B-215ENST00000470338 ST5P78524 1137 aa18.34■□□□□ 0.53
TOP3B-215ENST00000470338 WDR63Q8IWG1 891 aa18.34■□□□□ 0.53
TOP3B-215ENST00000470338 ZNF34Q8IZ26 560 aa18.34■□□□□ 0.53
TOP3B-215ENST00000470338 C8orf58Q8NAV2 365 aa18.34■□□□□ 0.53
TOP3B-215ENST00000470338 XAGE3Q8WTP9 111 aa18.34■□□□□ 0.53
TOP3B-215ENST00000470338 ANKRD36CQ5JPF3 1778 aa18.34■□□□□ 0.53
TOP3B-215ENST00000470338 ELL2O00472 640 aaPredicted RBP18.32■□□□□ 0.52
TOP3B-215ENST00000470338 NPHP1O15259 732 aa18.32■□□□□ 0.52
TOP3B-215ENST00000470338 TSR2Q969E8 191 aaKnown RBP18.32■□□□□ 0.52
TOP3B-215ENST00000470338 HYPKQ9NX55 129 aa18.32■□□□□ 0.52
TOP3B-215ENST00000470338 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
TOP3B-215ENST00000470338 UBN2Q6ZU65 1347 aa18.31■□□□□ 0.52
TOP3B-215ENST00000470338 KLRG2A4D1S0 409 aaPredicted RBP18.31■□□□□ 0.52
TOP3B-215ENST00000470338 CCER2I3L3R5 266 aa18.31■□□□□ 0.52
TOP3B-215ENST00000470338 AIMP1Q12904 312 aaKnown RBP18.31■□□□□ 0.52
TOP3B-215ENST00000470338 TTLL6Q8N841 843 aa18.31■□□□□ 0.52
TOP3B-215ENST00000470338 NYXQ9GZU5 481 aa18.31■□□□□ 0.52
TOP3B-215ENST00000470338 SBF1O95248 1867 aa18.31■□□□□ 0.52
TOP3B-215ENST00000470338 IBTKQ9P2D0 1353 aaPredicted RBP18.3■□□□□ 0.52
TOP3B-215ENST00000470338 FAM177BA6PVY3 158 aa18.3■□□□□ 0.52
TOP3B-215ENST00000470338 GPTP24298 496 aa18.3■□□□□ 0.52
TOP3B-215ENST00000470338 ARHGAP27Q6ZUM4 889 aa18.3■□□□□ 0.52
TOP3B-215ENST00000470338 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
TOP3B-215ENST00000470338 CHMP4AQ9BY43 222 aa18.3■□□□□ 0.52
TOP3B-215ENST00000470338 CACNA1SQ13698 1873 aa18.3■□□□□ 0.52
TOP3B-215ENST00000470338 ARFGEF2Q9Y6D5 1785 aa18.3■□□□□ 0.52
TOP3B-215ENST00000470338 SRGNP10124 158 aa18.29■□□□□ 0.52
TOP3B-215ENST00000470338 PARP10Q53GL7 1025 aa18.29■□□□□ 0.52
TOP3B-215ENST00000470338 SUSD4Q5VX71 490 aa18.29■□□□□ 0.52
TOP3B-215ENST00000470338 ZNF784Q8NCA9 323 aaPredicted RBP18.29■□□□□ 0.52
TOP3B-215ENST00000470338 CACNA1FO60840 1977 aa18.29■□□□□ 0.52
TOP3B-215ENST00000470338 SLX4Q8IY92 1834 aa18.28■□□□□ 0.52
TOP3B-215ENST00000470338 GTF2E1P29083 439 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-215ENST00000470338 TCIRG1Q13488 830 aa18.28■□□□□ 0.52
TOP3B-215ENST00000470338 HSP90AB3PQ58FF7 597 aa18.28■□□□□ 0.52
TOP3B-215ENST00000470338 STYK1Q6J9G0 422 aa18.28■□□□□ 0.52
TOP3B-215ENST00000470338 ANKRD13DQ6ZTN6 518 aa18.28■□□□□ 0.52
TOP3B-215ENST00000470338 PLBD2Q8NHP8 589 aa18.28■□□□□ 0.52
TOP3B-215ENST00000470338 ZNF622Q969S3 477 aaKnown RBP eCLIP18.28■□□□□ 0.521e-13■□□□□ 9.1
TOP3B-215ENST00000470338 NTSR2O95665 410 aa18.27■□□□□ 0.52
TOP3B-215ENST00000470338 CCDC30Q5VVM6 783 aa18.27■□□□□ 0.52
TOP3B-215ENST00000470338 PPP1R42Q7Z4L9 355 aa18.27■□□□□ 0.52
TOP3B-215ENST00000470338 MASTLQ96GX5 879 aa18.27■□□□□ 0.52
TOP3B-215ENST00000470338 CCDC88AQ3V6T2 1871 aa18.26■□□□□ 0.51
TOP3B-215ENST00000470338 FANCIQ9NVI1 1328 aa18.26■□□□□ 0.51
TOP3B-215ENST00000470338 RIC1Q4ADV7 1423 aa18.26■□□□□ 0.51
TOP3B-215ENST00000470338 TNRC6CQ9HCJ0 1690 aaKnown RBP18.26■□□□□ 0.51
TOP3B-215ENST00000470338 ERFEQ4G0M1 354 aa18.26■□□□□ 0.51
TOP3B-215ENST00000470338 NUTM1Q86Y26 1132 aa18.26■□□□□ 0.51
TOP3B-215ENST00000470338 CNKSR1Q969H4 720 aa18.26■□□□□ 0.51
TOP3B-215ENST00000470338 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
TOP3B-215ENST00000470338 ADCY9O60503 1353 aa18.26■□□□□ 0.51
TOP3B-215ENST00000470338 ZNF521Q96K83 1311 aa18.25■□□□□ 0.51
TOP3B-215ENST00000470338 NPR1P16066 1061 aa18.25■□□□□ 0.51
TOP3B-215ENST00000470338 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
TOP3B-215ENST00000470338 SPINK5Q9NQ38 1064 aaPredicted RBP18.25■□□□□ 0.51
TOP3B-215ENST00000470338 ABCC12Q96J65 1359 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms